Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015030_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:72784523:72786344:-1 gene:Zm00001d015030 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pentatricopeptide repeat smr4 description: pentatricopeptide repeat smr4
Sequence	ATGCCAGCGGTGGCGTCCCTTTGGGCGCCGCCCGCGGCTGCCCGGCGGCGGAGGTTCTCC CCCGTGGTCTCGTCCTCGCTGCGCCGGGTCGCGTCGGGCGGCGGGTCTAGCTGGCGGAGC GAGCGGCGGCTCATGTCGGAGCTGGAGCGCACAGTGACAGCGGGCGCGACCGAGCGCGTC ATCCGCAGCTACGTCGGCACCAAGTCGGAGCGCGCCGCGCTCGCCGCGCTCTCCAGGCTA CTCATGGACTCCGACCCCCTCGCCATCCCGTTCTACGAGGCGGTCACACAGGCACGGTGG TTCAAATGGAGCTCGATCCACGCAGCTGCAGTCGCCGCCTTGCTCGAAGCCAACGGACGC GCCGGAGAATCCAGGTCCCTGATCGCCGACTCCGTCTCGCAGCACCTCCAGCAGTCGACC GACGAGGTAGCCCTCTTCTACTGCGACCTCATAGCGGCGTTCTCCTCGCGCGGGCTCAAG GACCGGGCGACGGAGTTCCACATGGAGCTACGGTCCATGCCGCCGCTCTCCGGGCGCAAG GCCTACGCGGCGATGGTCAAGTCCCTGTGCCTGCTGGGCATGCCGGCCGAGGCCGAGGCA GCGCTCAGGGAGATGGTCTCGCGAGGGCACCGGCCCGAGGCGGCCCAGTTCGGGGCCGTC GCGAGGTGCTACGGCAGGGCCGGCTCACCGGCCGACATGGAGCGGGTCATCGCGTCCATG GCGGACGCCGGCGGCATCCGCCTCGGCGCCGGCGCGGCGGATGCCGTGCTGTCGTGCTAC AGCGCCTGCCGCGACCACGCCAGGACTCTGGCGTGGCTGAAGAGGATGCGGAAGCTGCGC GTCGCGGTGACCGCGAAAGGCTACAACTTGGTGCTCAACTCGTGTCCGTCGCTCGCTTCG GTGGTGCGGGAGCTGGGCCCTGAGCTTCCGCTGTCGACGGCCGGGCTGGTCGGGTGGCTC AGGTCTGCGTCGACAACACCGGCACCGGCAGCGGAAGTGGAGGTGGTGCGGGAGCTCCTG GCGTCGTCGGCGTCGGTTCTGGACAGGGCGATGGAGTGGTCGGAGGCCGAGGCGAAGCTG AACCTGCACGGGTTCAGCACGGTTGCAGCCTACGTGCTGGTGCTGCAGTGGGTGGACGCG GTGAGGGGCCGCGCCCGCGCGTTGCCGTTGGAGGTGTCGGTGGTGTGCGGCGTTGGGAAG CACAGTGACGTCCGAGGCGAGTCCAGAGTGCGGGAGCTGGCGCAGGAGGTGCTGGGACGG ATGGGGAGTCCCCTGAAGCTGTCGGCGAGAAACAGAGGGCGGCTCGTGGCGAAGCGAGAC CGGGTGGAGCAGTGGCTGGCCAGCTTGCCGGTGCCTGAGGACGGCACAGACCCATCGCCT GATGCAGCAAACGAAGAACCATTTGTATTTGCACTTTTCAGAAAACTTGGGCAGTTTTTT TCCAACCTTATGTAG

Peptide Sequence

PEP ID	Zm00001d015030_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:72784523:72786344:-1 gene:Zm00001d015030 transcript:Zm00001d015030_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pentatricopeptide repeat smr4 description: pentatricopeptide repeat smr4
Sequence	MPAVASLWAPPAAARRRRFSPVVSSSLRRVASGGGSSWRSERRLMSELERTVTAGATERV IRSYVGTKSERAALAALSRLLMDSDPLAIPFYEAVTQARWFKWSSIHAAAVAALLEANGR AGESRSLIADSVSQHLQQSTDEVALFYCDLIAAFSSRGLKDRATEFHMELRSMPPLSGRK AYAAMVKSLCLLGMPAEAEAALREMVSRGHRPEAAQFGAVARCYGRAGSPADMERVIASM ADAGGIRLGAGAADAVLSCYSACRDHARTLAWLKRMRKLRVAVTAKGYNLVLNSCPSLAS VVRELGPELPLSTAGLVGWLRSASTTPAPAAEVEVVRELLASSASVLDRAMEWSEAEAKL NLHGFSTVAAYVLVLQWVDAVRGRARALPLEVSVVCGVGKHSDVRGESRVRELAQEVLGR MGSPLKLSARNRGRLVAKRDRVEQWLASLPVPEDGTDPSPDAANEEPFVFALFRKLGQFF SNLM

Transcript Sequence

Transcript ID	Zm00001d015030_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:72784523:72786344:-1 gene:Zm00001d015030 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pentatricopeptide repeat smr4 description: pentatricopeptide repeat smr4
Sequence	CGGTCTCACCTCATCCACATCTACCAGGCATCAGCTCGAAAGCTCAGCACATCACAGGCC AGCCCAAGCAGCGATGCCAGCGGTGGCGTCCCTTTGGGCGCCGCCCGCGGCTGCCCGGCG GCGGAGGTTCTCCCCCGTGGTCTCGTCCTCGCTGCGCCGGGTCGCGTCGGGCGGCGGGTC TAGCTGGCGGAGCGAGCGGCGGCTCATGTCGGAGCTGGAGCGCACAGTGACAGCGGGCGC GACCGAGCGCGTCATCCGCAGCTACGTCGGCACCAAGTCGGAGCGCGCCGCGCTCGCCGC GCTCTCCAGGCTACTCATGGACTCCGACCCCCTCGCCATCCCGTTCTACGAGGCGGTCAC ACAGGCACGGTGGTTCAAATGGAGCTCGATCCACGCAGCTGCAGTCGCCGCCTTGCTCGA AGCCAACGGACGCGCCGGAGAATCCAGGTCCCTGATCGCCGACTCCGTCTCGCAGCACCT CCAGCAGTCGACCGACGAGGTAGCCCTCTTCTACTGCGACCTCATAGCGGCGTTCTCCTC GCGCGGGCTCAAGGACCGGGCGACGGAGTTCCACATGGAGCTACGGTCCATGCCGCCGCT CTCCGGGCGCAAGGCCTACGCGGCGATGGTCAAGTCCCTGTGCCTGCTGGGCATGCCGGC CGAGGCCGAGGCAGCGCTCAGGGAGATGGTCTCGCGAGGGCACCGGCCCGAGGCGGCCCA GTTCGGGGCCGTCGCGAGGTGCTACGGCAGGGCCGGCTCACCGGCCGACATGGAGCGGGT CATCGCGTCCATGGCGGACGCCGGCGGCATCCGCCTCGGCGCCGGCGCGGCGGATGCCGT GCTGTCGTGCTACAGCGCCTGCCGCGACCACGCCAGGACTCTGGCGTGGCTGAAGAGGAT GCGGAAGCTGCGCGTCGCGGTGACCGCGAAAGGCTACAACTTGGTGCTCAACTCGTGTCC GTCGCTCGCTTCGGTGGTGCGGGAGCTGGGCCCTGAGCTTCCGCTGTCGACGGCCGGGCT GGTCGGGTGGCTCAGGTCTGCGTCGACAACACCGGCACCGGCAGCGGAAGTGGAGGTGGT GCGGGAGCTCCTGGCGTCGTCGGCGTCGGTTCTGGACAGGGCGATGGAGTGGTCGGAGGC CGAGGCGAAGCTGAACCTGCACGGGTTCAGCACGGTTGCAGCCTACGTGCTGGTGCTGCA GTGGGTGGACGCGGTGAGGGGCCGCGCCCGCGCGTTGCCGTTGGAGGTGTCGGTGGTGTG CGGCGTTGGGAAGCACAGTGACGTCCGAGGCGAGTCCAGAGTGCGGGAGCTGGCGCAGGA GGTGCTGGGACGGATGGGGAGTCCCCTGAAGCTGTCGGCGAGAAACAGAGGGCGGCTCGT GGCGAAGCGAGACCGGGTGGAGCAGTGGCTGGCCAGCTTGCCGGTGCCTGAGGACGGCAC AGACCCATCGCCTGATGCAGCAAACGAAGAACCATTTGTATTTGCACTTTTCAGAAAACT TGGGCAGTTTTTTTCCAACCTTATGTAGATAGATGTTGCTGCCCCCATCACACCAGCATC GATCGAAAGAGCTGGCCTGGTGAATGAATCTGTCTCGAACGAACTGACTGATGGCCTAGT GTGTTTGCTTGGCTTTGGCGCCGTATGCAAATCTGGTGAATGAAGCAGGCAGCGCATTTG CCTGCCTTTGGCACAGGATAGC