Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015037_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:5:72934800:72939876:-1 gene:Zm00001d015037 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glutamate--tRNA ligase chloroplastic/mitochondrial
Sequence	ATGGCGGCGAGCGCACTGCTGACGGGGTCGCCGTGGCTGCGCATGCGCCTCCTACCGGAC GCGCCCGCGCGCCCCTTCCGCCACCTCCACCTCCGCCGGAGCTTCTCCGTCCGCGCCTCC GGCGCCGACGGCAGCCCCGCCCCCGTCCGCGTCCGCTTCGCGCCGTCGCCCACCGGCAAC CTCCACGTCGGCGGCGCCCGCACCGCGCTCTTCAACTACCTCTTCGCGCGCTCCAAGGGG GGCCGCTTCGTGCTCCGCGTCGAGGACACCGACCTCGAGCGCTCCACCAGGAAGTCCGAG GAGGCCGTCCTCGCCGACCTCGCCTGGCTCGGTCTAGACTGGGACGAAGGTCCCGATGTC GGTGGGGATTTTGGGCCTTATCGCCAGTCAGAGCGGAACTCACTGTACAAACAGTATGCT GAGAAGCTTTTGGACTCTGGTGCGGTTTACCGCTGCTTTTGCTCCAGCGAGGAACTCGAG CAAATGAAGGAAGTCGCAAAGCAGAGACAACTTCCTCCTGTGTATATGGGGAAGTGGGCA AGTGCTTCAGATGCAGAAGTACAACAGGAGTTAGAGAAAGGGACACCTTACACTTACCGC TTCCGTGTGCCAAAGGAAGGGTCTTTGAAAATTAGTGACTTAATTCGTGGTGAGGTCAGT TGGAACTTAGACACGCTTGGTGATTTCGTGATTATGAGAAGCAATGGACAGCCTGTGTAT AACTTTTGTGTGACAGTTGACGACGCTACCATGCAAATATCTCATGTTATCAGAGCTGAA GAGCATCTACCAAACACATTGCGACAGGCTTTAATTTACAAAGCTCTTGGATTCGCAATG CCTTCATTTGCTCATGTTTCGCTTATTCTGGCTCCTGACAGGAGTAAACTGTCTAAACGG CATGGAGCTACTTCTGTCGGGCAGTATAAAAATATGGGCTATCTACCTCAGGCAATGGTC AATTATTTAGCACTACTGGGCTGGGGTGATGGCACTGAGAATGAGTTCTTCACTATTGAT GACCTAGTCCAGAAATTCACTATAAACCGTGTCAATAAAAGTGGAGCAGTCTTTGATGCA ACAAAATTGAAATGGATGAACGGACAACATCTAAGATCATTTCCCCATGATGAACTCATC AAAGCTTTTGAAGATCGGTGGACGGACACAGGCATTCTCCAGGAATCTGAAAGTGGTTTT GCTAAGGAAGCTGCCGAGCTTTTGAAGGATGGTATCGATTTGATAACAGATGCGGACGCA GCTCTTACGAATCTGTTGTCATATCCCCTTCATACTACTCTAAGCAGCGAGGAAGCTAAA CCTGTGGTGCAAGACAAGATCTCCGAGGTTGCTTGGAGTCTTATTTCCGCGTACGACAGC GGCGAACTCGGCCAAGCGCTAGCTGAGGGCCGTGATGGCTGGCAGAAGTGGGTTAAAGGT TTCGGCAAGTCTATCAAAAGAAAGGGCAAGGGGCTCTTCATGCCGCTCCGGGTACTGCTG ACCGGGAAGCTTCATGGGCCTGACATGGGTGGCAGCATCGCCCTAATACACAAGGCCGGC GTCTGCTGCGCTGTGACTCCGCAGTCCAACTTCGTGACTCTAGACGAGCGGTTCAGGATG CTCAAGGACGTCGACTGGGAGTCGCTGGCGAAGGAGCAGGAAACCCCTGCTGTCCCTGCC GCCGCTTCCTAG

Peptide Sequence

PEP ID	Zm00001d015037_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:5:72934800:72939876:-1 gene:Zm00001d015037 transcript:Zm00001d015037_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glutamate--tRNA ligase chloroplastic/mitochondrial
Sequence	MAASALLTGSPWLRMRLLPDAPARPFRHLHLRRSFSVRASGADGSPAPVRVRFAPSPTGN LHVGGARTALFNYLFARSKGGRFVLRVEDTDLERSTRKSEEAVLADLAWLGLDWDEGPDV GGDFGPYRQSERNSLYKQYAEKLLDSGAVYRCFCSSEELEQMKEVAKQRQLPPVYMGKWA SASDAEVQQELEKGTPYTYRFRVPKEGSLKISDLIRGEVSWNLDTLGDFVIMRSNGQPVY NFCVTVDDATMQISHVIRAEEHLPNTLRQALIYKALGFAMPSFAHVSLILAPDRSKLSKR HGATSVGQYKNMGYLPQAMVNYLALLGWGDGTENEFFTIDDLVQKFTINRVNKSGAVFDA TKLKWMNGQHLRSFPHDELIKAFEDRWTDTGILQESESGFAKEAAELLKDGIDLITDADA ALTNLLSYPLHTTLSSEEAKPVVQDKISEVAWSLISAYDSGELGQALAEGRDGWQKWVKG FGKSIKRKGKGLFMPLRVLLTGKLHGPDMGGSIALIHKAGVCCAVTPQSNFVTLDERFRM LKDVDWESLAKEQETPAVPAAAS

Transcript Sequence

Transcript ID	Zm00001d015037_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:72934800:72939876:-1 gene:Zm00001d015037 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glutamate--tRNA ligase chloroplastic/mitochondrial
Sequence	CGCGAATGTACACCTTTAACCATATCCTACCTTCTGCCATGTGAGCCCTTTGTGTCAGTA GCTTGGCTATCCCGCTCGCCGTCTCGTTTGGGCCCCCAACACCCCCCACCCCACCGTCTG ACCGTCCTATAGACTATAGTCCTATGATCCTATCCATCATCCTCTCCCATTTCGTCGCAA TCCTCAAAAAGGGAAGACATGGCGGCGAGCGCACTGCTGACGGGGTCGCCGTGGCTGCGC ATGCGCCTCCTACCGGACGCGCCCGCGCGCCCCTTCCGCCACCTCCACCTCCGCCGGAGC TTCTCCGTCCGCGCCTCCGGCGCCGACGGCAGCCCCGCCCCCGTCCGCGTCCGCTTCGCG CCGTCGCCCACCGGCAACCTCCACGTCGGCGGCGCCCGCACCGCGCTCTTCAACTACCTC TTCGCGCGCTCCAAGGGGGGCCGCTTCGTGCTCCGCGTCGAGGACACCGACCTCGAGCGC TCCACCAGGAAGTCCGAGGAGGCCGTCCTCGCCGACCTCGCCTGGCTCGGTCTAGACTGG GACGAAGGTCCCGATGTCGGTGGGGATTTTGGGCCTTATCGCCAGTCAGAGCGGAACTCA CTGTACAAACAGTATGCTGAGAAGCTTTTGGACTCTGGTGCGGTTTACCGCTGCTTTTGC TCCAGCGAGGAACTCGAGCAAATGAAGGAAGTCGCAAAGCAGAGACAACTTCCTCCTGTG TATATGGGGAAGTGGGCAAGTGCTTCAGATGCAGAAGTACAACAGGAGTTAGAGAAAGGG ACACCTTACACTTACCGCTTCCGTGTGCCAAAGGAAGGGTCTTTGAAAATTAGTGACTTA ATTCGTGGTGAGGTCAGTTGGAACTTAGACACGCTTGGTGATTTCGTGATTATGAGAAGC AATGGACAGCCTGTGTATAACTTTTGTGTGACAGTTGACGACGCTACCATGCAAATATCT CATGTTATCAGAGCTGAAGAGCATCTACCAAACACATTGCGACAGGCTTTAATTTACAAA GCTCTTGGATTCGCAATGCCTTCATTTGCTCATGTTTCGCTTATTCTGGCTCCTGACAGG AGTAAACTGTCTAAACGGCATGGAGCTACTTCTGTCGGGCAGTATAAAAATATGGGCTAT CTACCTCAGGCAATGGTCAATTATTTAGCACTACTGGGCTGGGGTGATGGCACTGAGAAT GAGTTCTTCACTATTGATGACCTAGTCCAGAAATTCACTATAAACCGTGTCAATAAAAGT GGAGCAGTCTTTGATGCAACAAAATTGAAATGGATGAACGGACAACATCTAAGATCATTT CCCCATGATGAACTCATCAAAGCTTTTGAAGATCGGTGGACGGACACAGGCATTCTCCAG GAATCTGAAAGTGGTTTTGCTAAGGAAGCTGCCGAGCTTTTGAAGGATGGTATCGATTTG ATAACAGATGCGGACGCAGCTCTTACGAATCTGTTGTCATATCCCCTTCATACTACTCTA AGCAGCGAGGAAGCTAAACCTGTGGTGCAAGACAAGATCTCCGAGGTTGCTTGGAGTCTT ATTTCCGCGTACGACAGCGGCGAACTCGGCCAAGCGCTAGCTGAGGGCCGTGATGGCTGG CAGAAGTGGGTTAAAGGTTTCGGCAAGTCTATCAAAAGAAAGGGCAAGGGGCTCTTCATG CCGCTCCGGGTACTGCTGACCGGGAAGCTTCATGGGCCTGACATGGGTGGCAGCATCGCC CTAATACACAAGGCCGGCGTCTGCTGCGCTGTGACTCCGCAGTCCAACTTCGTGACTCTA GACGAGCGGTTCAGGATGCTCAAGGACGTCGACTGGGAGTCGCTGGCGAAGGAGCAGGAA ACCCCTGCTGTCCCTGCCGCCGCTTCCTAGACTGCCAGGAGGAGGACGACGTTGCGCGCA ATGTCGCTCTTGAGTTTTTTTTTAAAAAAAAAATCCATTTTGGCGTGTTTTTGTCACCGT TCGTTTCCATGGAGTAGGAGAGGAGCTCAGTGGTTTGGTCATAGGTCGTTGGTGCTGTAA TGTGGGCAATAATATTGAATTATTATTATTAGATGATGATGATGATGCCTGTAATCTGCG TGTCTACAGCTTCTCGTTTGCTGAATACTTCATCTTTTTTTTTGACAAGTGAATACACGA TTATTACAGGTGTTCATACGC