Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d015101_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:75377186:75378281:1 gene:Zm00001d015101 gene_biotype:protein_coding transcript_biotype:protein_coding description: protein; Pentatricopeptide (PPR) repeat-containing protein-like
Sequence

ATGGGTCTTAACTTCAGTGTACTCAACACATTCGGAGTCCCAGGGCTGAGGGGGGCGACT
ACCAAGCAGGTTTATGAGCGGCATTTCGCGAACAAGGAAACCAAGGAGTTCAAAGATTTC
CACATTGCCTACGTCGAGTTCTGCAAGTATTTCAACACGGTGATGCCCGGTCAGGATTTT
GACACTCCATCTACTACGGTGATTCAGAAATTCTTTGAAGACGAGTGGAAGCCGGAGAAG
AACGAGGAGGAGAGGAAGAGGAAGTTCCTGGAGTTCATGAGGAAGAAGGTGAGGGAGGCC
AAGGTGGACGACAGCTTCTTCATCGCGGCGGGGCTGGCGGTGCCGGTGGCGGCCGTCATC
GGCAAGAGGGCCAGCGGGCAGATCCCCTACGTGAAGAGCGTGAGGCTGGACCTGGTCCCC
AACGTCGTGTTCGTGCCGTTCGTGACGCTGCTCGGCATCATGGGCGCCACCGCGTGGCAG
ATGGGCAACAAGAGCGCTGTCGCCCAGGAGGACGAGGACGCCAACGAGGAGGAGAAGAAG
AAGGAGACGATGAAGCGCGCGGCGGGGCAGCAGCAGCAGGAGGAGCAAAACAGGTCGCCT
TGA

Peptide Sequence

PEP ID

Zm00001d015101_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:75377186:75378281:1 gene:Zm00001d015101 transcript:Zm00001d015101_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description: protein; Pentatricopeptide (PPR) repeat-containing protein-like
Sequence

MGLNFSVLNTFGVPGLRGATTKQVYERHFANKETKEFKDFHIAYVEFCKYFNTVMPGQDF
DTPSTTVIQKFFEDEWKPEKNEEERKRKFLEFMRKKVREAKVDDSFFIAAGLAVPVAAVI
GKRASGQIPYVKSVRLDLVPNVVFVPFVTLLGIMGATAWQMGNKSAVAQEDEDANEEEKK
KETMKRAAGQQQQEEQNRSP

Transcript Sequence

Transcript ID

Zm00001d015101_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:75377186:75378281:1 gene:Zm00001d015101 gene_biotype:protein_coding transcript_biotype:protein_coding description: protein; Pentatricopeptide (PPR) repeat-containing protein-like
Sequence

GCTTCTTGTGCGCACGTCCTGATTGCCCCTGCTATTGGACCAAAGATGGGTCTTAACTTC
AGTGTACTCAACACATTCGGAGTCCCAGGGCTGAGGGGGGCGACTACCAAGCAGGTTTAT
GAGCGGCATTTCGCGAACAAGGAAACCAAGGAGTTCAAAGATTTCCACATTGCCTACGTC
GAGTTCTGCAAGTATTTCAACACGGTGATGCCCGGTCAGGATTTTGACACTCCATCTACT
ACGGTGATTCAGAAATTCTTTGAAGACGAGTGGAAGCCGGAGAAGAACGAGGAGGAGAGG
AAGAGGAAGTTCCTGGAGTTCATGAGGAAGAAGGTGAGGGAGGCCAAGGTGGACGACAGC
TTCTTCATCGCGGCGGGGCTGGCGGTGCCGGTGGCGGCCGTCATCGGCAAGAGGGCCAGC
GGGCAGATCCCCTACGTGAAGAGCGTGAGGCTGGACCTGGTCCCCAACGTCGTGTTCGTG
CCGTTCGTGACGCTGCTCGGCATCATGGGCGCCACCGCGTGGCAGATGGGCAACAAGAGC
GCTGTCGCCCAGGAGGACGAGGACGCCAACGAGGAGGAGAAGAAGAAGGAGACGATGAAG
CGCGCGGCGGGGCAGCAGCAGCAGGAGGAGCAAAACAGGTCGCCTTGATTGATGGCTTGT
TCTTCATGCATGCGTGCATGCATCGTCTCTTGGTTGATGAATGCGTGTGTACTGTATGCA
TGGATGACTCTGGATCAGTCACTCGTTTATTCACCCAATAACCATGGGATTATTATTTGT
TCATCGATGAAACATTTTATGGCGCATAAACAATAATCTCATGGATGCAAAATTG