Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d015085_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:74828173:74830395:1 gene:Zm00001d015085 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LOW PSII ACCUMULATION 2 chloroplastic
Sequence

ATGGCGTCCCTCTCCCCCGCGCTCCTCCCCGGCGCCGGCGTGACCCTCCTCCGAGCGCCG
CCCGTGTTCCGCGTCACCGCCTCTTCCTCGAGCTCGGGGAGCAAGAAGGGCAAGAAGCCC
AAGAGCGGCAGCAAGGGCAAGGACACCAAGGCGCTGGAGCCTCCAGCGCCCGTGGTCCGC
CGCGCGCCGCCGGGAAGCGCCTCCATATTCCAGCAGCAGAAGAATGAGGCGGCGTCCAGG
GCCGGGGGCGCCGGTGGGAAGGGGCCCACGGAGGAGGAGCTACGGCAGCGGCAGGCCAAC
GAGAACGCCTTCCTCCTCGCCTGGCTTGGGCTAGGCATCATCATCCTTGTCGAGGGCATC
GCACTCGCCGCCTCCGGTTTTCTGCCAGAGGAATATGACAGCTTCTTTGTTAAGTACCTT
TATCCATCGTTCACTCCAACAGTTGTTCTGTTTTTGGCTGGTACGGTTGGCATGTTTGGA
GCAATGATGAGGGTAGAGTTAGCAAATGTGCTTGTTATGTATGAAGTAGCTTAA

Peptide Sequence

PEP ID

Zm00001d015085_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:74828173:74830395:1 gene:Zm00001d015085 transcript:Zm00001d015085_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LOW PSII ACCUMULATION 2 chloroplastic
Sequence

MASLSPALLPGAGVTLLRAPPVFRVTASSSSSGSKKGKKPKSGSKGKDTKALEPPAPVVR
RAPPGSASIFQQQKNEAASRAGGAGGKGPTEEELRQRQANENAFLLAWLGLGIIILVEGI
ALAASGFLPEEYDSFFVKYLYPSFTPTVVLFLAGTVGMFGAMMRVELANVLVMYEVA

Transcript Sequence

Transcript ID

Zm00001d015085_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:74828173:74830395:1 gene:Zm00001d015085 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LOW PSII ACCUMULATION 2 chloroplastic
Sequence

ACGCGTCCATCCCTCTCTCCGGCCCGGCCCACAAACTCACCTCGTCATCTCCCCCTCAAA
CTGTCGGATAAGCCGCGCGCCGTCGCCGTGGCCATGGCGTCCCTCTCCCCCGCGCTCCTC
CCCGGCGCCGGCGTGACCCTCCTCCGAGCGCCGCCCGTGTTCCGCGTCACCGCCTCTTCC
TCGAGCTCGGGGAGCAAGAAGGGCAAGAAGCCCAAGAGCGGCAGCAAGGGCAAGGACACC
AAGGCGCTGGAGCCTCCAGCGCCCGTGGTCCGCCGCGCGCCGCCGGGAAGCGCCTCCATA
TTCCAGCAGCAGAAGAATGAGGCGGCGTCCAGGGCCGGGGGCGCCGGTGGGAAGGGGCCC
ACGGAGGAGGAGCTACGGCAGCGGCAGGCCAACGAGAACGCCTTCCTCCTCGCCTGGCTT
GGGCTAGGCATCATCATCCTTGTCGAGGGCATCGCACTCGCCGCCTCCGGTTTTCTGCCA
GAGGAATATGACAGCTTCTTTGTTAAGTACCTTTATCCATCGTTCACTCCAACAGTTGTT
CTGTTTTTGGCTGGTACGGTTGGCATGTTTGGAGCAATGATGAGGGTAGAGTTAGCAAAT
GTGCTTGTTATGTATGAAGTAGCTTAAAGCAGCAGATATGTGCCAGAGAATAGGCTGGTG
TTTTTATTTATTTTTCCTTATATCCTGCATCCCAAATTCCTAATTATTCTTTTTTGTTTG
TTTGTAAATTAACGATCAATGGATACTTTCCTGAATATGTATTAAGTTGAGTTGTATATT
GGTTTTTGGCGATCAATTGGCTTGTTGAGACCATTTT