Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d015293_T017
CDS Infomation

cds chromosome:B73_RefGen_v4:5:82992385:82999637:-1 gene:Zm00001d015293 gene_biotype:protein_coding transcript_biotype:protein_coding description:VIN3-like protein 2
Sequence

ATGGATCCCCCACGCGGAGGAACAGTGATTGATCCTACTAAATGTCGATTGATGAGTGTG
GATGAAAAGCGAGAACTTGTTCGTGATTTATCAAAGAGCCCAGAAAGCGCTCCTGACAGG
CTCCAGTCATGGACACGGCGGGAAATTGTAGAGATTCTTTGTTCTGATCTTGGAAGGGAG
AGGAAATATACTGGTTTATCCAAGCAGAGAATGCTAGATTATCTCTTCAGGGTGGTGTCT
CGAAAATCATCTGGTCCAGTGGAACATGTACATGAGAAAGAGAAAGGGAAAGATAAAGAG
TCAATTCTTGAGCCCAATACAACTAACCATCAGTCCCCTGCCAAACGACCGAGAAAGAGT
GACAATCCATCACGATTACCGATTATCACAAACAACTCAGCAGCATCTGATGTAACTGGG
CCAACTAATAATCTACGCTTCTGCCAAAATTTAGCTTGCAGGGCTATTCTCAGGGACAAT
TTTTGCAGACGCTGTTCATGCTGCATTTGTTTTAGTTACGATGATAACAAGGACCCAAGC
CTCTGGTTGTCGTGTAGTTCAGACCAACACTTACAAAAGGATACCTGTGGTTTCTCATGC
CATCTTGAATGTGCTCTAAAGGATGAAAGAACGGGTATTCTGCAGAGTGGACAAGGCAAG
AAACTTGATGGTGGCTATTATTGCATTCGCTGTTGGAAACAGAATGATTTGCTTGGGTGC
TGGAAGAAACAGCTGGTGATAGCAAAAGATGCTCGACGATTGGATGTATTGTGTCATCGG
ATTTATCTCAGTCATAGGATCCTTGTCTCCACAGAGAAGTACTTGGTATTGCATGATATT
GTTGATACGGCATTGAAGAAACTGGAGGCTGAGGTCGGTCCTTTATCTGGAGCTCCAAAT
ATGGGTCGTGGAATTGTCAGTCGACTTACTGTTGGTGCCGAAGTTCAGAAACTTTGTGCT
CAAGCAGTAGATGCTGTGGAATCATTGTTCTCGGGTGTATCTCCTGCTAGTTCAAAAATT
CAGCGGCCATGCATGATGCGACCAAACTTTGTAAAGTTTGAAGCTATAACCCAAACATCC
GTCATGGTATTTTTGGATTTGGTTGATTGTCCTATGCTTGCCCAAGAGGCAACTTCTTTT
AATATCTGGCACCGAGTGGCTGTTACTGAATCGTACCCATCAAATCCGACTGGCATAATA
CTTGCGCCATTGAAAAAATTACTTGTCACTTGGCTCGCACCGGCTACAAGCTATATCTTT
AAGGTTGTCGCGTTCAAGAACTCAATTGAGTTGGGTTCATGGGAAATTAGAATGAAGACA
AGCTGGCAAAAGGATGATCCAAGGGGTTCAATGCCAGGTGGTACCGGACTAGGACAAAAT
AGTGAGAGCCCAAAGGCAAACAGTGATGGCCAGTCTGATCCTTCCTCAGAGGGTGTGGAC
TCAAACAATAATACTGCAGTTTATGCTGATCTAAACAAGTCTCCTGAAAGTGATTTTGAG
TACTGTGAAAATCCTGAGATCCTTGATTCAAATAAAGCTTCTCATCACCCCAGTGAACGT
ATTAATGACTTGCAAAATATACAGATGGCTGCAGATGGGGTAACAGAAGTCACAGAGCTG
GAAGAAGCACCTGGGCTCTCAGCCTCAGCCTTGGATGAGGAACCCAATGCTTGTGTTCAA
ACAGTGCTTCTCAGGGATTCAAACCCACTAGAACACAATCAGAGAACTGTGGTTCCTAGA
TCACATGATACATCTAATATACTGGCTGGACATGAGTTGGTGATTGTTGGACCTCGATAT
TCTGGTTCTGTGCCTCCCACTGCACCAAGAAGTGTGGAAAACAGCAAAGACAATGGTGGA
AGGGCCTCCAAACCCAAACCTTGTGACATAGTTGTTCAAAATGGCTCTTCAAAGCCTGAA
AGGGAACCAGGCAATTCGTCAAACAAAAGAGCAACGGATAAAATGGACGACTTTGGCCAC
AAGGATAGTTTCTCTGAAGTGTCCTATGAATACTGTGTAAGGGTGGTCAGGTGGCTGGAG
TGTGAGGGCTATATTGAGACAAACTTCAGGATGAAGTTTCTTACATGGTTTAGCTTACGT
GCCACCCTGCAAGAGAGAAAGATAGTTAGCGTATATGTGGATACTCTTATCGAGGACCCT
GTCAGTCTCTCTGGCCAGCTCGTCGACAGCTTCTCGGAGAGGATATATAGCAAAAAGCGG
CCTTCCATGCCTTCTGGTTTCTGCATGGATCTGTGGCATTAA

Peptide Sequence

PEP ID

Zm00001d015293_P017
PEP Infomation

pep chromosome:B73_RefGen_v4:5:82992385:82999637:-1 gene:Zm00001d015293 transcript:Zm00001d015293_T017 gene_biotype:protein_coding transcript_biotype:protein_coding description:VIN3-like protein 2
Sequence

MDPPRGGTVIDPTKCRLMSVDEKRELVRDLSKSPESAPDRLQSWTRREIVEILCSDLGRE
RKYTGLSKQRMLDYLFRVVSRKSSGPVEHVHEKEKGKDKESILEPNTTNHQSPAKRPRKS
DNPSRLPIITNNSAASDVTGPTNNLRFCQNLACRAILRDNFCRRCSCCICFSYDDNKDPS
LWLSCSSDQHLQKDTCGFSCHLECALKDERTGILQSGQGKKLDGGYYCIRCWKQNDLLGC
WKKQLVIAKDARRLDVLCHRIYLSHRILVSTEKYLVLHDIVDTALKKLEAEVGPLSGAPN
MGRGIVSRLTVGAEVQKLCAQAVDAVESLFSGVSPASSKIQRPCMMRPNFVKFEAITQTS
VMVFLDLVDCPMLAQEATSFNIWHRVAVTESYPSNPTGIILAPLKKLLVTWLAPATSYIF
KVVAFKNSIELGSWEIRMKTSWQKDDPRGSMPGGTGLGQNSESPKANSDGQSDPSSEGVD
SNNNTAVYADLNKSPESDFEYCENPEILDSNKASHHPSERINDLQNIQMAADGVTEVTEL
EEAPGLSASALDEEPNACVQTVLLRDSNPLEHNQRTVVPRSHDTSNILAGHELVIVGPRY
SGSVPPTAPRSVENSKDNGGRASKPKPCDIVVQNGSSKPEREPGNSSNKRATDKMDDFGH
KDSFSEVSYEYCVRVVRWLECEGYIETNFRMKFLTWFSLRATLQERKIVSVYVDTLIEDP
VSLSGQLVDSFSERIYSKKRPSMPSGFCMDLWH

Transcript Sequence

Transcript ID

Zm00001d015293_T017
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:82992385:82999637:-1 gene:Zm00001d015293 gene_biotype:protein_coding transcript_biotype:protein_coding description:VIN3-like protein 2
Sequence

GGAGAGGAGAGGAGAGGGAGAAGAACGAGGGAGAGGAGAGAGATCTCCCCCCACCCACCC
CGACCCTTCCTCCTCCCCTCGGCCTCTCCGGCGGGCGGGCAATTCGGCCATGGATCCCCC
ACGCGGAGGAACAGTGATTGATCCTACTAAATGTCGATTGATGAGTGTGGATGAAAAGCG
AGAACTTGTTCGTGATTTATCAAAGAGCCCAGAAAGCGCTCCTGACAGGCTCCAGTCATG
GACACGGCGGGAAATTGTAGAGATTCTTTGTTCTGATCTTGGAAGGGAGAGGAAATATAC
TGGTTTATCCAAGCAGAGAATGCTAGATTATCTCTTCAGGGTGGTGTCTCGAAAATCATC
TGGTCCAGTGGAACATGTACATGAGAAAGAGAAAGGGAAAGATAAAGAGTCAATTCTTGA
GCCCAATACAACTAACCATCAGTCCCCTGCCAAACGACCGAGAAAGAGTGACAATCCATC
ACGATTACCGATTATCACAAACAACTCAGCAGCATCTGATGTAACTGGGCCAACTAATAA
TCTACGCTTCTGCCAAAATTTAGCTTGCAGGGCTATTCTCAGGGACAATTTTTGCAGACG
CTGTTCATGCTGCATTTGTTTTAGTTACGATGATAACAAGGACCCAAGCCTCTGGTTGTC
GTGTAGTTCAGACCAACACTTACAAAAGGATACCTGTGGTTTCTCATGCCATCTTGAATG
TGCTCTAAAGGATGAAAGAACGGGTATTCTGCAGAGTGGACAAGGCAAGAAACTTGATGG
TGGCTATTATTGCATTCGCTGTTGGAAACAGAATGATTTGCTTGGGTGCTGGAAGAAACA
GCTGGTGATAGCAAAAGATGCTCGACGATTGGATGTATTGTGTCATCGGATTTATCTCAG
TCATAGGATCCTTGTCTCCACAGAGAAGTACTTGGTATTGCATGATATTGTTGATACGGC
ATTGAAGAAACTGGAGGCTGAGGTCGGTCCTTTATCTGGAGCTCCAAATATGGGTCGTGG
AATTGTCAGTCGACTTACTGTTGGTGCCGAAGTTCAGAAACTTTGTGCTCAAGCAGTAGA
TGCTGTGGAATCATTGTTCTCGGGTGTATCTCCTGCTAGTTCAAAAATTCAGCGGCCATG
CATGATGCGACCAAACTTTGTAAAGTTTGAAGCTATAACCCAAACATCCGTCATGGTATT
TTTGGATTTGGTTGATTGTCCTATGCTTGCCCAAGAGGCAACTTCTTTTAATATCTGGCA
CCGAGTGGCTGTTACTGAATCGTACCCATCAAATCCGACTGGCATAATACTTGCGCCATT
GAAAAAATTACTTGTCACTTGGCTCGCACCGGCTACAAGCTATATCTTTAAGGTTGTCGC
GTTCAAGAACTCAATTGAGTTGGGTTCATGGGAAATTAGAATGAAGACAAGCTGGCAAAA
GGATGATCCAAGGGGTTCAATGCCAGGTGGTACCGGACTAGGACAAAATAGTGAGAGCCC
AAAGGCAAACAGTGATGGCCAGTCTGATCCTTCCTCAGAGGGTGTGGACTCAAACAATAA
TACTGCAGTTTATGCTGATCTAAACAAGTCTCCTGAAAGTGATTTTGAGTACTGTGAAAA
TCCTGAGATCCTTGATTCAAATAAAGCTTCTCATCACCCCAGTGAACGTATTAATGACTT
GCAAAATATACAGATGGCTGCAGATGGGGTAACAGAAGTCACAGAGCTGGAAGAAGCACC
TGGGCTCTCAGCCTCAGCCTTGGATGAGGAACCCAATGCTTGTGTTCAAACAGTGCTTCT
CAGGGATTCAAACCCACTAGAACACAATCAGAGAACTGTGGTTCCTAGATCACATGATAC
ATCTAATATACTGGCTGGACATGAGTTGGTGATTGTTGGACCTCGATATTCTGGTTCTGT
GCCTCCCACTGCACCAAGAAGTGTGGAAAACAGCAAAGACAATGGTGGAAGGGCCTCCAA
ACCCAAACCTTGTGACATAGTTGTTCAAAATGGCTCTTCAAAGCCTGAAAGGGAACCAGG
CAATTCGTCAAACAAAAGAGCAACGGATAAAATGGACGACTTTGGCCACAAGGATAGTTT
CTCTGAAGTGTCCTATGAATACTGTGTAAGGGTGGTCAGGTGGCTGGAGTGTGAGGGCTA
TATTGAGACAAACTTCAGGATGAAGTTTCTTACATGGTTTAGCTTACGTGCCACCCTGCA
AGAGAGAAAGATAGTTAGCGTATATGTGGATACTCTTATCGAGGACCCTGTCAGTCTCTC
TGGCCAGCTCGTCGACAGCTTCTCGGAGAGGATATATAGCAAAAAGCGGCCTTCCATGCC
TTCTGGTTTCTGCATGGATCTGTGGCATTAAGGAACTGCAGGGTCTTACCGTTCGCTTTG
TAGGGAGCATATTCGGCCCATTCTTTTGTTGCAGATCGTTGCATTGATTCTTCATTGGAA
ATTTAGCTGAAGTATTTGACTTGCACATCTTCATTGAAACTTTCCTTGCTTGTCTGAAGA
AGAGGATGGTTGCCAGGCTGGATCAGGAATGCGCCTGTGGGACGAAGCAGGCTTCGTGTG
GACGCTGACGAATCCAAGCTAACCATGTCTTGTCGGTAAAATGGTTGTGCTGTATCTTCG
GGGGGATTTGCATTTTCTTGCTGACTCTTTCTGGGAATGGGAGGAATGATGTTTAAGGT