Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d015100_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:75366378:75373321:1 gene:Zm00001d015100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-dependent protein kinase 28
Sequence

ATGGGCGCTTGCTTCTCCTCCGCCTCTGCCGCCCCCGCCGGCGCCGCCGTCGACGAGCGC
CGCCCGTCCAAGGAGGGCGACGGCAAGAAGAGGCGCCGCGCCGCCGGGGCATCGCCGGAT
GCCGCGGCGCCCGTGCGCGTGGAGTTCGGCTACGAGAGGGACTTCGAGGCGCGCTACGAG
GTCGGCCGCCTGCTCGGCCACGGCCAGTTCGGCTACACCTTCGCCGCCACCGACCGCGGC
TCTGGGGACCGCGTTGCCGTCAAGCGCATCGACAAGGCCAAGATGACCCGCCCTGTTGCT
GTGGAGGATGTGAAAAGAGAAGTGAAGATTCTTAAAGCACTTAAAGGACATCAGAATATT
GTTCACTTCTACAATGCATTTGAGGATGATTCATACGTGTACATTGTGATGGAGCTATGT
GAGGGCGGTGAACTATTAGATCGGATTTTGGCAAAAAAGAATAGCCGCTATAGTGAGAAA
GATGCTGCAGTGGTAGTCCGCCAAATGCTCAAAGTAGCTGCTGAATGCCATCTGCGTGGG
TTAGTTCACCGAGATATGAAGCCTGAGAACTTCCTTTTCAAATCGAACAAGGAGGATTCA
CCACTAAAGGCGACAGATTTTGGTTTGTCAGATTTCATTAAGCCAGGGAAGAAGTTCCAT
GACATTGTTGGAAGTGCTTACTATGTCGCACCAGAAGTACTAAAACGACGGTCTGGTCCT
GAGTCAGATGTTTGGAGCATAGGAGTCATAACCTACATTTTGCTCTGTGGGAGGCGCCCT
TTTTGGGATAAGACCGAAGACGGTATATTCAAGGAGGTTCTAAGGAACAAGCCTGATTTT
CGTAAGAGGCCTTGGTCAAGCATCAGCCCAGGTGCTAAAGATTTTGTTAAAAGGTTACTA
GTGAAGAATCCAAGGGCCAGGCTAACAGCTGCTCAAGCTCTCTCACATCCGTGGGTAAGA
GAAGGAGGGGAAGCATCCGATATCCCCGTCGACATATCTGTGTTATCAAACATGCGTCAG
TTTGTCAAGTACAGCCGTTTCAAGCAATTCGCGCTTCGGGCTCTGGCGAGCACCCTTAAC
GAGGAAGAGCTATCAGATCTGAAGGATCAGTTTGATGCAATTGATATCGATAAAAGTGGA
TCGATTAGTATCGAGGAAATGCGTCATGCCCTTGCAAAGGATCTTCCCTGGAGATTGAAG
GGTCCCCGTGTGCTGGAGATTATTCAAGCAATTGACAGCAACACTGATGGGCTCGTGGAC
TTCAAGGAGTTTGTTGCGGCAACTCTCCATATCCACCAGATGGCGGAGCTCGACTCAGAA
AGGTGGGGCATACGCTGCCAAGCTGCTTTCAGTAAGTTTGATCTTGACGGTGATGGATAT
ATCACGCCGGAGGAACTCAGAATGGTGCAGCACACTGGGTTGAAGGGATCTATCGAGCCG
CTGCTGGAGGAGGCCGACATCGACAAAGACGGCAAGATAAGCCTGTCCGAGTTCCGCAAG
CTCCTACGGACAGCGAGCATGAGCAACGTACCCAGCCCAAGGGGGCCCCCAAACCCTCAG
GCTCTGTGA

Peptide Sequence

PEP ID

Zm00001d015100_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:75366378:75373321:1 gene:Zm00001d015100 transcript:Zm00001d015100_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-dependent protein kinase 28
Sequence

MGACFSSASAAPAGAAVDERRPSKEGDGKKRRRAAGASPDAAAPVRVEFGYERDFEARYE
VGRLLGHGQFGYTFAATDRGSGDRVAVKRIDKAKMTRPVAVEDVKREVKILKALKGHQNI
VHFYNAFEDDSYVYIVMELCEGGELLDRILAKKNSRYSEKDAAVVVRQMLKVAAECHLRG
LVHRDMKPENFLFKSNKEDSPLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRRSGP
ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRKRPWSSISPGAKDFVKRLL
VKNPRARLTAAQALSHPWVREGGEASDIPVDISVLSNMRQFVKYSRFKQFALRALASTLN
EEELSDLKDQFDAIDIDKSGSISIEEMRHALAKDLPWRLKGPRVLEIIQAIDSNTDGLVD
FKEFVAATLHIHQMAELDSERWGIRCQAAFSKFDLDGDGYITPEELRMVQHTGLKGSIEP
LLEEADIDKDGKISLSEFRKLLRTASMSNVPSPRGPPNPQAL

Transcript Sequence

Transcript ID

Zm00001d015100_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:75366378:75373321:1 gene:Zm00001d015100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-dependent protein kinase 28
Sequence

AAATCCATATGCTCAGCTCCCGCCTCCTCCCATCCCCGGACCCCGGACCCCGGCCATGGG
CGCTTGCTTCTCCTCCGCCTCTGCCGCCCCCGCCGGCGCCGCCGTCGACGAGCGCCGCCC
GTCCAAGGAGGGCGACGGCAAGAAGAGGCGCCGCGCCGCCGGGGCATCGCCGGATGCCGC
GGCGCCCGTGCGCGTGGAGTTCGGCTACGAGAGGGACTTCGAGGCGCGCTACGAGGTCGG
CCGCCTGCTCGGCCACGGCCAGTTCGGCTACACCTTCGCCGCCACCGACCGCGGCTCTGG
GGACCGCGTTGCCGTCAAGCGCATCGACAAGGCCAAGATGACCCGCCCTGTTGCTGTGGA
GGATGTGAAAAGAGAAGTGAAGATTCTTAAAGCACTTAAAGGACATCAGAATATTGTTCA
CTTCTACAATGCATTTGAGGATGATTCATACGTGTACATTGTGATGGAGCTATGTGAGGG
CGGTGAACTATTAGATCGGATTTTGGCAAAAAAGAATAGCCGCTATAGTGAGAAAGATGC
TGCAGTGGTAGTCCGCCAAATGCTCAAAGTAGCTGCTGAATGCCATCTGCGTGGGTTAGT
TCACCGAGATATGAAGCCTGAGAACTTCCTTTTCAAATCGAACAAGGAGGATTCACCACT
AAAGGCGACAGATTTTGGTTTGTCAGATTTCATTAAGCCAGGGAAGAAGTTCCATGACAT
TGTTGGAAGTGCTTACTATGTCGCACCAGAAGTACTAAAACGACGGTCTGGTCCTGAGTC
AGATGTTTGGAGCATAGGAGTCATAACCTACATTTTGCTCTGTGGGAGGCGCCCTTTTTG
GGATAAGACCGAAGACGGTATATTCAAGGAGGTTCTAAGGAACAAGCCTGATTTTCGTAA
GAGGCCTTGGTCAAGCATCAGCCCAGGTGCTAAAGATTTTGTTAAAAGGTTACTAGTGAA
GAATCCAAGGGCCAGGCTAACAGCTGCTCAAGCTCTCTCACATCCGTGGGTAAGAGAAGG
AGGGGAAGCATCCGATATCCCCGTCGACATATCTGTGTTATCAAACATGCGTCAGTTTGT
CAAGTACAGCCGTTTCAAGCAATTCGCGCTTCGGGCTCTGGCGAGCACCCTTAACGAGGA
AGAGCTATCAGATCTGAAGGATCAGTTTGATGCAATTGATATCGATAAAAGTGGATCGAT
TAGTATCGAGGAAATGCGTCATGCCCTTGCAAAGGATCTTCCCTGGAGATTGAAGGGTCC
CCGTGTGCTGGAGATTATTCAAGCAATTGACAGCAACACTGATGGGCTCGTGGACTTCAA
GGAGTTTGTTGCGGCAACTCTCCATATCCACCAGATGGCGGAGCTCGACTCAGAAAGGTG
GGGCATACGCTGCCAAGCTGCTTTCAGTAAGTTTGATCTTGACGGTGATGGATATATCAC
GCCGGAGGAACTCAGAATGGTGCAGCACACTGGGTTGAAGGGATCTATCGAGCCGCTGCT
GGAGGAGGCCGACATCGACAAAGACGGCAAGATAAGCCTGTCCGAGTTCCGCAAGCTCCT
ACGGACAGCGAGCATGAGCAACGTACCCAGCCCAAGGGGGCCCCCAAACCCTCAGGCTCT
GTGAATTCCGGCTCGGCCACTAGGGAGGAGCAAGCTTAGGAAGTTGCCATACAATAGCCA
TGTGTTCTTTGGGTTCTTCAGAGTGCCATGTGATGTTTCTGGTTTTTAGCATCCAGGTTA
TGTGTGCAGTGCAGCCCCGAGTGAGTTTCGAAGTAAATATTCAGTGCTTTCTTTTTCTTT
CCGGAAGAGTGAGAGGTGGAGGTCAAAATGGTAGGCAAGACTCGCCTTCTTCTTTCCTTT
ACACTGTACAGTGATACTGAAATATGTACGATTTTTATTATAACTGTTCGTCGCAATAAA
GTTATTTGGAGAAGTGAGGA