Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015205_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:79250420:79253647:1 gene:Zm00001d015205 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pheophytinase chloroplastic
Sequence	ATGGAGGTGGTCTCTTGCAGCCACTCCTGCTCGGCATTACATCAAACACCAGCAAGCACA TGGAGGCTTCGGGGCAGTGCTCTTGGCCTTGGTCTTGGGCATGCCAGGCCTTCCCGGACC AGAAGATACACAGTTGCGTGTGTAGGAACCACGAGTGGAGCTTCGAATCCGGGTGGTTCC GGCAAGGTCCATGCAGCCCAGGGATTCCATGTAAGCGACGTGGATGCAGCCCTGCAGGGC ATTCCTTCCATGAAAGCCGGGGAGGCCGAGAGGGTGATGATTCAAGGCCTTCCGGAAGGC CCTGACAGCTCCCCGATCAGTACTGGGTTCTGGGAGTGGAAGCCGAAGCTGACTGTGTAC TACGAGAGGTCCGGCATGAAGAACAGCAAGGCACCTGCGGTGCTCTTCCTGCCGGGGTTC GGAGTCGGGACGTTCCATTTCGAGAAGCAGCTGAGGGATCTTGGTCGCGATCATCGGGTG TGGACGATGGATTTTCTCGGGCAGGGGATGTCGCTGCCTGGTGAAGATCCTGCTCCTAGT AGCATAGCGAGCGAAGATGCGTTTTGGGGCTTTGGACAAGATTCGCAGCCTTGGGCAGAG GAGCTGGTGTATTCTGTGGATTTATGGCAAAACCAAGTTCAGCATTTCATTGAGGAGGTT ATCCGTGAACCAGTTTATATTGTGGGGAACTCTCTTGGAGGTTTTGTTGCTCTGTATTTT GCTGCATCCAGTCCACACCTTGTAAAAGGTGTCACACTGCTTAATGCAACACCGTTTTGG GGATTCTTTCCCAACCCTGCTACATCTCCCCGATTGTCAAAGATTTTCCCATGGGCTGGG ACATTTCCGCTTCCATCATTTGTGAGGAAAATTACTGAAGCAGTTTGGCAAAAGATAAGT GACCCAAAAAGTATTCAGGACATACTCAAACAAGTATACGCTGACCATTCAACAAATGTG GACAAAGTATTCTCTCGTATTGTGGAGATAACACAACACCCAGCAGCTGCTGCATCGTTT GCCTCCATTATGTTTGCTCCAAGGGGTCAGATATCCTTCCAAGAGGCCATCTCTAGGTGC CAAGACCAAGGCATTCCTATATCTCTCATGTATGGAAGAGAAGATCCTTGGATTAGACCT ATTTGGGGCCTTAAAGTTAAACAGCAAGTGCCCGAAGCACCTTATTATGAAATTAGCCCC GCTGGTCATTGTCCTCATGATGAGGTCCCTGAGGTAAGGATTGTTCTTTGCTTATAA

Peptide Sequence

PEP ID	Zm00001d015205_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:79250420:79253647:1 gene:Zm00001d015205 transcript:Zm00001d015205_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pheophytinase chloroplastic
Sequence	MEVVSCSHSCSALHQTPASTWRLRGSALGLGLGHARPSRTRRYTVACVGTTSGASNPGGS GKVHAAQGFHVSDVDAALQGIPSMKAGEAERVMIQGLPEGPDSSPISTGFWEWKPKLTVY YERSGMKNSKAPAVLFLPGFGVGTFHFEKQLRDLGRDHRVWTMDFLGQGMSLPGEDPAPS SIASEDAFWGFGQDSQPWAEELVYSVDLWQNQVQHFIEEVIREPVYIVGNSLGGFVALYF AASSPHLVKGVTLLNATPFWGFFPNPATSPRLSKIFPWAGTFPLPSFVRKITEAVWQKIS DPKSIQDILKQVYADHSTNVDKVFSRIVEITQHPAAAASFASIMFAPRGQISFQEAISRC QDQGIPISLMYGREDPWIRPIWGLKVKQQVPEAPYYEISPAGHCPHDEVPEVRIVLCL

Transcript Sequence

Transcript ID	Zm00001d015205_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:79250420:79253647:1 gene:Zm00001d015205 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pheophytinase chloroplastic
Sequence	GAGTTACTTCTACGCATCTCCAAGCCGCAAACGGACAAAACCAAAGCAATCCGTGCACAC CGAACTCCTCTCCTCCACTCGCCTCTTCCACGCCACGCGGATGGCGTGCGCGCACGCAAG GTCCAAAGAAGCAGGCCATCCGGGACGGCGCGAGCGCGTCCTGCGTTCCATTCCACCCTC CTCCGTCTCCGATCCTCGCCTTCAACTCCACTCCCTCGCTCTCTCGGGCCTTCTTCCCTA GCGGCGACGACGGGGTGATCACTGATTCACTGCCGCCCGCGCCAGGTCGGCCAGAACTAG TGGGCGCCAAACATCATAGCGATCATGGAGGTGGTCTCTTGCAGCCACTCCTGCTCGGCA TTACATCAAACACCAGCAAGCACATGGAGGCTTCGGGGCAGTGCTCTTGGCCTTGGTCTT GGGCATGCCAGGCCTTCCCGGACCAGAAGATACACAGTTGCGTGTGTAGGAACCACGAGT GGAGCTTCGAATCCGGGTGGTTCCGGCAAGGTCCATGCAGCCCAGGGATTCCATGTAAGC GACGTGGATGCAGCCCTGCAGGGCATTCCTTCCATGAAAGCCGGGGAGGCCGAGAGGGTG ATGATTCAAGGCCTTCCGGAAGGCCCTGACAGCTCCCCGATCAGTACTGGGTTCTGGGAG TGGAAGCCGAAGCTGACTGTGTACTACGAGAGGTCCGGCATGAAGAACAGCAAGGCACCT GCGGTGCTCTTCCTGCCGGGGTTCGGAGTCGGGACGTTCCATTTCGAGAAGCAGCTGAGG GATCTTGGTCGCGATCATCGGGTGTGGACGATGGATTTTCTCGGGCAGGGGATGTCGCTG CCTGGTGAAGATCCTGCTCCTAGTAGCATAGCGAGCGAAGATGCGTTTTGGGGCTTTGGA CAAGATTCGCAGCCTTGGGCAGAGGAGCTGGTGTATTCTGTGGATTTATGGCAAAACCAA GTTCAGCATTTCATTGAGGAGGTTATCCGTGAACCAGTTTATATTGTGGGGAACTCTCTT GGAGGTTTTGTTGCTCTGTATTTTGCTGCATCCAGTCCACACCTTGTAAAAGGTGTCACA CTGCTTAATGCAACACCGTTTTGGGGATTCTTTCCCAACCCTGCTACATCTCCCCGATTG TCAAAGATTTTCCCATGGGCTGGGACATTTCCGCTTCCATCATTTGTGAGGAAAATTACT GAAGCAGTTTGGCAAAAGATAAGTGACCCAAAAAGTATTCAGGACATACTCAAACAAGTA TACGCTGACCATTCAACAAATGTGGACAAAGTATTCTCTCGTATTGTGGAGATAACACAA CACCCAGCAGCTGCTGCATCGTTTGCCTCCATTATGTTTGCTCCAAGGGGTCAGATATCC TTCCAAGAGGCCATCTCTAGGTGCCAAGACCAAGGCATTCCTATATCTCTCATGTATGGA AGAGAAGATCCTTGGATTAGACCTATTTGGGGCCTTAAAGTTAAACAGCAAGTGCCCGAA GCACCTTATTATGAAATTAGCCCCGCTGGTCATTGTCCTCATGATGAGGTCCCTGAGGTA AGGATTGTTCTTTGCTTATAA