Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015209_T050
CDS Infomation	cds chromosome:B73_RefGen_v4:5:79502749:79510574:1 gene:Zm00001d015209 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone acetyltransferase HAC1
Sequence	ATGCTAAGGAACAATTCCTTTAAACAGTCTCAAATGGCTTCCACCCATTCAATGCAACTG GCAGAACAGGGGTCACTGCTACACACTGAACTGGTATCTTCACAAACTAGTGATCCTGCT GATCTTCCAAGCTTCCAGGGTCAATACCAGCAAAGAAATGCTCTTGACAATGTTAAAGGA GGGCAGATGCTTGGTCATCTATCTAGCTCTCAAAATTTTCATCCTTCTGTCTCACATGGT TCTCAGCAATTGTTGCCCTCTAACCAGCAGCTTGATGACGGTTCTAATGCTGTAAGCTAT GTGCTGAAAGGATCGCAGGCAGAGCAAATGCTGCGTCCTCAATGGCAGCCACAAACAATG GAAAAGGCTCCTGTTACTACTAATTCAACACTCGAAAAGCAAATACAAGAAGATTTTTGT CAAAGAGCAATGTCGCAAGATGGAGCACAGCAACCATTTTCATCAGATTGGCGTCTTTCT AATTGCACTGCAGCTTCTATTGATCCTGCATTGCCGAAGCCTGCAGCTGGAGGGTTTGAA CAGGTCAATGGAAATATACATTACCTCCGTCAGATAAAGTGGTTGCTGCTACTGTTTCAT GCAAAAACATGCACATACCCTGTTGGAAGTTGTAAGTTCCATGGTTGTGTTCAGGTGCAG GAGCTTTTGAAGCATTTTCAGAACTGCCAAAGTAAAGATTGTTCATACAGGAGCTGCAGT AAGTCAAAAATGATGTCTCACCATTATAAAACTTGTGTCGATGAACAATGTCCTGTGTGC AGCGTTGTAAGGAAGTTTTTGCGCCAATCAACTGAACAGGCATCTAAGCAAAAAGCTCTC GAGTCTAGAAAACTTGCTCAACAAAATGTGCCTCAGAGAATCATGAACGGGATAGAAGGT GATAGAATGGATGTTGACCCAATGTCAGTTGAAGCATTTGATGATCAACCATTCGTTCCA AAACGCTTGAAGACGCATCCTCCATCACCCAGTGGCCTAGAGAATGATATCTCTGTAGTC TCCAATTATCATGTAAACTCAGGCTTTGCATTGCAGGAAACACAGCCTGAGCAGCTTGAC CACAATAACAGGACATCATATCTGAAACGAGAGGTAGATGCAAAGGCTGACATGCGAGCT CCTCAAAAGCCCATAAAAATTAGTTATGGTATTGATGGAAATGTGACTGCATCAAGGCAT AATGTGATTCCTGGTGTTCCCAGTGAGATTAATTCTCATATCAAGCAAGAAAACTTGTTG GTTGACAAAGAGACAAGTGAAACCGCCCTTGAGGTTAAGAATGAAACAAATGATCCAACT GATGCGACTGTGTCTAAATCAGGAAAACCAAAAATAAAAGGTGTTTCAATGACGGAATTA TTCACTCCAGAACAAATAATGGAACATATTGACAGTCTAAGGCTGTGGGTTGGTCAGAGC AAGGCTAAAGCTGAAAAGAATCAAGCTATTGGTCATTCTGAGAACGAGAACTCTTGCCAG CTCTGTAGAGTAGAGAAACTTACTTTTGAACCTCCACCAATATATTGTTCTCCTTGTGGA GCTCGGATAAAGCGAAACGCGCCATACTACACTGTGGGTACTGGTGATACACGTCATTAT TTCTGTATCCCTTGTTACAATGAGTCTCGTGGTGAGACTATTGAGGTTGAAGGTCAAACA TTTCCGAAGGCAAGGTTAGAGAAAAAAAGAAATGATGAGGAAACGGAAGAATGGTGGGTT CAATGTGACAAATGTGAATGTTGGCAACATCAAATTTGTGCTTTATTTAATGGAAGAAGG AACGATGGAGGACAAGCTGAATATACTTGCCCCAATTGCTATGTTGAGGAGGTCAAATGT GGGCTACGCAAACCTTTACCACAGAGTGCTGTTCTTGGGGCAAAAGATTTGCCGAGAACT GTTCTTAGTGATCATATAGAAGATCGGCTATTTAAACGACTTAAGCAGGAGAAACAGGAC CGTGCAGCTGCTGCTGGCAAAAATATTGATGAGATTCCTGGAGCGGAAGGACTTGTTGTC AGAGTTGTTTCATCAGTGGATAAGAAGCTGGAGGTTAAACCACGTTTTTTAGAAATTTTT CAAGAAGACAACTACCCTACAGAGTTCCCTTACAAGTCCAAGGCTGTTCTCTTGTTCCAG AAAATAGAAGGTGTGGAAGTATGTCTATTTGGAATGTATGTTCAAGAATTTGGTGCTGAA TGCTCTTTCCCGAACCAGCGTCGTGTTTATTTGTCATACTTGGATTCTGTTAAGTACTTC AGACCTGAGATTAAAACAGTATCTGGAGAAGCCTTGCGTACATTTGTGTATCATGAAATT CTGATAGGATATCTTGAATACTGTAAACTGCGGGGATTCACAAGTTGTTACATATGGGCT TGTCCACCTTTGAAGGGTGAAGATTACATCTTATATTGCCATCCTGAGATTCAAAAGACT CCGAAATCTGATAAACTGCGTGAGTGGTATCTATCTATGCTTCGGAAAGCTTCTAAGGAG GAAATTGTTGTTGAGCTCACAAATCTATATGACCATTTCTTCCTTACTATGGGGGAATGC AAGGCTAAGGTGACTGCTTCTCGCTTGCCATATTTCGATGGAGATTATTGGCCAGGAGCT GCAGAAGATATGATCAATCAACTCCGACAAGAAGAAGACGACCGCAAACTCCAGAAAAAG AGTAAAACAAAGAAGATTATTACAAAAAGAGCTCTTAAAGCTGCTGGCCACACCGATCTC AGCGGGAATGCTTCCAAGGATGCTATGTTGATGCAAAAGCTTGGTGAAACCATATATCCT ATGAAGGAAGATTTCATTATGGTCCATTTACAGTATTCGTGTAGTCACTGTTGTACCCTT ATGGTGTCTGGAAGACGTTGGGTTTGTCATCAATGCAGAAGCTTTTACATCTGCGACAAG TATGTTGATTTCTTTGACAAAATTGGACCATGCTGCACTGCATGA

Peptide Sequence

PEP ID	Zm00001d015209_P050
PEP Infomation	pep chromosome:B73_RefGen_v4:5:79502749:79510574:1 gene:Zm00001d015209 transcript:Zm00001d015209_T050 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone acetyltransferase HAC1
Sequence	MLRNNSFKQSQMASTHSMQLAEQGSLLHTELVSSQTSDPADLPSFQGQYQQRNALDNVKG GQMLGHLSSSQNFHPSVSHGSQQLLPSNQQLDDGSNAVSYVLKGSQAEQMLRPQWQPQTM EKAPVTTNSTLEKQIQEDFCQRAMSQDGAQQPFSSDWRLSNCTAASIDPALPKPAAGGFE QVNGNIHYLRQIKWLLLLFHAKTCTYPVGSCKFHGCVQVQELLKHFQNCQSKDCSYRSCS KSKMMSHHYKTCVDEQCPVCSVVRKFLRQSTEQASKQKALESRKLAQQNVPQRIMNGIEG DRMDVDPMSVEAFDDQPFVPKRLKTHPPSPSGLENDISVVSNYHVNSGFALQETQPEQLD HNNRTSYLKREVDAKADMRAPQKPIKISYGIDGNVTASRHNVIPGVPSEINSHIKQENLL VDKETSETALEVKNETNDPTDATVSKSGKPKIKGVSMTELFTPEQIMEHIDSLRLWVGQS KAKAEKNQAIGHSENENSCQLCRVEKLTFEPPPIYCSPCGARIKRNAPYYTVGTGDTRHY FCIPCYNESRGETIEVEGQTFPKARLEKKRNDEETEEWWVQCDKCECWQHQICALFNGRR NDGGQAEYTCPNCYVEEVKCGLRKPLPQSAVLGAKDLPRTVLSDHIEDRLFKRLKQEKQD RAAAAGKNIDEIPGAEGLVVRVVSSVDKKLEVKPRFLEIFQEDNYPTEFPYKSKAVLLFQ KIEGVEVCLFGMYVQEFGAECSFPNQRRVYLSYLDSVKYFRPEIKTVSGEALRTFVYHEI LIGYLEYCKLRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKASKE EIVVELTNLYDHFFLTMGECKAKVTASRLPYFDGDYWPGAAEDMINQLRQEEDDRKLQKK SKTKKIITKRALKAAGHTDLSGNASKDAMLMQKLGETIYPMKEDFIMVHLQYSCSHCCTL MVSGRRWVCHQCRSFYICDKYVDFFDKIGPCCTA

Transcript Sequence

Transcript ID	Zm00001d015209_T050
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:79502749:79510574:1 gene:Zm00001d015209 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone acetyltransferase HAC1
Sequence	CAGTATCATATAAATCAACAGCAGCCAAATTCACAGCATCAGCAGGCTATGCTAAGGAAC AATTCCTTTAAACAGTCTCAAATGGCTTCCACCCATTCAATGCAACTGGCAGAACAGGGG TCACTGCTACACACTGAACTGGTATCTTCACAAACTAGTGATCCTGCTGATCTTCCAAGC TTCCAGGGTCAATACCAGCAAAGAAATGCTCTTGACAATGTTAAAGGAGGGCAGATGCTT GGTCATCTATCTAGCTCTCAAAATTTTCATCCTTCTGTCTCACATGGTTCTCAGCAATTG TTGCCCTCTAACCAGCAGCTTGATGACGGTTCTAATGCTGTAAGCTATGTGCTGAAAGGA TCGCAGGCAGAGCAAATGCTGCGTCCTCAATGGCAGCCACAAACAATGGAAAAGGCTCCT GTTACTACTAATTCAACACTCGAAAAGCAAATACAAGAAGATTTTTGTCAAAGAGCAATG TCGCAAGATGGAGCACAGCAACCATTTTCATCAGATTGGCGTCTTTCTAATTGCACTGCA GCTTCTATTGATCCTGCATTGCCGAAGCCTGCAGCTGGAGGGTTTGAACAGGTCAATGGA AATATACATTACCTCCGTCAGATAAAGTGGTTGCTGCTACTGTTTCATGCAAAAACATGC ACATACCCTGTTGGAAGTTGTAAGTTCCATGGTTGTGTTCAGGTGCAGGAGCTTTTGAAG CATTTTCAGAACTGCCAAAGTAAAGATTGTTCATACAGGAGCTGCAGTAAGTCAAAAATG ATGTCTCACCATTATAAAACTTGTGTCGATGAACAATGTCCTGTGTGCAGCGTTGTAAGG AAGTTTTTGCGCCAATCAACTGAACAGGCATCTAAGCAAAAAGCTCTCGAGTCTAGAAAA CTTGCTCAACAAAATGTGCCTCAGAGAATCATGAACGGGATAGAAGGTGATAGAATGGAT GTTGACCCAATGTCAGTTGAAGCATTTGATGATCAACCATTCGTTCCAAAACGCTTGAAG ACGCATCCTCCATCACCCAGTGGCCTAGAGAATGATATCTCTGTAGTCTCCAATTATCAT GTAAACTCAGGCTTTGCATTGCAGGAAACACAGCCTGAGCAGCTTGACCACAATAACAGG ACATCATATCTGAAACGAGAGGTAGATGCAAAGGCTGACATGCGAGCTCCTCAAAAGCCC ATAAAAATTAGTTATGGTATTGATGGAAATGTGACTGCATCAAGGCATAATGTGATTCCT GGTGTTCCCAGTGAGATTAATTCTCATATCAAGCAAGAAAACTTGTTGGTTGACAAAGAG ACAAGTGAAACCGCCCTTGAGGTTAAGAATGAAACAAATGATCCAACTGATGCGACTGTG TCTAAATCAGGAAAACCAAAAATAAAAGGTGTTTCAATGACGGAATTATTCACTCCAGAA CAAATAATGGAACATATTGACAGTCTAAGGCTGTGGGTTGGTCAGAGCAAGGCTAAAGCT GAAAAGAATCAAGCTATTGGTCATTCTGAGAACGAGAACTCTTGCCAGCTCTGTAGAGTA GAGAAACTTACTTTTGAACCTCCACCAATATATTGTTCTCCTTGTGGAGCTCGGATAAAG CGAAACGCGCCATACTACACTGTGGGTACTGGTGATACACGTCATTATTTCTGTATCCCT TGTTACAATGAGTCTCGTGGTGAGACTATTGAGGTTGAAGGTCAAACATTTCCGAAGGCA AGGTTAGAGAAAAAAAGAAATGATGAGGAAACGGAAGAATGGTGGGTTCAATGTGACAAA TGTGAATGTTGGCAACATCAAATTTGTGCTTTATTTAATGGAAGAAGGAACGATGGAGGA CAAGCTGAATATACTTGCCCCAATTGCTATGTTGAGGAGGTCAAATGTGGGCTACGCAAA CCTTTACCACAGAGTGCTGTTCTTGGGGCAAAAGATTTGCCGAGAACTGTTCTTAGTGAT CATATAGAAGATCGGCTATTTAAACGACTTAAGCAGGAGAAACAGGACCGTGCAGCTGCT GCTGGCAAAAATATTGATGAGATTCCTGGAGCGGAAGGACTTGTTGTCAGAGTTGTTTCA TCAGTGGATAAGAAGCTGGAGGTTAAACCACGTTTTTTAGAAATTTTTCAAGAAGACAAC TACCCTACAGAGTTCCCTTACAAGTCCAAGGCTGTTCTCTTGTTCCAGAAAATAGAAGGT GTGGAAGTATGTCTATTTGGAATGTATGTTCAAGAATTTGGTGCTGAATGCTCTTTCCCG AACCAGCGTCGTGTTTATTTGTCATACTTGGATTCTGTTAAGTACTTCAGACCTGAGATT AAAACAGTATCTGGAGAAGCCTTGCGTACATTTGTGTATCATGAAATTCTGATAGGATAT CTTGAATACTGTAAACTGCGGGGATTCACAAGTTGTTACATATGGGCTTGTCCACCTTTG AAGGGTGAAGATTACATCTTATATTGCCATCCTGAGATTCAAAAGACTCCGAAATCTGAT AAACTGCGTGAGTGGTATCTATCTATGCTTCGGAAAGCTTCTAAGGAGGAAATTGTTGTT GAGCTCACAAATCTATATGACCATTTCTTCCTTACTATGGGGGAATGCAAGGCTAAGGTG ACTGCTTCTCGCTTGCCATATTTCGATGGAGATTATTGGCCAGGAGCTGCAGAAGATATG ATCAATCAACTCCGACAAGAAGAAGACGACCGCAAACTCCAGAAAAAGAGTAAAACAAAG AAGATTATTACAAAAAGAGCTCTTAAAGCTGCTGGCCACACCGATCTCAGCGGGAATGCT TCCAAGGATGCTATGTTGATGCAAAAGCTTGGTGAAACCATATATCCTATGAAGGAAGAT TTCATTATGGTCCATTTACAGTATTCGTGTAGTCACTGTTGTACCCTTATGGTGTCTGGA AGACGTTGGGTTTGTCATCAATGCAGAAGCTTTTACATCTGCGACAAGTATGTTGATTTC TTTGACAAAATTGGACCATGCTGCACTGCATGATTTATGATTTATCCATCCTGCTATATG ATTTCCAACCAGTTTATAGTTATCTTCTTTTGACACATATGATCACTACATATGTGAGTT GGTTCCAATAATTTAACCATGATTCTGTGGAACATTTTGTTTTCATCTGGACACTTCTGT CCTGCTCATATTTTTTTATTTGCTTGTAAATTTACTATTGTTGCTCAAATAATCTTTATT TCATCAAAACGTTTTTCCTTGATCAGTTATGGTGATTAGAACAATTTCTTTTTTTTGTTA TAAATTTTTTCTTTCTGAGAACATTTTTCTTTGCTTGGAGCATTGTCCCTAGTGTTTAGA ACAATTACTTTTTTTTATCAAAACAGTTTTTCCCCCTTTGCTCAGATCAATTTCTTGGTG CTTAGAACAATTTCTGCTTCGGTTATACAATTTTTTGTTTGAGGTGTAAAAAGTTTCTTG TTCACATGTACAAACTTCAATCCAATATATTACTTGTTCTGCTAGCAAAATGTTCTTGTT TCAGGTGTATAATTTGTTGTGCATCTGTAATTTTTTTTAGTTTCACGAGTTTATATATTT TCCCAGGTGTACAAACATTTTATTTCAGCTGCAGAGTTTTTTGTTCCACAAACGCGTATT ATTTGTTTGAAATTCAAAGTGTACAAACTTTGTTTCAGATATCAACTATTCTTCACAATG TCGGAATGACTGACCTTTCACAAACAGCTTGACATTGAACCATGTGTTTTTTAAAATTAT ATATTTTATAGAGTTTTTAGTGTTCATTATTTTGTTACTTTTTGTAGACACGAAGTCTTA GCAAATAGAGTGAATGACAAGACACCCAAAGTTAAAGTCTTCCAAAAATTGGGCCGCAAC TGTATTTAGGGCTGGATAACGAGCCAACTTGGCTCGGTTCATTTAGCTCACGAGCCAGGC AATAAAAATCACAGAACATGTAAAATGTACGTTTACCAACTTAGGAATAATAACAATGCA AAAACAACTTATCCATAAGCCTTAAATCAAACAAATAGACTAAAACATACCGGCATACAT AAATACAACAATGCACTAAAGCACCACACCATACAATCATGGTTCATGCTCCATACCATA CATGATGCATCCATTAATGATTATCCATATATCCTTTTAAAACAAAGTGATAGCATCATA GACCATAGTAAGTGCATACCTCCAAGGTCCAGTCTTGTCTTGTATACAGTTTTTCAAGAT GGATAAACTATATAATTCTTGTTTGATATCTTTTGGTGAAATTGAGTATTTTGTTGGTCC AGGTGTTATGATGCAGAACAGCAACTTGACGACAGGGAGAGGCACCCGAGTAATAATAGA GACACACATATGCTCCATCCGGTTGATATTCTTGGGGTGCCCAAAGATACCAAAGATAGA GATGACATCTTGGAAAGTGAGTTCTTTGACACCAGACAGGCATTCCTTAGTCTTTGCCAA GGAAATCATTATCAGTATGACACACTTCGACGCGCAAAGCATTCATCAATGATGGTGTTG TACCACCTACACAATCCAACTGCACCAGCATTTGTCACTACGTGCAATGTCTGCAGTCAT GATATTGAAACTGGTCAAGGCTGGCGGTGCGAGATTTGTCCAGATTTTGATGTGTGCAAC TCTTGTTTCCAAAAAGGAGTGGTTACTCATCCTCACAAGTTAACGAACCATCCATCAGCT GCTGACCGTGATGCTCAAAACGCAGAAGCTCGGCAAATGCGTGTCCAGCAGCTAAGAAAG ATGCTTGATCTTCTGGTACATGCGTCGACATGCCGCTCTGGTAGTTGCCAGTATCCCAAC TGCCGAAAAGTCAAGGGGCTATTCCGTCATGGGATGCAGTGCAAAACGCGTGCTTCAGGA GGGTGTGTCCTTTGCAAGAAAATGTGGTACATGCTTCAACTCCATGCCCGAGCTTGCAAG GATTCAGACTGCAATGTGCCGCGGTGCAGG