Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015052_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:73193832:73195700:-1 gene:Zm00001d015052 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic
Sequence	ATGGCCACGGGCGCACCGCCGGAGACGGAGCCGGCGTCGACGGCGGCGGCGCGGAAGCTG CACCACCTGCTCCGCTCCCGCGACCTCCTCCCGGCGCTCTCGTACCTCCGCACCCTCCCT TCCCCCTTCACCCTGCTCCCCAACCACGCGCTCAACGCGCTCCTCCGGGCCCTCGCCGCC GCTGGCCGCGTGCGCGCCGCCGCCTCCCTGTTCCGCGCCATCCCCGCGCCTACGCCGCAC TCCTTCAACTCCTTCCTCGCCGCGCTCTTGCGGCGGGGCCGGCGCCGCGCGGCGTCGGCG CTGCTCGCCGCTTTCCTGCGCTGCCCCGGCGCCTCCCCCGACGTGGCCACGCTCAACACC CTCATCCACGGCCTCTCCACTGCCTCGCCGCGCCCGTCTTCCCCCGCGCTCCTCAGGCTC TTCCGCTTCCTGCCGGAGGCCTACGCCTTCGCGCCCGACGCCATCACGTACAACTCCATG CTGGCTGCTCTGTGCCGAGCGGGGGACCTGGCCACCGCGCGCAGGCTGTTCGATGGAATG CGCGCGGGCGAGCAAGGCGGGGAGGCTGGCGCCTTCCCTAACGTGGTCGCCTACACCACC ATGATCAGGGCGTGCTGTGCGAGTAGGCTTGCCGATGAGGCGCTGTCGCTCTTCAAGATG ATGCTCGCGGATGGCGTGCGGCCGAACAGGATCACCTACAACACCATGGTGCAGGGCTTC TGCCAGGCCGGAAGGATGGAGCTGGTAAAGGAGGTGTTCGGGATGGACTCATTTAAGCCG GACACGTGCACGTTCAATACGCTGATGGCCGCGCACTGTAGAGAAGGGCGGATACAGGAC GCGAAGAAGGTGTTTGATCAGATGATGGAGCTCCGCGTGAGGCGCGACTCTGCGAGTTAC AGCATCGTGACCAGGGCGTTGTGCGAGAACGGTGAGTTTGGTCGAGCAGAGGAGCTTGTG GACAGCCTCTTGGAGAAGGAGGTTCTCAAGAAAAGAGGTGGTTGTGTGCCACTCATTGCA TCTTACAATCCAGTTTTTAAGTACCTCTGTGAGAATGGCAAGGCAAAGAAGGCCAGGTTG TTATTCGGGCAGCTGCTGGATATTAGGAGCAAGGTCGATTTCCTAGCATTCAAGACACTA ATCCTAGGACATTGTAAGGAGGGAGATTTTGAAGAAGGGTACGAGCTGGTGCTCTCAATG TTGAAGAGGGATCTTATGCCTGACAGTGAGTGCTATATTGCTGTAATAGATGGCTTTATG CAGAAGGGGAGGATGAAATCTGCCTGGGAGGCTCTTCACAGGATGTTAAACAGTGGTCTT CGACCTAGCACAAGTACGTTCCACTCTGTTCTTCTGGGGCTTTTGAAGAAAGATGGCTGT GCGAAAGAAGCCGCAGATTTGATAGAGATAATGCTGGAGAGGAAGATCAGGCAGAATGTT GACCTTTCTACTAATCTGATTGGTGTGTTGTTCAAAAGTGATCTTAATGACCGTGCATAC AAGATTACTAAGCATCTGTACGACAATGGATATTACATTAAGATGGAAAAACTAATCGCG ACACTTTGTGAGGACAAGAAGTTCATAGATGCCGCGGAGTTTTCTTTGTTCAGCTTGCGG AAGCGCCATGAACTGGGTGTGGCAGTTCACAGCCAGGTTCTGGATGGCCTTTGCTCGGAT CGTAGAACTTCAGAGGCATTCCAGCTTTTCTATGAGCTAAATGAGAACAAAAGGACTTCT GCGGTTGCTGCACCCCGCAGCCTAGTCTTTCTGCATCATGCTCTTGAGGAAGCTGGAATG GTGCAAGAAGCTGGTTTTGTTGCTAAACAGATGAGACGTGCAACTGCCACAACTAGGCGA AGGAGCTAA

Peptide Sequence

PEP ID	Zm00001d015052_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:73193832:73195700:-1 gene:Zm00001d015052 transcript:Zm00001d015052_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic
Sequence	MATGAPPETEPASTAAARKLHHLLRSRDLLPALSYLRTLPSPFTLLPNHALNALLRALAA AGRVRAAASLFRAIPAPTPHSFNSFLAALLRRGRRRAASALLAAFLRCPGASPDVATLNT LIHGLSTASPRPSSPALLRLFRFLPEAYAFAPDAITYNSMLAALCRAGDLATARRLFDGM RAGEQGGEAGAFPNVVAYTTMIRACCASRLADEALSLFKMMLADGVRPNRITYNTMVQGF CQAGRMELVKEVFGMDSFKPDTCTFNTLMAAHCREGRIQDAKKVFDQMMELRVRRDSASY SIVTRALCENGEFGRAEELVDSLLEKEVLKKRGGCVPLIASYNPVFKYLCENGKAKKARL LFGQLLDIRSKVDFLAFKTLILGHCKEGDFEEGYELVLSMLKRDLMPDSECYIAVIDGFM QKGRMKSAWEALHRMLNSGLRPSTSTFHSVLLGLLKKDGCAKEAADLIEIMLERKIRQNV DLSTNLIGVLFKSDLNDRAYKITKHLYDNGYYIKMEKLIATLCEDKKFIDAAEFSLFSLR KRHELGVAVHSQVLDGLCSDRRTSEAFQLFYELNENKRTSAVAAPRSLVFLHHALEEAGM VQEAGFVAKQMRRATATTRRRS

Transcript Sequence

Transcript ID	Zm00001d015052_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:73193832:73195700:-1 gene:Zm00001d015052 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic
Sequence	ATGGCCACGGGCGCACCGCCGGAGACGGAGCCGGCGTCGACGGCGGCGGCGCGGAAGCTG CACCACCTGCTCCGCTCCCGCGACCTCCTCCCGGCGCTCTCGTACCTCCGCACCCTCCCT TCCCCCTTCACCCTGCTCCCCAACCACGCGCTCAACGCGCTCCTCCGGGCCCTCGCCGCC GCTGGCCGCGTGCGCGCCGCCGCCTCCCTGTTCCGCGCCATCCCCGCGCCTACGCCGCAC TCCTTCAACTCCTTCCTCGCCGCGCTCTTGCGGCGGGGCCGGCGCCGCGCGGCGTCGGCG CTGCTCGCCGCTTTCCTGCGCTGCCCCGGCGCCTCCCCCGACGTGGCCACGCTCAACACC CTCATCCACGGCCTCTCCACTGCCTCGCCGCGCCCGTCTTCCCCCGCGCTCCTCAGGCTC TTCCGCTTCCTGCCGGAGGCCTACGCCTTCGCGCCCGACGCCATCACGTACAACTCCATG CTGGCTGCTCTGTGCCGAGCGGGGGACCTGGCCACCGCGCGCAGGCTGTTCGATGGAATG CGCGCGGGCGAGCAAGGCGGGGAGGCTGGCGCCTTCCCTAACGTGGTCGCCTACACCACC ATGATCAGGGCGTGCTGTGCGAGTAGGCTTGCCGATGAGGCGCTGTCGCTCTTCAAGATG ATGCTCGCGGATGGCGTGCGGCCGAACAGGATCACCTACAACACCATGGTGCAGGGCTTC TGCCAGGCCGGAAGGATGGAGCTGGTAAAGGAGGTGTTCGGGATGGACTCATTTAAGCCG GACACGTGCACGTTCAATACGCTGATGGCCGCGCACTGTAGAGAAGGGCGGATACAGGAC GCGAAGAAGGTGTTTGATCAGATGATGGAGCTCCGCGTGAGGCGCGACTCTGCGAGTTAC AGCATCGTGACCAGGGCGTTGTGCGAGAACGGTGAGTTTGGTCGAGCAGAGGAGCTTGTG GACAGCCTCTTGGAGAAGGAGGTTCTCAAGAAAAGAGGTGGTTGTGTGCCACTCATTGCA TCTTACAATCCAGTTTTTAAGTACCTCTGTGAGAATGGCAAGGCAAAGAAGGCCAGGTTG TTATTCGGGCAGCTGCTGGATATTAGGAGCAAGGTCGATTTCCTAGCATTCAAGACACTA ATCCTAGGACATTGTAAGGAGGGAGATTTTGAAGAAGGGTACGAGCTGGTGCTCTCAATG TTGAAGAGGGATCTTATGCCTGACAGTGAGTGCTATATTGCTGTAATAGATGGCTTTATG CAGAAGGGGAGGATGAAATCTGCCTGGGAGGCTCTTCACAGGATGTTAAACAGTGGTCTT CGACCTAGCACAAGTACGTTCCACTCTGTTCTTCTGGGGCTTTTGAAGAAAGATGGCTGT GCGAAAGAAGCCGCAGATTTGATAGAGATAATGCTGGAGAGGAAGATCAGGCAGAATGTT GACCTTTCTACTAATCTGATTGGTGTGTTGTTCAAAAGTGATCTTAATGACCGTGCATAC AAGATTACTAAGCATCTGTACGACAATGGATATTACATTAAGATGGAAAAACTAATCGCG ACACTTTGTGAGGACAAGAAGTTCATAGATGCCGCGGAGTTTTCTTTGTTCAGCTTGCGG AAGCGCCATGAACTGGGTGTGGCAGTTCACAGCCAGGTTCTGGATGGCCTTTGCTCGGAT CGTAGAACTTCAGAGGCATTCCAGCTTTTCTATGAGCTAAATGAGAACAAAAGGACTTCT GCGGTTGCTGCACCCCGCAGCCTAGTCTTTCTGCATCATGCTCTTGAGGAAGCTGGAATG GTGCAAGAAGCTGGTTTTGTTGCTAAACAGATGAGACGTGCAACTGCCACAACTAGGCGA AGGAGCTAA