Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015094_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:5:75259001:75273721:1 gene:Zm00001d015094 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alkaline/neutral invertase CINV2
Sequence	ATGGTACAATGTACTCAACCTCCTCCCCAGTTAAAGCTCCCAGAGAGTAAGATCACAGAA CCGACAGATGATGAGAACCAAGATTTGCCACCAAAACCTGAGAAAAGGACTAGGATGCAC CACATTGAGAGGCACAGATCTTGTGTTGTGACCTTATCTGACATAGAACTTAATGGTCTG CAACCTCGTCATCTGCACCAACCCATTGAGATCAGCCCAGGAGGATCACAGTGTTCGCTC CATGAAGAAACACCTACAGATACTAATGCATCACACAGGCATGCAATTGCAGATGCTGCT TGGGAAGCCCTCAAAAGGTCAATGGTTTACTTCAGAGGCCAACCAATTGGAACTGTTGCC GCAATAGACAAGTCTCAGGGGGCAGCACTGAACTATGACCAGGTTTTCATGAGGGATTTC ATTCCTAGCGCATTGGCTTTTCTTATGAAAGGAGAGCACTTGATTGTGAAGAACTTTCTG GTAGAAACTGCACGCCTTCAGTCAAGGGAGAAGATGGTTGACCTTTTCAAGCTTGGTCAG GGTGTGATGCCTGCAAGCTTTAAGGTGCATCATCGCAACCCTACTCAGAAGACAGAAAGC TTACTGGCTGATTTTGGTGAAACTGCCATTGGGAGGGTTGCTCCTGTAGATTCTGGCTTA TGGTGGATTATTCTCCTTCGTGCTTACACCAAATGGACAGGGGACAATTCTCTGGCTGAA AGTACTAACTGCCAAAGGGCCATGCACCTTATTCTCAGGTTGTGTCTCTCAGAGGGGTGT GATACTTCTCCAGCCTTGCTTTGTGCTGATGGATGCTCCATGATAGACCGAAGAATGGGC ATATATGGCTACCCAATTGAAATCCAGGCTCTCTTTTTCATGGCTATGAGATGCGCCCTG AGTCTGTTGAAACAAGAGTCCGATGCTGACTTCGTGAACCACATCACAAAAAGAATCCAA GCTCTGAGCTACCACTTGCACAGTTACTACTGGTTGGACTTCCAGAGACTTAATGACATA TACCGCTACAAGACCGAAGAGTACTCACAGACAGCTCTGAACAAGTTCAACGTGATGCCC GAATCGATACCTGACTGGATATTTGACTTCATGCCTAGCCGTGGTGGGTACTTCATTGGC AACGTTAGTCCCGCGAGGATGGATTTCCGCTGGTTCTGCCTAGGCAACTTCATCGCGATT CTGTCGTCGTTGGCTACCGGAGAGCAGGCTGAAGCGATACTGGATCTTGTGGAGGAGCGC TGGCAAGAACTCATCGGTGAGATGCCGCTCAAGATCTGTTACCCTGCGATGGAAAATCAG GAATGGCAGATAGTCACTGGATGCGACCCGAAGAACACCAGGTGGAGCTATCACAACGGA GGCTCGTGGCCAGTGCTGCTGTGGCTGCTGGTGGCGGTGAGCGTGAAGCTGGGGCGGCCG CACCTGGCGCGGAGAGCCGTGGAGCTGATGGAGCAGCGGCTGGCCAAGGACGACTTCCCC GAGTACTACGACGGCAAGGCCGGGCGGTACGTGGGGAAGCAGGCGCGCAAGTTCCAGACG TGGTCCGTGGCCGGCTACCTGGTGGCCAAGATGCTCCTGGACGACCCCTCTCACCTGCGA ATCGTGGCGCTGGAGGGCGACAGCCACTCCAGGGCCCCCTTCCTCAAGCGCTCCAACTCG TGCCCATGA

Peptide Sequence

PEP ID	Zm00001d015094_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:5:75259001:75273721:1 gene:Zm00001d015094 transcript:Zm00001d015094_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alkaline/neutral invertase CINV2
Sequence	MVQCTQPPPQLKLPESKITEPTDDENQDLPPKPEKRTRMHHIERHRSCVVTLSDIELNGL QPRHLHQPIEISPGGSQCSLHEETPTDTNASHRHAIADAAWEALKRSMVYFRGQPIGTVA AIDKSQGAALNYDQVFMRDFIPSALAFLMKGEHLIVKNFLVETARLQSREKMVDLFKLGQ GVMPASFKVHHRNPTQKTESLLADFGETAIGRVAPVDSGLWWIILLRAYTKWTGDNSLAE STNCQRAMHLILRLCLSEGCDTSPALLCADGCSMIDRRMGIYGYPIEIQALFFMAMRCAL SLLKQESDADFVNHITKRIQALSYHLHSYYWLDFQRLNDIYRYKTEEYSQTALNKFNVMP ESIPDWIFDFMPSRGGYFIGNVSPARMDFRWFCLGNFIAILSSLATGEQAEAILDLVEER WQELIGEMPLKICYPAMENQEWQIVTGCDPKNTRWSYHNGGSWPVLLWLLVAVSVKLGRP HLARRAVELMEQRLAKDDFPEYYDGKAGRYVGKQARKFQTWSVAGYLVAKMLLDDPSHLR IVALEGDSHSRAPFLKRSNSCP

Transcript Sequence

Transcript ID	Zm00001d015094_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:75259001:75273721:1 gene:Zm00001d015094 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alkaline/neutral invertase CINV2
Sequence	AAAAGCACTTCGAGTACTCCACACCACACCAGTCCAGCTGTCCGCCCCCGCCACTTCGAG TTCGGTTGGAGGCTTGGAGGCTTGGGCAAAACCCTCCTCGTCGTCGCGCGCTCCGCCTGC ACCACCCGCCGCCGAAGAGCTCTCTTTCAAAAACTAGCAAAGATGGTACAATGTACTCAA CCTCCTCCCCAGTTAAAGCTCCCAGAGAGTAAGATCACAGAACCGACAGATGATGAGAAC CAAGATTTGCCACCAAAACCTGAGAAAAGGACTAGGATGCACCACATTGAGAGGCACAGA TCTTGTGTTGTGACCTTATCTGACATAGAACTTAATGGTCTGCAACCTCGTCATCTGCAC CAACCCATTGAGATCAGCCCAGGAGGATCACAGTGTTCGCTCCATGAAGAAACACCTACA GATACTAATGCATCACACAGGCATGCAATTGCAGATGCTGCTTGGGAAGCCCTCAAAAGG TCAATGGTTTACTTCAGAGGCCAACCAATTGGAACTGTTGCCGCAATAGACAAGTCTCAG GGGGCAGCACTGAACTATGACCAGGTTTTCATGAGGGATTTCATTCCTAGCGCATTGGCT TTTCTTATGAAAGGAGAGCACTTGATTGTGAAGAACTTTCTGGTAGAAACTGCACGCCTT CAGTCAAGGGAGAAGATGGTTGACCTTTTCAAGCTTGGTCAGGGTGTGATGCCTGCAAGC TTTAAGGTGCATCATCGCAACCCTACTCAGAAGACAGAAAGCTTACTGGCTGATTTTGGT GAAACTGCCATTGGGAGGGTTGCTCCTGTAGATTCTGGCTTATGGTGGATTATTCTCCTT CGTGCTTACACCAAATGGACAGGGGACAATTCTCTGGCTGAAAGTACTAACTGCCAAAGG GCCATGCACCTTATTCTCAGGTTGTGTCTCTCAGAGGGGTGTGATACTTCTCCAGCCTTG CTTTGTGCTGATGGATGCTCCATGATAGACCGAAGAATGGGCATATATGGCTACCCAATT GAAATCCAGGCTCTCTTTTTCATGGCTATGAGATGCGCCCTGAGTCTGTTGAAACAAGAG TCCGATGCTGACTTCGTGAACCACATCACAAAAAGAATCCAAGCTCTGAGCTACCACTTG CACAGTTACTACTGGTTGGACTTCCAGAGACTTAATGACATATACCGCTACAAGACCGAA GAGTACTCACAGACAGCTCTGAACAAGTTCAACGTGATGCCCGAATCGATACCTGACTGG ATATTTGACTTCATGCCTAGCCGTGGTGGGTACTTCATTGGCAACGTTAGTCCCGCGAGG ATGGATTTCCGCTGGTTCTGCCTAGGCAACTTCATCGCGATTCTGTCGTCGTTGGCTACC GGAGAGCAGGCTGAAGCGATACTGGATCTTGTGGAGGAGCGCTGGCAAGAACTCATCGGT GAGATGCCGCTCAAGATCTGTTACCCTGCGATGGAAAATCAGGAATGGCAGATAGTCACT GGATGCGACCCGAAGAACACCAGGTGGAGCTATCACAACGGAGGCTCGTGGCCAGTGCTG CTGTGGCTGCTGGTGGCGGTGAGCGTGAAGCTGGGGCGGCCGCACCTGGCGCGGAGAGCC GTGGAGCTGATGGAGCAGCGGCTGGCCAAGGACGACTTCCCCGAGTACTACGACGGCAAG GCCGGGCGGTACGTGGGGAAGCAGGCGCGCAAGTTCCAGACGTGGTCCGTGGCCGGCTAC CTGGTGGCCAAGATGCTCCTGGACGACCCCTCTCACCTGCGAATCGTGGCGCTGGAGGGC GACAGCCACTCCAGGGCCCCCTTCCTCAAGCGCTCCAACTCGTGCCCATGACCCCCAGGC CCCAGCACAGCACAGGCCGCATGCATTACCTTTCCACGCACCAGTTTGCCCACACCGAGA CTACGAGAGTAAAAAGTTTCGTTTCGATGCAGTGCATTCTTCTTACTACATAAGTATGTA TAATCAAGCGGTAGTAGTGTGATGTGCTACCAAGAGGAGGATGACAGGGACAGGATACCG AGTATGTATGTACTGTCTCCATTTGCCAGATCAGATGCCACTAAACTGGTTAACATTTTG GAATGTCAGGGGCTCACGGCTAGCAATGCGTCTGGTAGCTGAGGAAATGTAAAAACTCCA TGTGCTGATATACTGTTTCTTAGACCTGACGGCATGCGGTCCTGGTGC