Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015279_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:5:82559498:82562697:1 gene:Zm00001d015279 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 59
Sequence	ATGGGGCTCGCCGGGGACGGGTCGGCGGACACCGCCCACCTCAGTAATAATGAAAATGGG CGGTTCATTTATGGAGTTGCGAGTTCTCCTGGTAAAAGAGCATCGATGGAGGACTTCTAT GAGGCAAGAATAGACGACGTTGATGGAGAGAAAATTGGAATGTTCGGTGTATATGATGGT CATGGAGGAGTCCGAGCAGCTGAGTATGTTAAGCAGCACCTTTTCAGCAATTTAATCAAA CACCCAAAGTTCATCACTGATACCAAGGCTGCTATCGCCGAAACTTACAACCTCACAGAT TCAGAATTTCTGAAAGCTGATAGCTGTCAAACTCGAGATGCTGGCTCAACTGCCTCAACA GCTATTATTGTAGGTGACCGTTTGCTTGTTGCAAATGTTGGAGATTCTAGAGCCGTTATT TCTAAAGGAGGACAAGCGATTGCGGTTTCAAGGGATCACAAACCTGATCAGACAGATGAG AGACAAAGAATTGAGGACGCAGGGGGCTTTGTTATGTGGGCTGGGACATGGCGAGTGGGT GGTGTTCTTGCTGTCTCTCGCGCATTTGGTGATAAACTCTTGAAGCAGTATGTTGTCGCT GACCCTGAAATCAAGGAGGAGGTGGTCGACAGCTCCCTTGAATTCCTCATCCTTGCTAGT GATGGACTCTGGGATGTTGTCACTAATGAGGAAGCTGTTGCCATGGTCAAGCCTATTCAG GACCCCCAGGAAGCAGCAAACAAGCTTCTCGAAGAAGCGTCCCGAAGGGGAAGCTCTGAT AACATCACCGTTGTCATCGTCCGCTTCCTATATGGAACTACCGGTGATAAATCAGGCGCA GACAAAGAGACCACCAATGACCAAAACTCCTAA

Peptide Sequence

PEP ID	Zm00001d015279_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:5:82559498:82562697:1 gene:Zm00001d015279 transcript:Zm00001d015279_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 59
Sequence	MGLAGDGSADTAHLSNNENGRFIYGVASSPGKRASMEDFYEARIDDVDGEKIGMFGVYDG HGGVRAAEYVKQHLFSNLIKHPKFITDTKAAIAETYNLTDSEFLKADSCQTRDAGSTAST AIIVGDRLLVANVGDSRAVISKGGQAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVG GVLAVSRAFGDKLLKQYVVADPEIKEEVVDSSLEFLILASDGLWDVVTNEEAVAMVKPIQ DPQEAANKLLEEASRRGSSDNITVVIVRFLYGTTGDKSGADKETTNDQNS

Transcript Sequence

Transcript ID	Zm00001d015279_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:82559498:82562697:1 gene:Zm00001d015279 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 59
Sequence	ATCCGTGCGCCTCTCGCTCTCGCTGGTGGTGCTCCTCCTCCTCCTCCTGCTCCCGGGGCG GGCGGCCTCCTTTTCCACCTCCTGCTGGTGCCAGGGCCGGGAGGGCGTCGCGGAGGTGGC GCGCATGGGGCTCGCCGGGGACGGGTCGGCGGACACCGCCCACCTCAGTAATAATGAAAA TGGGCGGTTCATTTATGGAGTTGCGAGTTCTCCTGGTAAAAGAGCATCGATGGAGGACTT CTATGAGGCAAGAATAGACGACGTTGATGGAGAGAAAATTGGAATGTTCGGTGTATATGA TGGTCATGGAGGAGTCCGAGCAGCTGAGTATGTTAAGCAGCACCTTTTCAGCAATTTAAT CAAACACCCAAAGTTCATCACTGATACCAAGGCTGCTATCGCCGAAACTTACAACCTCAC AGATTCAGAATTTCTGAAAGCTGATAGCTGTCAAACTCGAGATGCTGGCTCAACTGCCTC AACAGCTATTATTGTAGGTGACCGTTTGCTTGTTGCAAATGTTGGAGATTCTAGAGCCGT TATTTCTAAAGGAGGACAAGCGATTGCGGTTTCAAGGGATCACAAACCTGATCAGACAGA TGAGAGACAAAGAATTGAGGACGCAGGGGGCTTTGTTATGTGGGCTGGGACATGGCGAGT GGGTGGTGTTCTTGCTGTCTCTCGCGCATTTGGTGATAAACTCTTGAAGCAGTATGTTGT CGCTGACCCTGAAATCAAGGAGGAGGTGGTCGACAGCTCCCTTGAATTCCTCATCCTTGC TAGTGATGGACTCTGGGATGTTGTCACTAATGAGGAAGCTGTTGCCATGGTCAAGCCTAT TCAGGACCCCCAGGAAGCAGCAAACAAGCTTCTCGAAGAAGCGTCCCGAAGGGGAAGCTC TGATAACATCACCGTTGTCATCGTCCGCTTCCTATATGGAACTACCGGTGATAAATCAGG CGCAGACAAAGAGACCACCAATGACCAAAACTCCTAATTACCTCCTGTAGGGATCCCTCA TGCGTGTGTTTTCTTCTGGCTGTTGTATCTGATGCTCAAAGTAGATGCTCCGTGTGTCTT CCGCTGCTGTTCCGCAAGGAAACTGACTCCCCCGACCGTCGTCGTGATGCTGCCCGCTCA TGCTCCTAGACGGGAATGACTGCCGCAGAATGACGAATAGGGCTGGTGTGTGTTACAGTA TGGTCCTTTACCCCTCCTTTCCATTAAGCTCTGTGATGTAGCTGTCCGTGCTGTTGATTC ATGAGATCATGCTAGAGATTTTTCCTGGCAGTGCGTGTAAAACTGTCGAACTATTTGAAC GAAAGTTGTACACTGCAGTATGTAACAATCTCCTAGATCCGCCTTTTGTGGCGTCCTGCT GTCATGCACCTGAA