Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015123_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:5:76475902:76478923:-1 gene:Zm00001d015123 gene_biotype:protein_coding transcript_biotype:protein_coding description:SINA2%3B Ubiquitin ligase SINAT2
Sequence	ATGGCACCGGGAAGCAGCATTGTGACTGTAGTCCCCGAGTCGGACTGTGGAGATGACGAT GGGCTTTCTGAATCACTTGGGGGTATCATGCTTGACGTAGACTCTGCAAGTAAACCGTGG TCTACATCGGCATCGCTAGCCAATGTTGCATTGTCGTCGCTGTGTGGCTTGAATGATTTG CTCGAATGCCCAGTGTGTACCAACTCGATGCGCCCACCTATACTCCAGTGCCCAAATGGC CACACGATCTGCTCTAGTTGCAAGCACAGGGTAGAGAACCATTGCCCAACCTGTCGCCAG GAACTGGGAAACATCAGGTGCCTAGCTCTCGAGAAGGTGGCAGAGCAACTCCAGCTTCCG TGCAAGTACCAGAGCACGGGATGCACCGAGATCCACCCATACAAGAGCAAACTGAAGCAC GAGGAGCTCTGCAGGTTCAGGCCGTACAGCTGCCCGTACGCAGGTTCCGAGTGCCTGATC GCAGGCGACGTCCCGTTCCTGGTGTCCCATCTCATCAACGACCATAAGGTGGACTTGCAC GAGGGCTGCACGTTCAACCACCGGTACGTGAAGCCCAACCCGTACGAGGTGGAGAATGCC ACGTGGATGCTCACTGTAAGTAGAATGACGAGTTCTGTTCGTGCTTAG

Peptide Sequence

PEP ID	Zm00001d015123_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:5:76475902:76478923:-1 gene:Zm00001d015123 transcript:Zm00001d015123_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:SINA2%3B Ubiquitin ligase SINAT2
Sequence	MAPGSSIVTVVPESDCGDDDGLSESLGGIMLDVDSASKPWSTSASLANVALSSLCGLNDL LECPVCTNSMRPPILQCPNGHTICSSCKHRVENHCPTCRQELGNIRCLALEKVAEQLQLP CKYQSTGCTEIHPYKSKLKHEELCRFRPYSCPYAGSECLIAGDVPFLVSHLINDHKVDLH EGCTFNHRYVKPNPYEVENATWMLTVSRMTSSVRA

Transcript Sequence

Transcript ID	Zm00001d015123_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:76475902:76478923:-1 gene:Zm00001d015123 gene_biotype:protein_coding transcript_biotype:protein_coding description:SINA2%3B Ubiquitin ligase SINAT2
Sequence	ATACACTACTGCACGTCTACACTAGTACTGACTACTGAGGTGGCCCGAACAACCTTTATC CGATTATCCCCCCGCATTATCTCTCTCGGTAGTTCCCCCGTCCCCCTCGCGTGCGCTCTG TGGCGACGACTGCTCGGCCGCCGCCGCCCTACGCGCAGGCGCCCAGGTTTCCACCTTCGC CGGCGACGAGCGCCCACAAGGAAAACAATGGAGTGGTGGGCTGCTGATGGTTTGTACTAC TTCCGGACCTGAAAGGAGCTTTTTACAATGGCACCGGGAAGCAGCATTGTGACTGTAGTC CCCGAGTCGGACTGTGGAGATGACGATGGGCTTTCTGAATCACTTGGGGGTATCATGCTT GACGTAGACTCTGCAAGTAAACCGTGGTCTACATCGGCATCGCTAGCCAATGTTGCATTG TCGTCGCTGTGTGGCTTGAATGATTTGCTCGAATGCCCAGTGTGTACCAACTCGATGCGC CCACCTATACTCCAGTGCCCAAATGGCCACACGATCTGCTCTAGTTGCAAGCACAGGGTA GAGAACCATTGCCCAACCTGTCGCCAGGAACTGGGAAACATCAGGTGCCTAGCTCTCGAG AAGGTGGCAGAGCAACTCCAGCTTCCGTGCAAGTACCAGAGCACGGGATGCACCGAGATC CACCCATACAAGAGCAAACTGAAGCACGAGGAGCTCTGCAGGTTCAGGCCGTACAGCTGC CCGTACGCAGGTTCCGAGTGCCTGATCGCAGGCGACGTCCCGTTCCTGGTGTCCCATCTC ATCAACGACCATAAGGTGGACTTGCACGAGGGCTGCACGTTCAACCACCGGTACGTGAAG CCCAACCCGTACGAGGTGGAGAATGCCACGTGGATGCTCACTGTAAGTAGAATGACGAGT TCTGTTCGTGCTTAGGTTTAGATACATGGGGAATTTTGCTGGTTATTTGATCTGGATTAT ATCTGTATGGTAGATATATGCATTTGACTAAAGTGACCTGCATAGCGATCTTCCTAACTA ATAAACTTACTTCTGAGACGTCTTGTTTTTTTCTGAATGTGATCACACACTTGTGACTTG TGTTTGATACATGCAGGTTTTCAAGTGTTTCGGGCAGCACTTCTGCCTGCACTTCGAGGC GTTCGTGCTGGGGATGGCGCCGGTGTACATGGCGTTCCTGCGGTTCATGGGCGAGGAGAG CGAGGCGCAGGGGTTCGGGTACAGCCTGGAGGTGGGCGGGGGCGGGCGGAAGCTGACGTG GCAGGGCACGCCGCGGAGCGTCAGGGACAGCCACCGGAAGGTGCGGGACAGCTTCGACGG GCTCATCATCCACAGGAACATGGCGCTCTTCTTCTCGGGCGGCGGCAGGCAGGAGCTCAA GCTGCGGGTCACCGGCCGCATCTGGAGGGAGCAAGGGCAATGAAAAGCACCCCCGCACAC ATTCCGTTGACTGGTGGTTATGGTGGTACACCGCTGTGTTCCATTCCATCCCATCATCCG GGGGCAGCCTTCTGCTCAGCTCCTCGCCATGATTCAAGACCCCATTCCGTGTTCGTCCTG TGCATTTGCTGTATGTACAGATATTTTGCATACCTAGCCTGGAACTAGACCGTCTGCAGA CATGATTAACACGTGGGGAAAGCCCCGGCAAAACCTGCCAGTCTG