Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d015184_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:78677042:78680091:-1 gene:Zm00001d015184 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 14

Sequence

ATGGCGCTCCAGGCGCAGCAGCAGGCCACCCCGTCGCCGACGCGCGACAGGGCGGGCAGC
GGCGAGTGGCTGGCCGACACGGAGAAGCTCCCCGGCGCCGCCGCGTCCCCGGAGGACGTC
GTCGTCGCCTCCACGCACCACGCCGCCGCCGCCGCCAGGTACGTGCCGCCGCGCGCCACG
TCGCACACCGCCGAACCGAACCCTGGCCGCGGCGGCGGAGGCGGGTGGTACTCGTGGAAC
GGCGGCCGTCGCGCTCGCCACGATCCGCCCGCGCCGCGGCGGCAGCAGCCCGCGAAGACG
CCCCCGCCCGCCCCGCCTCTGCCTGCGGCTCCCCCTCCCCCTCCCGCTGCCTCTCCGGCT
CCAGCTCCAAGGGCCCCGCCTCCTCACGCGCAGGTCAGGTCGGCCGACCGGGTCGTGCCC
GCCATTCTGTCGCGCAAGCGCCGGGCCGCGGTGATGCAGCGCGCCGCGCTGCTGGCCAGG
GCCGCCGCCGCGGGGCTCTGCCTCGCCGCGCTCGCCGTGCTCGCCTCCGACACTCGCAGG
GGCTGGGCCCGCGACTCCTACAGCAACTACGCCCAGTTCCGGTACTCGGAGGCCGTCAAC
GTCGTCGGCTTCCTGTACTCGGTGTTCCAGTTCGTCGCGCTCGCCGAGCTCATGAGGAGG
AACAAGCATTTGATTCCCCATCCCAAGCGTGATCTCTTCGACTTCACCATGGATCAGGTG
GTAGCATACCTTCTGATATCGTCATCGTCATCAGCAACTGCTCGAGCAAGTGATTTGATT
GAGAACTGGGGGAGCGATTCCTTCCCGAGCATGGCGAACGGCTCCATTGCCATATCTTTC
GTGGCATTTGTTGTTTTCGCCATTTGCTCCCTCATCTCCGCATACAATCTGTTCCGCCGA
GACATGTAG

Peptide Sequence

PEP ID

Zm00001d015184_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:78677042:78680091:-1 gene:Zm00001d015184 transcript:Zm00001d015184_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 14

Sequence

MALQAQQQATPSPTRDRAGSGEWLADTEKLPGAAASPEDVVVASTHHAAAAARYVPPRAT
SHTAEPNPGRGGGGGWYSWNGGRRARHDPPAPRRQQPAKTPPPAPPLPAAPPPPPAASPA
PAPRAPPPHAQVRSADRVVPAILSRKRRAAVMQRAALLARAAAAGLCLAALAVLASDTRR
GWARDSYSNYAQFRYSEAVNVVGFLYSVFQFVALAELMRRNKHLIPHPKRDLFDFTMDQV
VAYLLISSSSSATARASDLIENWGSDSFPSMANGSIAISFVAFVVFAICSLISAYNLFRR
DM

Transcript Sequence

Transcript ID

Zm00001d015184_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:78677042:78680091:-1 gene:Zm00001d015184 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 14

Sequence

CCAGACTCGTACGGAAAAACAGCCCAGTGTATTCCTCTGCCTCCACCCACATGGCGCTCC
AGGCGCAGCAGCAGGCCACCCCGTCGCCGACGCGCGACAGGGCGGGCAGCGGCGAGTGGC
TGGCCGACACGGAGAAGCTCCCCGGCGCCGCCGCGTCCCCGGAGGACGTCGTCGTCGCCT
CCACGCACCACGCCGCCGCCGCCGCCAGGTACGTGCCGCCGCGCGCCACGTCGCACACCG
CCGAACCGAACCCTGGCCGCGGCGGCGGAGGCGGGTGGTACTCGTGGAACGGCGGCCGTC
GCGCTCGCCACGATCCGCCCGCGCCGCGGCGGCAGCAGCCCGCGAAGACGCCCCCGCCCG
CCCCGCCTCTGCCTGCGGCTCCCCCTCCCCCTCCCGCTGCCTCTCCGGCTCCAGCTCCAA
GGGCCCCGCCTCCTCACGCGCAGGTCAGGTCGGCCGACCGGGTCGTGCCCGCCATTCTGT
CGCGCAAGCGCCGGGCCGCGGTGATGCAGCGCGCCGCGCTGCTGGCCAGGGCCGCCGCCG
CGGGGCTCTGCCTCGCCGCGCTCGCCGTGCTCGCCTCCGACACTCGCAGGGGCTGGGCCC
GCGACTCCTACAGCAACTACGCCCAGTTCCGGTACTCGGAGGCCGTCAACGTCGTCGGCT
TCCTGTACTCGGTGTTCCAGTTCGTCGCGCTCGCCGAGCTCATGAGGAGGAACAAGCATT
TGATTCCCCATCCCAAGCGTGATCTCTTCGACTTCACCATGGATCAGGTGGTAGCATACC
TTCTGATATCGTCATCGTCATCAGCAACTGCTCGAGCAAGTGATTTGATTGAGAACTGGG
GGAGCGATTCCTTCCCGAGCATGGCGAACGGCTCCATTGCCATATCTTTCGTGGCATTTG
TTGTTTTCGCCATTTGCTCCCTCATCTCCGCATACAATCTGTTCCGCCGAGACATGTAGC
TGATCCTGACAACTTCATTTCTGAACAAAGTTTTTGGTGCAGGTTTCATGTGTGTATAAA
TGTGATGGGAACTCTGAACTTCTAGCGATGATGTATCTACATGTCAAATGGCAACTCACT
TGTGTGGTAAATGAAATTCAGAAGTTCTCGCAA