Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015289_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:5:82830866:82835208:1 gene:Zm00001d015289 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence	ATGGAGCGATATTCAGATATGAGACCAAAGGCAGAAGTTTCATATCTCGGAAGGGGTTCC AGATTCTCTTCTAGAAATCAAAGTTCAGAAGAGAGGACTAACCATAGCAGCGATAAACCG GGAAGCAGCACAAGATTCAATCCTACGAAAGCGAGAATTGGCGGTAATCAAGGGAGGCCA AGATATGTATGCGATTCATTTAAATCTCCAAGCTCAAAGGTGTCGCCTGCAGGCTCTTCC AAATTTCCACTTAGCAAGTTTGAGGAGAGGCGAAGACAGCCTTTTGTGCCAGGGTTTGAC ATTGCTGAAAGTAGTAGAAGAAAGGCTGATGCCAAGCAGCTACAGGGTAGTAAGAAAATT GCTGCAGAGAACGACAGTTCAGACAATCTGCGAGGTGAATCAGAAGGTTTTACTACTGAA CAAGTAGTAAAACCAGAAGGCTCTCATGTTGTCGGTCATTCAGGTGTTTCTGCGTATACA GTCGGGTCCCTGGTCCAAACTGCTTCACTAGGTTCTAGGACACACAGACAGAAACACAAA GAAGTGAATTTGGGTACTCCAGGAGCATCGTCTTCAACTCTGACTAACAGGTCTACTATA CCTGGAAATTCTACCATGGGTGTGAGGCCAGCTTATGGTCATGTTAATGGAGGGCAGATA CATGGTCTTAAAAACCTTGGTTGTTCTTCGGTACCTGATGCTCAGCCATCAGGTTGCCCA TCTGAGTCTGTTATTAGTAGGAGGAGGTTTGAGTTCATGAGAAAGAGGGCCTTTGACCAG GAAAGCTCTTCCAGATCAGTGAACTTAAGCTTAGGTCATTCAACTCCTACAGATATTCGC AGAATCAGAATGAATGAACAATCACTTTGTCAACAAATACCACGAAGCAGCAGCAGAAGC CATCAGGAATCGGCAGGTTCAGTTAGGACAAGACGACCTTCTCCTCATGCCACTAGGATG AGTGTTCCTGATGGAAGAGCAGATGGCGTGCTTTCTCTGCACGAGTCATCCACAAAGGAT GTACAGCCAGCTCAGGAACATCTTTCATTGGAAGAAGTCTCCACTGAGAGTTCAATAAGG CCATTCTTTGTGGAATTTGATAATAACATTTTCTCGTCTAGTCATCTTCGTCGCTCGAGT ACTCGAGCTGAAAGGGGAAGACCAAGCTCCCTTTTTGAAGAAAGTCCTCGACAAATGTTC CATAGTCTCATGGGGGAGAGGGACAGACATAGACACATAACCATGGAAGGAATTACAGAG GTTGCTTTCTAA

Peptide Sequence

PEP ID	Zm00001d015289_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:5:82830866:82835208:1 gene:Zm00001d015289 transcript:Zm00001d015289_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence	MERYSDMRPKAEVSYLGRGSRFSSRNQSSEERTNHSSDKPGSSTRFNPTKARIGGNQGRP RYVCDSFKSPSSKVSPAGSSKFPLSKFEERRRQPFVPGFDIAESSRRKADAKQLQGSKKI AAENDSSDNLRGESEGFTTEQVVKPEGSHVVGHSGVSAYTVGSLVQTASLGSRTHRQKHK EVNLGTPGASSSTLTNRSTIPGNSTMGVRPAYGHVNGGQIHGLKNLGCSSVPDAQPSGCP SESVISRRRFEFMRKRAFDQESSSRSVNLSLGHSTPTDIRRIRMNEQSLCQQIPRSSSRS HQESAGSVRTRRPSPHATRMSVPDGRADGVLSLHESSTKDVQPAQEHLSLEEVSTESSIR PFFVEFDNNIFSSSHLRRSSTRAERGRPSSLFEESPRQMFHSLMGERDRHRHITMEGITE VAF

Transcript Sequence

Transcript ID	Zm00001d015289_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:82830866:82835208:1 gene:Zm00001d015289 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence	AAAAACGCTGCTGTGTCTATCTTTCCTGCCTTCCTGGTTCCGTCCGTGCTGTGCTGACAT GCGTGTCGAATTCTCGCTCATTTGGTTACCGGTAGTGGGGTCATGTCGGATATTGATGTG GAAGGGGGAGTTGGTAGTGGCACCCCCTCCGCCTCGGACCTGGCTTCTTCTGATACCGGC TCTGGAGCTGGGTAATAGAGCGCAGACTTTGGGTCTGGAAAGCGATTGTGGTTATCGTTA CGACAAGTATGCTAGGTCAAAACTGTTTTTGTATGTAGTTGGTTCACAGATGCCAAGGGC CGATTTATTTGTTTGTTTGTTGCTCATGTTGATGTTCTGAGCATACCATTTTTCAGATGT TTATATTTCATATCTGATAAAGTTTATAAGTTTATTGTCGTCATTAAGATGGGTTAAGAA GGATGCCTGCTGTGTTTTAGGATGAGGCTCCATTTGGAAGTCAATAGTGCAACACTGCTC ATTCCAATGATATACCCCCACTACAAACAGACACTTGGTCATAATTGGCTTTCGCACATT CATATTCAATGTCTCAAACTTGTTATTACGATTCTGCGGATGGTCTGACAAAACCCTGGG CATAGTGTGATTATTGACACTAATATTAGTTCCAAAGCATTTCATTGAGTAAAAAGAAAT AATCATTCTCAATATGTCCAGGTGCATATTTCTGAATTTTCTTGCTCACTAGTTGTCTGT ATCCATCCTCTAGGTTTTATTGTTTACTGACCTTTACCAGATTGTCCCACAGACTCGCAG AACTATAGGATATCACAGAACAGTTCTTGAGGTACTTATTGCAGCCTAATAGTACATGGA GCGATATTCAGATATGAGACCAAAGGCAGAAGTTTCATATCTCGGAAGGGGTTCCAGATT CTCTTCTAGAAATCAAAGTTCAGAAGAGAGGACTAACCATAGCAGCGATAAACCGGGAAG CAGCACAAGATTCAATCCTACGAAAGCGAGAATTGGCGGTAATCAAGGGAGGCCAAGATA TGTATGCGATTCATTTAAATCTCCAAGCTCAAAGGTGTCGCCTGCAGGCTCTTCCAAATT TCCACTTAGCAAGTTTGAGGAGAGGCGAAGACAGCCTTTTGTGCCAGGGTTTGACATTGC TGAAAGTAGTAGAAGAAAGGCTGATGCCAAGCAGCTACAGGGTAGTAAGAAAATTGCTGC AGAGAACGACAGTTCAGACAATCTGCGAGGTGAATCAGAAGGTTTTACTACTGAACAAGT AGTAAAACCAGAAGGCTCTCATGTTGTCGGTCATTCAGGTGTTTCTGCGTATACAGTCGG GTCCCTGGTCCAAACTGCTTCACTAGGTTCTAGGACACACAGACAGAAACACAAAGAAGT GAATTTGGGTACTCCAGGAGCATCGTCTTCAACTCTGACTAACAGGTCTACTATACCTGG AAATTCTACCATGGGTGTGAGGCCAGCTTATGGTCATGTTAATGGAGGGCAGATACATGG TCTTAAAAACCTTGGTTGTTCTTCGGTACCTGATGCTCAGCCATCAGGTTGCCCATCTGA GTCTGTTATTAGTAGGAGGAGGTTTGAGTTCATGAGAAAGAGGGCCTTTGACCAGGAAAG CTCTTCCAGATCAGTGAACTTAAGCTTAGGTCATTCAACTCCTACAGATATTCGCAGAAT CAGAATGAATGAACAATCACTTTGTCAACAAATACCACGAAGCAGCAGCAGAAGCCATCA GGAATCGGCAGGTTCAGTTAGGACAAGACGACCTTCTCCTCATGCCACTAGGATGAGTGT TCCTGATGGAAGAGCAGATGGCGTGCTTTCTCTGCACGAGTCATCCACAAAGGATGTACA GCCAGCTCAGGAACATCTTTCATTGGAAGAAGTCTCCACTGAGAGTTCAATAAGGCCATT CTTTGTGGAATTTGATAATAACATTTTCTCGTCTAGTCATCTTCGTCGCTCGAGTACTCG AGCTGAAAGGGGAAGACCAAGCTCCCTTTTTGAAGAAAGTCCTCGACAAATGTTCCATAG TCTCATGGGGGAGAGGGACAGACATAGACACATAACCATGGAAGGAATTACAGAGGTTGC TTTCTAAAATGTTTCCTATACTGGTTCCAGTTGTTCTGTTTTCGTTGTTAGATCTTATGC CATTATAATCCAGTTAAATATATAGTGATACTGGTCTTGATTTTGATAAATATCCATAAC TTTGACTACGATGGTGGTTTAAGTGTAACATTTTGGAATGAAATAGGTTTATTTTCTGTA GGTTTTGGCTGCATTGGAGAGGATTGAACAGCAAGCAGAGCTGACCTATGATCAATTGCT AATGCTGGAGGCTAATCTATTTTTTGGCGCCTTTGCCTCCTATGATCGGCATAGAGACAT GCGGATGGATATTGATGATATGTCCTATGAGGAATTATTGGCCCTGGAGGAGAGAATAGG CTCTGTGAGCACAGCTCTTTCAGAGGAGCAGTTCACAAAATGCCTCAAAAGAAGCATATA TAGTCAGGTCGCTCTAGAAGTGAACAAATCAACCGTTGATGACATGAAATGCATCATCTG TCAGGTAAGCGGTAACCTTACCTAGCCACCTAGGGGATCTGCTATTTCTGTTATTCTGCT GGTATAAAACAAAATGCATATGAAGATTTTACATTGAGCACTTTCTTTCCAATGTAGAAC TGACCTGTTGTGTGGGACAGTCGGCGCTATGTAGTCCTGGTTTTGCCTGTCATTCTCACA GAAGACAGGCCCTTTTATGCTGCTATTACTCCACTTCCCAAACGTCTTATTAAAAAAATG TAATTGATTACTGGCAGTGTTTTTTTTTGAACGTCTAAGGGTGTGTTTGGTTTGGCTTTT GGGTTTTGGCTTTTGCCTCCTAAAAGCCAAAAGCCAACCAAAGGGTTGGATTCAGGAAGC AGATTTTTCTAAAAGCCAACTTTCTTGTAGTGCAAAACTGAAAGCACCCTTAGACCTGCT TTTAGCGGCTTTTGGATAGAACTATAAAAACATATATAGAAGAACTTTTAACGACTTTTA GTGGTTTTCACCAAACGGTTTTTAGCTTTTTAACAGTTCACAGCCTACAACAGCTTTTTC CACAGCTCACAGCCCACAGCAACTTTTTCCACAGCCACAGCCCAACCAAACGGACCCTAA GTCTCTGCTTTTCTTTGGGAAATTTGGATCCATACCATTAAAAGATCACTACTTTGGATC CATACCATTACTATCTCACTTACATGTGGGTCCACATGAGTCAATGACATGTGGGGTCCA TGGTATATATCTAAAGTTTGGATCTTTTAATGGTATAGATCCAATTGTTGCTTCTTTTAA ACGAACCATAGAGAAGCCTGTTTTCCAGAAACCGCAATCACAGAGGTTCATTTCTCCAAC ATCAGTGGTAGGCCGTAGGCGTCTGTCAGACTACGCTCCGTTTTGCACTTTACTGCTTTT CTTTCCAGCGTTGATGTTTTTAGGATTTAAATTTTTTTTCAGTCCTTTTCATGTCCATAG CCAAAGAAACTGGTGCAGAAAGGTTCTGTTATGGACTACTGAAACTTGAAACATCTCTGT CTATTCCATTCCAGGAAGAGTACGCGGAGGGCGAAGAGGTTGGGAGGCTGCCATGCGAGC ACCGGTACCATGTGTGCTGCATAGGCCAGTGGCTTGGGCAGAAGAACTGGTGTCCAGTAT GCAAAGCGTCTGCCGTGCCTTCCAAGGGCTGAAGCATTGGGGATGCTGGAAACCCCGTTC CGGATTACAAACCATCCTTGCTTTTGTCTACGTACATTGTTCTTTTCCCTATATGCATTA GATATAGATCATGTCTAGATGTATGACGCTAGAACAGCTTGCGATTTGGGAGGAAGCTAA GAGAGTAATAGTTAGCTGGTTAATAATAGTTCATAGCTAATATTTGCTAGATAACTATTA CTTGGCTACCTATTAGCTGTGCCTTTCACATTGTGGTACAGGACAAATGCTTGTCAGATC GTGAACAACCTTATAACTTGATGAATGGCCTAAGTCAAAGAG