Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015114_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:76214366:76217107:1 gene:Zm00001d015114 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCCCGCATCCTCCTCGCCCAGTTCTCCCGCCGCCGGCTCCACGCTCACCTCTCGCGT CCCCTCGCCATTCTCTCGAACGCCTTCTCGGCGTCCGCCGCCTCGTCTCGGCCGCGCCCG CCGCCGCTCCCGCCACTCTCTCCGCTGCTCCCAGCGCGCCCCGAGGACGCGCGCCTCGTA GCCGCGTCCTCGTCCGCCATCGCCGCCGCCTTCCACGACTGGTTCCACGAGTCCCGCAAC TCCGCTTCTGCGCCGACACCGCCCAAGGCGCTCGACGCGATCTACGAGGCGCTCGCGTCC GATGAGACGGCCCCGCTAGAGGCGCTCCCGCTCTCGGAGACGCTCGTCCTCGCCGTGCTC CGCCACCATCCGAGGGGGTTCCACAACGACGCCGCCCTGCTGCTGCTCCGCCTCAAGTTC TTCGACTGGTCGGGCCGTCACCGGCGCTACCACCACACGCGGGCCGTCTACCACACCGTC TTCCGCCTCCTTAGATGCGCGCGCCGCAATGCCGTCCTTCTCGATTGGCTCCACCGCTTC TTCGACACCTCCGCGAGAGGCGGCCACCTGCGTTTCCACGACACGCTCATCATCGGCTAT GCCATCGCGGGCGACCCGCAGCGCGGGCTCAACATCTTCGGCCGCATGCGCTTCCACGGC CTCGACCCCGACCCCGTCTCTTCACGTATCCTCCTCAACTCCCTGGTCGATGCGTCGATG CACGATCTTGCCGAGTCCTTCGCCCACAACCTTGCCCCCAGCCCCGTCGCTACAAGCATA TGCATCAAGAGCCTCTGTCGTCGCGCCCGCCTCGACGATGCCGTTGCTCTCCTCGACACC ATGCCGTTTGCTGATGCATCCCGTGGCCCGGCGGCTGGCTGCATCCTCACCGAGTTCTGC CGCCGTGGACGTTTTGCGGAGGCAAGCGAGCTCGTTAGTAAGTTTCCATCCAGTGATGTG TATGGTGCGTGGATCAATGGACTCTTTGGTGCTGGCGAGCTTGATGCTACGATGAAGTTC CTCTCTGATAAGAAGGAAAGTGAAGGCTACATCCTTGATGGGCGGCGGTGTGACAGCCTT ATTTATCGCTTGCTTGTCAGGAACAGACTTGGCGAAGTGTATGACTTGCTTGTTCAAATG ATGGAGGAGGGCATTGCTCCTGGCATACGCACCATGAATGCTGCGCTTTGCTTCTTTTGC AAGGCTGGTCTTGTTGAAGTAGCCATGGATTTGTATAGGTCGAGAGTGGAGCTCGGGATC AACCCAAACAAAGATGTCTACCATAATCTGATCAAGGCACTGTGCCATGGTGGGGAGACA GAGGAAGCATGCCTGGTATTTGAGGAAACTATGGAAGGAGGGTACTTCCCGGGGCGTCGG ACATTTACCATGCTTTCAAACGTGCTGTGTCAGGAGGGGAAGCTGGACAGGGTGCGGGAG CTGCTAAATAGGGCAGTCAAGCAGGAAGCCTGGGCAGTTGACTCTGTTTTGGCCAAGTAC CTCGCGGCACTATGCAAGAGTGGGAACATGGAGGCGGCATGCGAACTGCCTCATGTAGCA AGCAGCAAGAGCCATGTGGGCTTATATCGCTATGAGTCAACATACAAGAACCTGATTCGA GCATTGGTATTGACTAAGAGGGTGGACGCGCTGCCAAGGCTTATACTGCAAATGCAAGAA ATGGGGCACATCCCAAGCCGGAGCCTCTATGTGTCAGTTGTCTGTTCTTTGTGTGAAATG AATAGGTATGCCGAGGTTCTTGATCTGTTAGACAACCAGTTAATGCGGAATGAGATCCAT CCCGTTGTGTGCTACAACCACTTCATTTCTGGTGCTGGTCATGCTAAGAGGGCAGACATG GCCAAGGCGATATATGACCGAATGGAGGCTTCAGGGATTGAACCATCAATAACAAGCAAC GTGCTTCTTCTCATTAGTTATGTAAGGAGCAAAAATCTCGGGGGTGCACTTAATTTTTTT AACCTCGTTCGTCGGAAGAAAACACCTTGTGCCAGGTTATATAATGTATTTATATCTGGC CTATGTGAAGTTAGGAAGCCTGAGCAGGCAATGATGTTCTTTAGGGAAGCAAGGGATAAT GGTATAATCCCAAGCATGTACTGCTACGAGAATCTTCTTCTCTTGCTGTGCTCTGTTAGC GATTATACCAATGCTGTAAAGGTTGTTGATGATTTCAGAGAAACGGGTCGCCCTGTTTCA GCTTTCTTGACTAATGTTCTTCTGTTGCACACATTGATGGGCCACAAGCTTCTGCAGGCT TTTTTACGTTCAAGAGATAAATCAAAGCCTCTAGAACTGAAAGGTGAAGATATCCAAGGT CGGAAGGCAGGAAGGCTCTTGATTGGTGATCTAGTTGCCTCGTTTGCAAGTGGTATCAGA AACATGAGTGACTTAGAGCATTTGGGAGAGGAGATGGAAAAGTATTTTCCTGTTGATATT TACACTTATAACATGCTGTTACGAGGGTTCTCTATGGCAGGAAGGATGGACTCTGCCTGT AGGTTGTATGAAAGGATATGCAGGCAAGGGTATCAACCAAATCGATGGACTTTTGATACA ATTGTGCATGGGTTCTGCAAGAATGGTGACATAATTGAAGCTCAGAGGTGGATGGATGCA TTGTATCGAAGTGGTTTCTATCCCACTTGGTACACTATGAGGGTATACAACAATTTGTTG TTGCGAGCACAAGACAAGAAGATCATTTCTTTGTATGAGTAA

Peptide Sequence

PEP ID	Zm00001d015114_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:76214366:76217107:1 gene:Zm00001d015114 transcript:Zm00001d015114_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MPRILLAQFSRRRLHAHLSRPLAILSNAFSASAASSRPRPPPLPPLSPLLPARPEDARLV AASSSAIAAAFHDWFHESRNSASAPTPPKALDAIYEALASDETAPLEALPLSETLVLAVL RHHPRGFHNDAALLLLRLKFFDWSGRHRRYHHTRAVYHTVFRLLRCARRNAVLLDWLHRF FDTSARGGHLRFHDTLIIGYAIAGDPQRGLNIFGRMRFHGLDPDPVSSRILLNSLVDASM HDLAESFAHNLAPSPVATSICIKSLCRRARLDDAVALLDTMPFADASRGPAAGCILTEFC RRGRFAEASELVSKFPSSDVYGAWINGLFGAGELDATMKFLSDKKESEGYILDGRRCDSL IYRLLVRNRLGEVYDLLVQMMEEGIAPGIRTMNAALCFFCKAGLVEVAMDLYRSRVELGI NPNKDVYHNLIKALCHGGETEEACLVFEETMEGGYFPGRRTFTMLSNVLCQEGKLDRVRE LLNRAVKQEAWAVDSVLAKYLAALCKSGNMEAACELPHVASSKSHVGLYRYESTYKNLIR ALVLTKRVDALPRLILQMQEMGHIPSRSLYVSVVCSLCEMNRYAEVLDLLDNQLMRNEIH PVVCYNHFISGAGHAKRADMAKAIYDRMEASGIEPSITSNVLLLISYVRSKNLGGALNFF NLVRRKKTPCARLYNVFISGLCEVRKPEQAMMFFREARDNGIIPSMYCYENLLLLLCSVS DYTNAVKVVDDFRETGRPVSAFLTNVLLLHTLMGHKLLQAFLRSRDKSKPLELKGEDIQG RKAGRLLIGDLVASFASGIRNMSDLEHLGEEMEKYFPVDIYTYNMLLRGFSMAGRMDSAC RLYERICRQGYQPNRWTFDTIVHGFCKNGDIIEAQRWMDALYRSGFYPTWYTMRVYNNLL LRAQDKKIISLYE

Transcript Sequence

Transcript ID	Zm00001d015114_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:76214366:76217107:1 gene:Zm00001d015114 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCCCGCATCCTCCTCGCCCAGTTCTCCCGCCGCCGGCTCCACGCTCACCTCTCGCGT CCCCTCGCCATTCTCTCGAACGCCTTCTCGGCGTCCGCCGCCTCGTCTCGGCCGCGCCCG CCGCCGCTCCCGCCACTCTCTCCGCTGCTCCCAGCGCGCCCCGAGGACGCGCGCCTCGTA GCCGCGTCCTCGTCCGCCATCGCCGCCGCCTTCCACGACTGGTTCCACGAGTCCCGCAAC TCCGCTTCTGCGCCGACACCGCCCAAGGCGCTCGACGCGATCTACGAGGCGCTCGCGTCC GATGAGACGGCCCCGCTAGAGGCGCTCCCGCTCTCGGAGACGCTCGTCCTCGCCGTGCTC CGCCACCATCCGAGGGGGTTCCACAACGACGCCGCCCTGCTGCTGCTCCGCCTCAAGTTC TTCGACTGGTCGGGCCGTCACCGGCGCTACCACCACACGCGGGCCGTCTACCACACCGTC TTCCGCCTCCTTAGATGCGCGCGCCGCAATGCCGTCCTTCTCGATTGGCTCCACCGCTTC TTCGACACCTCCGCGAGAGGCGGCCACCTGCGTTTCCACGACACGCTCATCATCGGCTAT GCCATCGCGGGCGACCCGCAGCGCGGGCTCAACATCTTCGGCCGCATGCGCTTCCACGGC CTCGACCCCGACCCCGTCTCTTCACGTATCCTCCTCAACTCCCTGGTCGATGCGTCGATG CACGATCTTGCCGAGTCCTTCGCCCACAACCTTGCCCCCAGCCCCGTCGCTACAAGCATA TGCATCAAGAGCCTCTGTCGTCGCGCCCGCCTCGACGATGCCGTTGCTCTCCTCGACACC ATGCCGTTTGCTGATGCATCCCGTGGCCCGGCGGCTGGCTGCATCCTCACCGAGTTCTGC CGCCGTGGACGTTTTGCGGAGGCAAGCGAGCTCGTTAGTAAGTTTCCATCCAGTGATGTG TATGGTGCGTGGATCAATGGACTCTTTGGTGCTGGCGAGCTTGATGCTACGATGAAGTTC CTCTCTGATAAGAAGGAAAGTGAAGGCTACATCCTTGATGGGCGGCGGTGTGACAGCCTT ATTTATCGCTTGCTTGTCAGGAACAGACTTGGCGAAGTGTATGACTTGCTTGTTCAAATG ATGGAGGAGGGCATTGCTCCTGGCATACGCACCATGAATGCTGCGCTTTGCTTCTTTTGC AAGGCTGGTCTTGTTGAAGTAGCCATGGATTTGTATAGGTCGAGAGTGGAGCTCGGGATC AACCCAAACAAAGATGTCTACCATAATCTGATCAAGGCACTGTGCCATGGTGGGGAGACA GAGGAAGCATGCCTGGTATTTGAGGAAACTATGGAAGGAGGGTACTTCCCGGGGCGTCGG ACATTTACCATGCTTTCAAACGTGCTGTGTCAGGAGGGGAAGCTGGACAGGGTGCGGGAG CTGCTAAATAGGGCAGTCAAGCAGGAAGCCTGGGCAGTTGACTCTGTTTTGGCCAAGTAC CTCGCGGCACTATGCAAGAGTGGGAACATGGAGGCGGCATGCGAACTGCCTCATGTAGCA AGCAGCAAGAGCCATGTGGGCTTATATCGCTATGAGTCAACATACAAGAACCTGATTCGA GCATTGGTATTGACTAAGAGGGTGGACGCGCTGCCAAGGCTTATACTGCAAATGCAAGAA ATGGGGCACATCCCAAGCCGGAGCCTCTATGTGTCAGTTGTCTGTTCTTTGTGTGAAATG AATAGGTATGCCGAGGTTCTTGATCTGTTAGACAACCAGTTAATGCGGAATGAGATCCAT CCCGTTGTGTGCTACAACCACTTCATTTCTGGTGCTGGTCATGCTAAGAGGGCAGACATG GCCAAGGCGATATATGACCGAATGGAGGCTTCAGGGATTGAACCATCAATAACAAGCAAC GTGCTTCTTCTCATTAGTTATGTAAGGAGCAAAAATCTCGGGGGTGCACTTAATTTTTTT AACCTCGTTCGTCGGAAGAAAACACCTTGTGCCAGGTTATATAATGTATTTATATCTGGC CTATGTGAAGTTAGGAAGCCTGAGCAGGCAATGATGTTCTTTAGGGAAGCAAGGGATAAT GGTATAATCCCAAGCATGTACTGCTACGAGAATCTTCTTCTCTTGCTGTGCTCTGTTAGC GATTATACCAATGCTGTAAAGGTTGTTGATGATTTCAGAGAAACGGGTCGCCCTGTTTCA GCTTTCTTGACTAATGTTCTTCTGTTGCACACATTGATGGGCCACAAGCTTCTGCAGGCT TTTTTACGTTCAAGAGATAAATCAAAGCCTCTAGAACTGAAAGGTGAAGATATCCAAGGT CGGAAGGCAGGAAGGCTCTTGATTGGTGATCTAGTTGCCTCGTTTGCAAGTGGTATCAGA AACATGAGTGACTTAGAGCATTTGGGAGAGGAGATGGAAAAGTATTTTCCTGTTGATATT TACACTTATAACATGCTGTTACGAGGGTTCTCTATGGCAGGAAGGATGGACTCTGCCTGT AGGTTGTATGAAAGGATATGCAGGCAAGGGTATCAACCAAATCGATGGACTTTTGATACA ATTGTGCATGGGTTCTGCAAGAATGGTGACATAATTGAAGCTCAGAGGTGGATGGATGCA TTGTATCGAAGTGGTTTCTATCCCACTTGGTACACTATGAGGGTATACAACAATTTGTTG TTGCGAGCACAAGACAAGAAGATCATTTCTTTGTATGAGTAA