Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d015183_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:5:78672491:78677071:1 gene:Zm00001d015183 gene_biotype:protein_coding transcript_biotype:protein_coding description:L-aspartate oxidase chloroplastic
Sequence

ATGGCGAACCTGACGAACGGCTTTGCGAGCCTCCATTGCGCAGGGGCGATGCATGTGGAC
AAAGGGCACATGCAAGCATCGGGACTGCCTTTTCTCTCTTTCAGAAGATGCGCCCAGCTT
GATATCTCCAGACTAGGTAGCGTGCCTCGTTTCATGGGCGCAACATCTGCTACTGTCTCC
CAACATCATGTGAGGCAGAGGATCAGCGCCATCAGAGCCTCTACTCTTTCCTGCCTGCAA
GACGATGCCACAAAATTCTTTGATTTTGTGGTTATTGGCAGCGGTGTTGCTGGCCTAAGG
TATGCTCTGGAAGTTTCAAAGCACGGCTCTGTTGCTATTATCACCAAGGCAGAGCCTCAT
GAGAGCAACACAAACTATGCACAAGGCGGTGTTAGTGCCGTTCTATGCCCCTCGGATTCT
GTAGAAAGTCACATGAAAGACACAATTGTTGCAGGGGCTTATTTGTGCGATGAAGAGATT
GTCAGGGTAGTTTGCACAGAAGGTCCAGAGCGTGTCAAGGAACTAATTGCCATGGGTGCC
TCATTCGACCATGGTGAAGATGGTAGGCTGCACCTTGCAAGGGAAGGTGGTCATTCTCAC
AACAGAATTGTCCATTCTGCCGATATGACTGGAAGAGAGATTGAAAGAGCACTGCTTCAA
GCAGTTCACAATGATGATAACATATCTTTGTTTGGTCATCACTTTGCTATTGATCTATTG
ACATGTCAGAAAAATGGTGAAATCTATTGCTATGGAGTGGATTCAATAGACATTGAAACC
CAGAAGGTAGTCCGCTTCATCTCGAAAGTGACATTGCTTGCATCAGGAGGAGCTGGCCAT
ATATATCCCACAACCACCAATCCACCGGTAGCTACTGGGGACGGAATCGCAATGTGTCAT
CGTGCTCAGGCTGTAATATCCAATATGGAGTTTGTGCAGTTCCATCCAACTGCACTTTCA
GATGAGGGCCTGCCAATAAAGCCAAAGACAAGAAGAGAGAATGCATTTCTCATAACGGAA
GCGGTGAGAGGAGACGGAGGAATTCTTTACAACCAGTCCATGGAGAGATTCATGCCGATG
TACGATGACCGCTCGGAGCTGGCGCCGAGAGACGTGGTTGCGAGGAGCATAGACGACCAG
CTGAAGAAACGAGGCGAAAAGTATGTCCTCCTGGACATCAGCCACAGACCAAGAGACAAG
GTTCTTGCCCACTTCCCCAACATCGCCGCCGAGTGCCTGCGGTACGGCCTGGACATCACC
CGGCAGCCCATCCCGGTGGTCCCGGCGGCGCACTACATGTGCGGCGGCGTCCGGGCAGGG
CTGCAGGGGGAGACCAACGTGAAGGGCCTCTACGTGGCCGGCGAGGTCGCGTGCACGGGG
CTGCACGGTGCCAACCGGCTAGCAAGCAACTCGCTGCTGGAAGCGCTGGTGTTCGCCAGG
AGGGCGGTGCAGCCGTCCATCGACCTCATGGTGGATGCCGACGGAGATGCCAGACCGTCG
CTGGTGGCGAGGTGGGCACGGCCGACGCTGCCGCGGTCGGTGCTGGGCGACAGCGTGCTG
TCGGACATCGTGGGGCGGACGAGGCAGGCCAGGATGGAGCTGCAATCAGTGATGTGGGAG
TATGTCGGCATCGTGCGCTCGACGGGGCGGCTGAAGCAGGCCGAGTGGAGGATCGGTGAC
CTGGAGTCGGAGTGGGAGGAGTTCCTGTTCCGGCGGGGGTGGAAGCCGACCACGGTGGGC
GTCGAGGTCTGCGAGATGCGCAACCTCTTCTGCTGCGCCAAGCTCGTCGTCAGGAGCGCG
CTGGCCAGGCGCGAGAGCCGCGGCCTGCACTTCACCGAGGACTTCCCGTACCTGGAGGAG
AGCAGGAGGAAGCCTACGGTCATCTTCCCGGCCGCCGTGCAGGAGCTCACGTGGAGCTCC
AAGCCGTTGCAGAGGCAGCTGCAAGCAGATGACAATGCATGCAGTTCATCCGGCTGGGCC
TTGGGGATTCGTTAA

Peptide Sequence

PEP ID

Zm00001d015183_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:5:78672491:78677071:1 gene:Zm00001d015183 transcript:Zm00001d015183_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:L-aspartate oxidase chloroplastic
Sequence

MANLTNGFASLHCAGAMHVDKGHMQASGLPFLSFRRCAQLDISRLGSVPRFMGATSATVS
QHHVRQRISAIRASTLSCLQDDATKFFDFVVIGSGVAGLRYALEVSKHGSVAIITKAEPH
ESNTNYAQGGVSAVLCPSDSVESHMKDTIVAGAYLCDEEIVRVVCTEGPERVKELIAMGA
SFDHGEDGRLHLAREGGHSHNRIVHSADMTGREIERALLQAVHNDDNISLFGHHFAIDLL
TCQKNGEIYCYGVDSIDIETQKVVRFISKVTLLASGGAGHIYPTTTNPPVATGDGIAMCH
RAQAVISNMEFVQFHPTALSDEGLPIKPKTRRENAFLITEAVRGDGGILYNQSMERFMPM
YDDRSELAPRDVVARSIDDQLKKRGEKYVLLDISHRPRDKVLAHFPNIAAECLRYGLDIT
RQPIPVVPAAHYMCGGVRAGLQGETNVKGLYVAGEVACTGLHGANRLASNSLLEALVFAR
RAVQPSIDLMVDADGDARPSLVARWARPTLPRSVLGDSVLSDIVGRTRQARMELQSVMWE
YVGIVRSTGRLKQAEWRIGDLESEWEEFLFRRGWKPTTVGVEVCEMRNLFCCAKLVVRSA
LARRESRGLHFTEDFPYLEESRRKPTVIFPAAVQELTWSSKPLQRQLQADDNACSSSGWA
LGIR

Transcript Sequence

Transcript ID

Zm00001d015183_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:78672491:78677071:1 gene:Zm00001d015183 gene_biotype:protein_coding transcript_biotype:protein_coding description:L-aspartate oxidase chloroplastic
Sequence

TTGTCTGATCCGATCTCTCAAAAGTTTCTTTATTATTATTTTGTCGCCGGGATGATTAGA
TCTCCTCCTCTTGTCGCCCAGGAACGATCCCACAACGTTGCCTCGTTGTTTCCTCGGAAT
TCTTGCTTCTCCTGCCCCTTGTTCCTCGGGATTAATCTTGCTTCTTCTGCCTCTGCTCTG
TGAAATTCGAGGTTTTTGATCAATCCCGGTGCTCTGGTGTCGTTGTTTTTCAGGCCCAGG
GAGGCCGCGATGGCGAACCTGACGAACGGCTTTGCGAGCCTCCATTGCGCAGGGGCGATG
CATGTGGACAAAGGGCACATGCAAGCATCGGGACTGCCTTTTCTCTCTTTCAGAAGATGC
GCCCAGCTTGATATCTCCAGACTAGGTAGCGTGCCTCGTTTCATGGGCGCAACATCTGCT
ACTGTCTCCCAACATCATGTGAGGCAGAGGATCAGCGCCATCAGAGCCTCTACTCTTTCC
TGCCTGCAAGACGATGCCACAAAATTCTTTGATTTTGTGGTTATTGGCAGCGGTGTTGCT
GGCCTAAGGTATGCTCTGGAAGTTTCAAAGCACGGCTCTGTTGCTATTATCACCAAGGCA
GAGCCTCATGAGAGCAACACAAACTATGCACAAGGCGGTGTTAGTGCCGTTCTATGCCCC
TCGGATTCTGTAGAAAGTCACATGAAAGACACAATTGTTGCAGGGGCTTATTTGTGCGAT
GAAGAGATTGTCAGGGTAGTTTGCACAGAAGGTCCAGAGCGTGTCAAGGAACTAATTGCC
ATGGGTGCCTCATTCGACCATGGTGAAGATGGTAGGCTGCACCTTGCAAGGGAAGGTGGT
CATTCTCACAACAGAATTGTCCATTCTGCCGATATGACTGGAAGAGAGATTGAAAGAGCA
CTGCTTCAAGCAGTTCACAATGATGATAACATATCTTTGTTTGGTCATCACTTTGCTATT
GATCTATTGACATGTCAGAAAAATGGTGAAATCTATTGCTATGGAGTGGATTCAATAGAC
ATTGAAACCCAGAAGGTAGTCCGCTTCATCTCGAAAGTGACATTGCTTGCATCAGGAGGA
GCTGGCCATATATATCCCACAACCACCAATCCACCGGTAGCTACTGGGGACGGAATCGCA
ATGTGTCATCGTGCTCAGGCTGTAATATCCAATATGGAGTTTGTGCAGTTCCATCCAACT
GCACTTTCAGATGAGGGCCTGCCAATAAAGCCAAAGACAAGAAGAGAGAATGCATTTCTC
ATAACGGAAGCGGTGAGAGGAGACGGAGGAATTCTTTACAACCAGTCCATGGAGAGATTC
ATGCCGATGTACGATGACCGCTCGGAGCTGGCGCCGAGAGACGTGGTTGCGAGGAGCATA
GACGACCAGCTGAAGAAACGAGGCGAAAAGTATGTCCTCCTGGACATCAGCCACAGACCA
AGAGACAAGGTTCTTGCCCACTTCCCCAACATCGCCGCCGAGTGCCTGCGGTACGGCCTG
GACATCACCCGGCAGCCCATCCCGGTGGTCCCGGCGGCGCACTACATGTGCGGCGGCGTC
CGGGCAGGGCTGCAGGGGGAGACCAACGTGAAGGGCCTCTACGTGGCCGGCGAGGTCGCG
TGCACGGGGCTGCACGGTGCCAACCGGCTAGCAAGCAACTCGCTGCTGGAAGCGCTGGTG
TTCGCCAGGAGGGCGGTGCAGCCGTCCATCGACCTCATGGTGGATGCCGACGGAGATGCC
AGACCGTCGCTGGTGGCGAGGTGGGCACGGCCGACGCTGCCGCGGTCGGTGCTGGGCGAC
AGCGTGCTGTCGGACATCGTGGGGCGGACGAGGCAGGCCAGGATGGAGCTGCAATCAGTG
ATGTGGGAGTATGTCGGCATCGTGCGCTCGACGGGGCGGCTGAAGCAGGCCGAGTGGAGG
ATCGGTGACCTGGAGTCGGAGTGGGAGGAGTTCCTGTTCCGGCGGGGGTGGAAGCCGACC
ACGGTGGGCGTCGAGGTCTGCGAGATGCGCAACCTCTTCTGCTGCGCCAAGCTCGTCGTC
AGGAGCGCGCTGGCCAGGCGCGAGAGCCGCGGCCTGCACTTCACCGAGGACTTCCCGTAC
CTGGAGGAGAGCAGGAGGAAGCCTACGGTCATCTTCCCGGCCGCCGTGCAGGAGCTCACG
TGGAGCTCCAAGCCGTTGCAGAGGCAGCTGCAAGCAGATGACAATGCATGCAGTTCATCC
GGCTGGGCCTTGGGGATTCGTTAATTCATTCATTAATTTTTAAGAACTCTCAGTCGACAG
CATACACAAAATCCAGACAGTTAGGCTGTAGTAGCCTGCGTATCTTTGCAATTCTTGCCA
GTTCCAGCTGTTGCAACTTGTAAACGGTGTTGTTGGAGCTGCATTATGGTTTATGAACCT
TGATCCGTAGTATATGTATGTGGTGATTGGCTGATTGCACACCAACTGATGACCATTGTG
ATGTCATGCAGAAAAAATTGCGAGAACTTCTGAATTTCATTTACCAC