Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d015200_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:5:78979002:78984518:1 gene:Zm00001d015200 gene_biotype:protein_coding transcript_biotype:protein_coding description:5'-AMP-activated protein kinase-related
Sequence

ATGGAATGCTTAACAACAAGTTTTCCAAGAAATGTTGGAAAAGAGTACATCTGTTCAAGC
AAGTTGGTGTCCGGAAACCAATGGATCCCCAAAAGGATTTGCTGCTACGTCTCTTGTTCG
ACAAACTCCAGTCGATGCCACAAGTTCACTGATGTGGCATGCCCCATGAGCCCAGTTATT
CGAAAAAGGTTACGCTGGAGATGCTTTGCTGCAAGTTTGAACTTAGAAGATGGCCCTGCA
CCCTCTGACTCGACGTCATCTTCATCAGAGCAGACTACTGATGCTGATGGAACTACTAAT
GGTGATGTATCTGAAAATCTGCTTTCTCGAAAGCCAAGCTCTGATGAGTTAAAGGCTCTT
TTGGCTGATTCGGAACGAAGTAGGCTTTTGAGAAGACTGAGTGAAGCAAATCAATATAAC
CGATTCCTCAAGAGACAGGTTATTTTTGCATCTAGACATTTAATAAAAGGAAAATCAACT
GCCTTGTCCAGAAATCGTGTTTGCAAGCATGAGGTGTTGCAAATAAAGGATGATGCAGTC
GTAAAATTCAAAGGTGAACTTGCTGTTTTGGAACTAGAAATGCAGGCTCTGGTTGGCCTA
GCTGAAGAGGTTGCTAATTTTGATGTTCCGTTAGGGTCTAGGAAGATAAACGGAAAATAT
ATTCAATCTCATCTTCTCTCCAGATTAGAAGCTGTCCATGATAAGATTATGGAACAGGTA
AAGAGTGTTGACGCTTTAAAGACCCAAGAAATTCCTGTCTACTGGATTGGCATGGCTGAG
AATGTGCAGATCATGGGTTCATTCGACGGATGGTCACAGGGCGAGGCGATGTCCATGGAG
TATTCAGGTGACTACGGAAGATTCTCTGCAACTCTGAAGCTAAGACCTGGAAGGTACGAG
ATCAAGTTTTTGGTTGATGGGGAATGGAGATTGTCGCCTGAATATCCCACTGCTGGAGAT
GGACTGACGCAGAACAACATTCTTGTTGTGGAGTAA

Peptide Sequence

PEP ID

Zm00001d015200_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:5:78979002:78984518:1 gene:Zm00001d015200 transcript:Zm00001d015200_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:5'-AMP-activated protein kinase-related
Sequence

MECLTTSFPRNVGKEYICSSKLVSGNQWIPKRICCYVSCSTNSSRCHKFTDVACPMSPVI
RKRLRWRCFAASLNLEDGPAPSDSTSSSSEQTTDADGTTNGDVSENLLSRKPSSDELKAL
LADSERSRLLRRLSEANQYNRFLKRQVIFASRHLIKGKSTALSRNRVCKHEVLQIKDDAV
VKFKGELAVLELEMQALVGLAEEVANFDVPLGSRKINGKYIQSHLLSRLEAVHDKIMEQV
KSVDALKTQEIPVYWIGMAENVQIMGSFDGWSQGEAMSMEYSGDYGRFSATLKLRPGRYE
IKFLVDGEWRLSPEYPTAGDGLTQNNILVVE

Transcript Sequence

Transcript ID

Zm00001d015200_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:78979002:78984518:1 gene:Zm00001d015200 gene_biotype:protein_coding transcript_biotype:protein_coding description:5'-AMP-activated protein kinase-related
Sequence

CGAACGAAGAGGTGAAAGCGACGGCTAGGAACCGTGGCCGCGACCCGCGAACGCAGACGG
CCTCGAGCTCTCCCTCGTCCCCCTGCCCTGCCCGCACCCTCAACCCCCGCCCGCGGGCTC
TTCCTCCGGCCCCCAGGCAGACGCTCTTCGCTCCCCGTCCGCGCCCGGTGCCCAGGGCAC
CCGAGTCCCGCCTCAGCCAGTCCCCCCGCCCCGTGCGTCGCGCAGTCGCGAGAGGTGGTG
GTTTCAGGGGATTATGGAATGCTTAACAACAAGTTTTCCAAGAAATGTTGGAAAAGAGTA
CATCTGTTCAAGCAAGTTGGTGTCCGGAAACCAATGGATCCCCAAAAGGATTTGCTGCTA
CGTCTCTTGTTCGACAAACTCCAGTCGATGCCACAAGTTCACTGATGTGGCATGCCCCAT
GAGCCCAGTTATTCGAAAAAGGTTACGCTGGAGATGCTTTGCTGCAAGTTTGAACTTAGA
AGATGGCCCTGCACCCTCTGACTCGACGTCATCTTCATCAGAGCAGACTACTGATGCTGA
TGGAACTACTAATGGTGATGTATCTGAAAATCTGCTTTCTCGAAAGCCAAGCTCTGATGA
GTTAAAGGCTCTTTTGGCTGATTCGGAACGAAGTAGGCTTTTGAGAAGACTGAGTGAAGC
AAATCAATATAACCGATTCCTCAAGAGACAGGTTATTTTTGCATCTAGACATTTAATAAA
AGGAAAATCAACTGCCTTGTCCAGAAATCGTGTTTGCAAGCATGAGGTGTTGCAAATAAA
GGATGATGCAGTCGTAAAATTCAAAGGTGAACTTGCTGTTTTGGAACTAGAAATGCAGGC
TCTGGTTGGCCTAGCTGAAGAGGTTGCTAATTTTGATGTTCCGTTAGGGTCTAGGAAGAT
AAACGGAAAATATATTCAATCTCATCTTCTCTCCAGATTAGAAGCTGTCCATGATAAGAT
TATGGAACAGGTAAAGAGTGTTGACGCTTTAAAGACCCAAGAAATTCCTGTCTACTGGAT
TGGCATGGCTGAGAATGTGCAGATCATGGGTTCATTCGACGGATGGTCACAGGGCGAGGC
GATGTCCATGGAGTATTCAGGTGACTACGGAAGATTCTCTGCAACTCTGAAGCTAAGACC
TGGAAGGTACGAGATCAAGTTTTTGGTTGATGGGGAATGGAGATTGTCGCCTGAATATCC
CACTGCTGGAGATGGACTGACGCAGAACAACATTCTTGTTGTGGAGTAATACAACTTCCT
CATCTACCATTTCAATCATCCAAACAATGCCGAAGTGCACCTACATCTACATGTCTTCTT
CCATCTGTAATACTATGCTTACTATGTGGACATGTGGTTGCCTCACAGAAATCGAATAAA
TTAGCCTATCCTGGCATATGATCCTTTCGTATTTAAATATATGACGAATAAATTAACCTA
TCCTGAACGTCATATACTTAAAAATGGAGCGAATACCAGTGCTAGATCAC