Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015148_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:5:76961130:76964643:-1 gene:Zm00001d015148 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised conserved protein (UCP030365)
Sequence	ATGGACCCAGCGGGGCCGCGCGTGGCCACGGATCCCGCCGGATCGGGTGCCGCACCGCCG CGCGAGGAATTGGACAGGAGAGGAGGGGCGTGCAGCGGCGCCGCAGCGGCGGAGGGGAGC GCGTCGCGGCTCGCGGGCGCTGGACTGGGAGATCCGAGGGCTGGAATTCTGGAATCTTCA GGTCAAGCAGAAGCATATTTGCACACATGTACCATGGATGTTTCTCAGTTGACTGCTGAA GGTGTCACCCAGTGTGGAGCTAGAGTGTCTTTATTACCCCAGATTGGGGCACTTCAGTCA GAAACTCCTTGTCTGACCTTGGGCCGTGATTCCAGTGCAGAATCAATGGAGAAGCTGCAT GGCAGTGAGTCCTTGCCATGCTGTAAAGAGAACATCGGAACAGTTCGCCAACCTAAGCCT GATCCAGAACATGTTGACAATAGGATGAGTGTTGCACGTCTTGGGTTGGACCTTAACACA GTAGATAGTTCTGATGCAGCAGAGCTTAACCCTTTCTTCCCTTACAAGAAGCTGGGACAG TCGAAAGTCAGTGATCCATCGGAATGTGGCAGCACTACTGCTGCTACAGCAGAAAGTGAG TCACACAGGAAATGGAGAGAAATGAAGCGGAATGGCTTTCTTTCTTCGTCTCATGGAAAT GCAGTGGTGCCTAGGCCACGTGGTCGGCCCCCGAAAAGGAAAAAAGATGATGAATTCAAA AGGAGCACTTCCACACAGCATGGCCAGGCTAACAAGTCTGTTAAGGTTGCTGCTCCTAGT GGCCTATTATCTGGGCTAAACCCTGGAATCATTAACCATGTGAGAAATAGCAAGCAAGTT TACTCCATAATAAAGGCTATGGTACACTCTGAGAGGCTTGAGAATGAGAAGCAGCCTGCA TTTACTAGTCAAACAGGTGGAAGAGGGAGAGAAGCCAGTGAGGGAATTCAGGATGAGAAA TATGGTGCTGGTTTCAAGAAGTGCCATATGTTGATGAAAGACAATAATGCGGTGTTTCAC CAAGCACTGCCTACCACATCACAGTTCCTTGCACAGGACGGCGATAGGCTCAAACTGCAA CTCTCATCAGCAGTCACTATGTCTTCAGACAGGGCCTGCAGTACATCAGCTGATGATCCA GCAACTAATCATGATTACATGACTGTACTGTCAGTAAAAGCGGCCTCTGTTGCTTCTCAG TGGTTGGAATTACTGCATCAGGACATCAGGGGACGCCTTGCTGCTTTAAAGCGCAGCAGG AAGAGAGTCAGAAATGCTCTTCATACAGAATTGCCTTACCTAATCTCGACAGAATTTTCA TCTAACCAAGAGAATGAATCATCCATTGCAAATACGTGTGATGCTGGATGTACTGAAAAA GCAGTTTCAGAAGCGCATGTGGCACGATGGAGGTCTCTGTTTGTCCAGATGGACCGAGCA CTTCAGGAGGAAGGGAAACAGCTGGAGAACCGGTTGAAGCAAGTGCAAGAAATGCAATCG AATTGTGATAAAGGCCTCAAACACATGAGCTGTGAAGCTCCTCTGCTAGGACCTATTCCT GAGCTATGGAAGCTGAAGAACCCAGATATTTCTGAGAGTGAGTGGGCGGTGCAAGCTGCC GCCGCATCAATCTACTCGACCTGCAACATGGCCATGAGAACGGAGAACGTGCCTTGCTTC TGA

Peptide Sequence

PEP ID	Zm00001d015148_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:5:76961130:76964643:-1 gene:Zm00001d015148 transcript:Zm00001d015148_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised conserved protein (UCP030365)
Sequence	MDPAGPRVATDPAGSGAAPPREELDRRGGACSGAAAAEGSASRLAGAGLGDPRAGILESS GQAEAYLHTCTMDVSQLTAEGVTQCGARVSLLPQIGALQSETPCLTLGRDSSAESMEKLH GSESLPCCKENIGTVRQPKPDPEHVDNRMSVARLGLDLNTVDSSDAAELNPFFPYKKLGQ SKVSDPSECGSTTAATAESESHRKWREMKRNGFLSSSHGNAVVPRPRGRPPKRKKDDEFK RSTSTQHGQANKSVKVAAPSGLLSGLNPGIINHVRNSKQVYSIIKAMVHSERLENEKQPA FTSQTGGRGREASEGIQDEKYGAGFKKCHMLMKDNNAVFHQALPTTSQFLAQDGDRLKLQ LSSAVTMSSDRACSTSADDPATNHDYMTVLSVKAASVASQWLELLHQDIRGRLAALKRSR KRVRNALHTELPYLISTEFSSNQENESSIANTCDAGCTEKAVSEAHVARWRSLFVQMDRA LQEEGKQLENRLKQVQEMQSNCDKGLKHMSCEAPLLGPIPELWKLKNPDISESEWAVQAA AASIYSTCNMAMRTENVPCF

Transcript Sequence

Transcript ID	Zm00001d015148_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:76961130:76964643:-1 gene:Zm00001d015148 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised conserved protein (UCP030365)
Sequence	ATTTCAAAACCGCGCAGGATAGTCGCGTCTCTTCTCATCCTTCCCGTCTCTCCCCCGCTC CGCTCCACCCCGCTCAAAAACCCTAGGCGGCGCCCGAATCCCGGATCCCGCGTCCGGCTC CCCCAGCGCCTCCGCCCGTGCTCGGCGTCCATCGTTGCCGGCCTCCCCGATGGACCCAGC GGGGCCGCGCGTGGCCACGGATCCCGCCGGATCGGGTGCCGCACCGCCGCGCGAGGAATT GGACAGGAGAGGAGGGGCGTGCAGCGGCGCCGCAGCGGCGGAGGGGAGCGCGTCGCGGCT CGCGGGCGCTGGACTGGGAGATCCGAGGGCTGGAATTCTGGAATCTTCAGGTCAAGCAGA AGCATATTTGCACACATGTACCATGGATGTTTCTCAGTTGACTGCTGAAGGTGTCACCCA GTGTGGAGCTAGAGTGTCTTTATTACCCCAGATTGGGGCACTTCAGTCAGAAACTCCTTG TCTGACCTTGGGCCGTGATTCCAGTGCAGAATCAATGGAGAAGCTGCATGGCAGTGAGTC CTTGCCATGCTGTAAAGAGAACATCGGAACAGTTCGCCAACCTAAGCCTGATCCAGAACA TGTTGACAATAGGATGAGTGTTGCACGTCTTGGGTTGGACCTTAACACAGTAGATAGTTC TGATGCAGCAGAGCTTAACCCTTTCTTCCCTTACAAGAAGCTGGGACAGTCGAAAGTCAG TGATCCATCGGAATGTGGCAGCACTACTGCTGCTACAGCAGAAAGTGAGTCACACAGGAA ATGGAGAGAAATGAAGCGGAATGGCTTTCTTTCTTCGTCTCATGGAAATGCAGTGGTGCC TAGGCCACGTGGTCGGCCCCCGAAAAGGAAAAAAGATGATGAATTCAAAAGGAGCACTTC CACACAGCATGGCCAGGCTAACAAGTCTGTTAAGGTTGCTGCTCCTAGTGGCCTATTATC TGGGCTAAACCCTGGAATCATTAACCATGTGAGAAATAGCAAGCAAGTTTACTCCATAAT AAAGGCTATGGTACACTCTGAGAGGCTTGAGAATGAGAAGCAGCCTGCATTTACTAGTCA AACAGGTGGAAGAGGGAGAGAAGCCAGTGAGGGAATTCAGGATGAGAAATATGGTGCTGG TTTCAAGAAGTGCCATATGTTGATGAAAGACAATAATGCGGTGTTTCACCAAGCACTGCC TACCACATCACAGTTCCTTGCACAGGACGGCGATAGGCTCAAACTGCAACTCTCATCAGC AGTCACTATGTCTTCAGACAGGGCCTGCAGTACATCAGCTGATGATCCAGCAACTAATCA TGATTACATGACTGTACTGTCAGTAAAAGCGGCCTCTGTTGCTTCTCAGTGGTTGGAATT ACTGCATCAGGACATCAGGGGACGCCTTGCTGCTTTAAAGCGCAGCAGGAAGAGAGTCAG AAATGCTCTTCATACAGAATTGCCTTACCTAATCTCGACAGAATTTTCATCTAACCAAGA GAATGAATCATCCATTGCAAATACGTGTGATGCTGGATGTACTGAAAAAGCAGTTTCAGA AGCGCATGTGGCACGATGGAGGTCTCTGTTTGTCCAGATGGACCGAGCACTTCAGGAGGA AGGGAAACAGCTGGAGAACCGGTTGAAGCAAGTGCAAGAAATGCAATCGAATTGTGATAA AGGCCTCAAACACATGAGCTGTGAAGCTCCTCTGCTAGGACCTATTCCTGAGCTATGGAA GCTGAAGAACCCAGATATTTCTGAGAGTGAGTGGGCGGTGCAAGCTGCCGCCGCATCAAT CTACTCGACCTGCAACATGGCCATGAGAACGGAGAACGTGCCTTGCTTCTGACCTCACAC TTGTAGTTGTAGTTTAGTTTCTTGCTTTTGCTGATTTTTACCTCAAAAGTTAGGCCTCTT TTATTACCTTCAGTCTTTGTGAATTGTGACCCCTTGTCCATACACTAGCGGCGAGTCATG TAACGAGGAAGAAACTTGATGTATGTTGTCACCGTCCTACGATTTCACGGGCCCGTGAAA GAACACATTCTTTTTATACAC