Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014988_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:71247670:71250750:1 gene:Zm00001d014988 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGCGTGGCCACCTCTCGCCCCCGCGGCGGCCACTCCGGCCTGTGCCTTGGCGTGG
GGAGCAGCAGCAACGGCGCAGCGGAAGGCCGTGGAGCAGGAGTCAGCGGCGCAGGCGGTG
AGCCGCATCGTGGCGAGCTGCGCCAACTCCAGCGGCGTGGCAGTCGCCGTGGTGGACGCC
AACGCCGTCATCTCCGGCGGCTCCGCTCTCTCCACTTCCGCGGGGCGCCTTGTCACCGTG
CCCGAGGTGCTCGAGGAGGTCCGGGACGCAACCGCGCGGCGGCGCCTCGGGCTCCTCCCC
GTTCCCGTTGAGACCGTTGAACCTGCGCCGGAGTTCGTTAAGAAAGTTACCAAGTTTGCC
AGGGAGACAGGAGACATCCAAACGCTTTCAGATGTTGATATAAAGATTATTGCTTTGGCT
TACATGTTAGAAGCTGAGATCCATGGGACTAGCCATTTGCGAGAGCACCCTCCTCCTCTG
CATGAGGTGAATGTCAGAAAGCTGTCAGAAGCTCAAATGCCTGGTTGGGGCTCTAATGTG
CCTAACCTGAAAGAGTGGGAAGAGTTGGATCAGATGTCTGAAGCTGGTGGAGATATCAAT
TCTCGAATACTTCCTCTGAAGGATATTGAGAGTCAAGATATCCTGATGTGTGATACCAAC
AGTCTCTGTGGGGCACAAGAGGATACAGAGCTCCAGCCATCAAAGAAGGATGCACCTGTT
GCATGGGAGGACGATGAGAACAATGTAGGTTGGATGCCTGCTGTTAGCCGCAGCATGCAC
AGAAGATATTTGCAGAGGAAGGCAAGGCGTGATGCCCTCAAGGAATCTGGACAAAGTTTT
GAGACAAGTTCTGTTGTTCCATCAATCGATGATGATAAAGTTCTCTCTGAAAATAGTGGA
TTGGAGCATGGTCTGACTTCAACTGATGGCCTTTCTTCTGTCACTGAGATAATCAGTGCA
CGTTCTGATGATTTTGAACATCAAGCAGAAAATGACACTGAAATTGCTGGAGAACATTTG
CATTCTGATCAGCGAGCTTACGGTGATGATGCTGATGCGTGCACCAAAGAACTGGAAAAC
CTAGATATAGAAGGTGAGGATGAGGGAGGTGGTGATGCACATTTCATTGTTGATGAGAGC
AGCGAGCAGAGTTGGACCCTGAGGTCCTTATCCGAATCAACTGTAGCATGTGTTACTAGT
GATTATGCCATGCAAAATGTCATCCTGCTGATTGGTCTCCGTCTCATAGCACCAGGTGGC
ATGCAGATACGCCAGATGCATAGGTGGGTTTTGAGGTGCCATGCTTGCTATAAGGTGACC
CAAGAGGTTGGCAAAATATTTTGTCCGAAGTGTGGTAATGGTGGGACCTTACGGAAGGTT
TCGGTAACAGTTGGTGAAAATGGGATCACTATGGCTTCACGGCGCCCACGTGTTACACTT
CGAGGCACAAAATTCTCCCTCCCAATGCCCCAAGGTGGAAGAGATGCAATAACTAAGAAC
CCCATCCTTCGTGAGGATCAACTTCCTCAGAAGGTTCTTCATCCTAAACTGAAGAAGTCA
AACAAGGATGATGATTTCTTGGGCGTGGTCGACATATTTTCGCATGGTGGTGATAAGAAG
GCACCATTGAAACCTCCAGTGAGGAAGGCGCTCGCAATGTTCAGCGGGAAAAGAAATCCA
AACGACAACCACTTCTCTCGCAAGAAGTACTAA

Peptide Sequence

PEP ID

Zm00001d014988_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:71247670:71250750:1 gene:Zm00001d014988 transcript:Zm00001d014988_T001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEAWPPLAPAAATPACALAWGAAATAQRKAVEQESAAQAVSRIVASCANSSGVAVAVVDA
NAVISGGSALSTSAGRLVTVPEVLEEVRDATARRRLGLLPVPVETVEPAPEFVKKVTKFA
RETGDIQTLSDVDIKIIALAYMLEAEIHGTSHLREHPPPLHEVNVRKLSEAQMPGWGSNV
PNLKEWEELDQMSEAGGDINSRILPLKDIESQDILMCDTNSLCGAQEDTELQPSKKDAPV
AWEDDENNVGWMPAVSRSMHRRYLQRKARRDALKESGQSFETSSVVPSIDDDKVLSENSG
LEHGLTSTDGLSSVTEIISARSDDFEHQAENDTEIAGEHLHSDQRAYGDDADACTKELEN
LDIEGEDEGGGDAHFIVDESSEQSWTLRSLSESTVACVTSDYAMQNVILLIGLRLIAPGG
MQIRQMHRWVLRCHACYKVTQEVGKIFCPKCGNGGTLRKVSVTVGENGITMASRRPRVTL
RGTKFSLPMPQGGRDAITKNPILREDQLPQKVLHPKLKKSNKDDDFLGVVDIFSHGGDKK
APLKPPVRKALAMFSGKRNPNDNHFSRKKY

Transcript Sequence

Transcript ID

Zm00001d014988_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:71247670:71250750:1 gene:Zm00001d014988 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAAGTGAGCCCCAAACCCTACACCCTCATGGAAGCGTGGCCACCTCTCGCCCCCGCGGC
GGCCACTCCGGCCTGTGCCTTGGCGTGGGGAGCAGCAGCAACGGCGCAGCGGAAGGCCGT
GGAGCAGGAGTCAGCGGCGCAGGCGGTGAGCCGCATCGTGGCGAGCTGCGCCAACTCCAG
CGGCGTGGCAGTCGCCGTGGTGGACGCCAACGCCGTCATCTCCGGCGGCTCCGCTCTCTC
CACTTCCGCGGGGCGCCTTGTCACCGTGCCCGAGGTGCTCGAGGAGGTCCGGGACGCAAC
CGCGCGGCGGCGCCTCGGGCTCCTCCCCGTTCCCGTTGAGACCGTTGAACCTGCGCCGGA
GTTCGTTAAGAAAGTTACCAAGTTTGCCAGGGAGACAGGAGACATCCAAACGCTTTCAGA
TGTTGATATAAAGATTATTGCTTTGGCTTACATGTTAGAAGCTGAGATCCATGGGACTAG
CCATTTGCGAGAGCACCCTCCTCCTCTGCATGAGGTGAATGTCAGAAAGCTGTCAGAAGC
TCAAATGCCTGGTTGGGGCTCTAATGTGCCTAACCTGAAAGAGTGGGAAGAGTTGGATCA
GATGTCTGAAGCTGGTGGAGATATCAATTCTCGAATACTTCCTCTGAAGGATATTGAGAG
TCAAGATATCCTGATGTGTGATACCAACAGTCTCTGTGGGGCACAAGAGGATACAGAGCT
CCAGCCATCAAAGAAGGATGCACCTGTTGCATGGGAGGACGATGAGAACAATGTAGGTTG
GATGCCTGCTGTTAGCCGCAGCATGCACAGAAGATATTTGCAGAGGAAGGCAAGGCGTGA
TGCCCTCAAGGAATCTGGACAAAGTTTTGAGACAAGTTCTGTTGTTCCATCAATCGATGA
TGATAAAGTTCTCTCTGAAAATAGTGGATTGGAGCATGGTCTGACTTCAACTGATGGCCT
TTCTTCTGTCACTGAGATAATCAGTGCACGTTCTGATGATTTTGAACATCAAGCAGAAAA
TGACACTGAAATTGCTGGAGAACATTTGCATTCTGATCAGCGAGCTTACGGTGATGATGC
TGATGCGTGCACCAAAGAACTGGAAAACCTAGATATAGAAGGTGAGGATGAGGGAGGTGG
TGATGCACATTTCATTGTTGATGAGAGCAGCGAGCAGAGTTGGACCCTGAGGTCCTTATC
CGAATCAACTGTAGCATGTGTTACTAGTGATTATGCCATGCAAAATGTCATCCTGCTGAT
TGGTCTCCGTCTCATAGCACCAGGTGGCATGCAGATACGCCAGATGCATAGGTGGGTTTT
GAGGTGCCATGCTTGCTATAAGGTGACCCAAGAGGTTGGCAAAATATTTTGTCCGAAGTG
TGGTAATGGTGGGACCTTACGGAAGGTTTCGGTAACAGTTGGTGAAAATGGGATCACTAT
GGCTTCACGGCGCCCACGTGTTACACTTCGAGGCACAAAATTCTCCCTCCCAATGCCCCA
AGGTGGAAGAGATGCAATAACTAAGAACCCCATCCTTCGTGAGGATCAACTTCCTCAGAA
GGTTCTTCATCCTAAACTGAAGAAGTCAAACAAGGATGATGATTTCTTGGGCGTGGTCGA
CATATTTTCGCATGGTGGTGATAAGAAGGCACCATTGAAACCTCCAGTGAGGAAGGCGCT
CGCAATGTTCAGCGGGAAAAGAAATCCAAACGACAACCACTTCTCTCGCAAGAAGTACTA
AGCTCTGATCTGTCGTCTTCTTTTTATGCACGCCTGTGGTACCGTAGTCTGTAATCCCAG
CATGTACGTAATGGTTGAAGCAGAGTGCCTTTTTTTTTGTTAGTGGCGTATACTCATCAT
ATTCATATACACAGATATATATAAGCATGTAAGCTATGCAGTTTTGCAGCAACTTTGTAT
GGTTTCCGTGCTACTGTTTTTCTAATGCATTTGAATTTTGAGTTTGAATGTCCACAGTGA
TTTGGAGCGTACTGCGTAATCGAGCTGCAATGAACCGTAGTGATTTCCAT