Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d015279_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:5:82560360:82562575:1 gene:Zm00001d015279 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 59
Sequence

ATGGAGGACTTCTATGAGGCAAGAATAGACGACGTTGATGGAGAGAAAATTGGAATGTTC
GGTGTATATGATGGTCATGGAGGAGTCCGAGCAGCTGAGTATGTTAAGCAGCACCTTTTC
AGCAATTTAATCAAACACCCAAAGTTCATCACTGATACCAAGGCTGCTATCGCCGAAACT
TACAACCTCACAGATTCAGAATTTCTGAAAGCTGATAGCTGTCAAACTCGAGATGCTGGC
TCAACTGCCTCAACAGCTATTATTGTAGGTGACCGTTTGCTTGTTGCAAATGTTGGAGAT
TCTAGAGCCGTTATTTCTAAAGGAGGACAAGCGATTGCGGTTTCAAGGGATCACAAACCT
GATCAGACAGATGAGAGACAAAGAATTGAGGACGCAGGGGGCTTTGTTATGTGGGCTGGG
ACATGGCGAGTGGGTGGTGTTCTTGCTGTCTCTCGCGCATTTGGTGATAAACTCTTGAAG
CAGTATGTTGTCGCTGACCCTGAAATCAAGGAGGAGGTGGTCGACAGCTCCCTTGAATTC
CTCATCCTTGCTAGTGATGGACTCTGGGATGTTGTCACTAATGAGGAAGCTGTTGCCATG
GTCAAGCCTATTCAGGACCCCCAGGAAGCAGCAAACAAGCTTCTCGAAGAAGCGTCCCGA
AGGGGAAGCTCTGATAACATCACCGTTGTCATCGTCCGCTTCCTATATGGAACTACCGGT
GATAAATCAGGCGCAGACAAAGAGACCACCAATGACCAAAACTCCTAA

Peptide Sequence

PEP ID

Zm00001d015279_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:5:82560360:82562575:1 gene:Zm00001d015279 transcript:Zm00001d015279_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 59
Sequence

MEDFYEARIDDVDGEKIGMFGVYDGHGGVRAAEYVKQHLFSNLIKHPKFITDTKAAIAET
YNLTDSEFLKADSCQTRDAGSTASTAIIVGDRLLVANVGDSRAVISKGGQAIAVSRDHKP
DQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEEVVDSSLEF
LILASDGLWDVVTNEEAVAMVKPIQDPQEAANKLLEEASRRGSSDNITVVIVRFLYGTTG
DKSGADKETTNDQNS

Transcript Sequence

Transcript ID

Zm00001d015279_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:82560360:82562575:1 gene:Zm00001d015279 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 59
Sequence

AGCTTGTGTTTGTTTTCTAGTCTAACATAACTTGTGTGTTATACTCATGTGTTAGATGGT
ATTCCAAGCTAACTACAAAGAAATAAAGACTAAAGAGTGTCTGTTACTCTGGTGAACTTT
ATGGAAGTTAGATGTTGAATTTTCTTTTTCGTCCGAAATATAAAGCATACAAAACTCCAT
AGCAGCTCAATCAGTTTATTAATGTCATAGTAATAATGAAAATGGGCGGTTCATTTATGG
AGTTGCGAGTTCTCCTGGTAAAAGAGCATCGATGGAGGACTTCTATGAGGCAAGAATAGA
CGACGTTGATGGAGAGAAAATTGGAATGTTCGGTGTATATGATGGTCATGGAGGAGTCCG
AGCAGCTGAGTATGTTAAGCAGCACCTTTTCAGCAATTTAATCAAACACCCAAAGTTCAT
CACTGATACCAAGGCTGCTATCGCCGAAACTTACAACCTCACAGATTCAGAATTTCTGAA
AGCTGATAGCTGTCAAACTCGAGATGCTGGCTCAACTGCCTCAACAGCTATTATTGTAGG
TGACCGTTTGCTTGTTGCAAATGTTGGAGATTCTAGAGCCGTTATTTCTAAAGGAGGACA
AGCGATTGCGGTTTCAAGGGATCACAAACCTGATCAGACAGATGAGAGACAAAGAATTGA
GGACGCAGGGGGCTTTGTTATGTGGGCTGGGACATGGCGAGTGGGTGGTGTTCTTGCTGT
CTCTCGCGCATTTGGTGATAAACTCTTGAAGCAGTATGTTGTCGCTGACCCTGAAATCAA
GGAGGAGGTGGTCGACAGCTCCCTTGAATTCCTCATCCTTGCTAGTGATGGACTCTGGGA
TGTTGTCACTAATGAGGAAGCTGTTGCCATGGTCAAGCCTATTCAGGACCCCCAGGAAGC
AGCAAACAAGCTTCTCGAAGAAGCGTCCCGAAGGGGAAGCTCTGATAACATCACCGTTGT
CATCGTCCGCTTCCTATATGGAACTACCGGTGATAAATCAGGCGCAGACAAAGAGACCAC
CAATGACCAAAACTCCTAATTACCTCCTGTAGGGATCCCTCATGCGTGTGTTTTCTTCTG
GCTGTTGTATCTGATGCTCAAAGTAGATGCTCCGTGTGTCTTCCGCTGCTGTTCCGCAAG
GAAACTGACTCCCCCGACCGTCGTCGTGATGCTGCCCGCTCATGCTCCTAGACGGGAATG
ACTGCCGCAGAATGACGAATAGGGCTGGTGTGTGTTACAGTATGGTCCTTTACCCCTCCT
TTCCATTAAGCTCTGTGATGTAGCTGTCCGTGCTGTTGATTCATGAGATCATGC