Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d014966_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:70373947:70376193:-1 gene:Zm00001d014966 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGCGCGCCGCCACCTCGCCTACCCCCTGCGCCTCTCGATCCTCTCCCGCAATCCCGGA GCCCCTGCCCGCTCGCTATGCGCCTCATCGTCCACCCACGAGGTCCCAGTCCCGGCCGTC GAGGCCCAGGCGGAGGCGGAAGCGGCGGCGAAGGCTGCTGCGTCCCCCTCTCCGTCGGCG CCCGCCAACCCGCCCCGGCGCGAGGAGCCTCTCCACGAGACGGTGCTGCACATGATCCGG CGGCGGCCGTGGACGACGCGCCTGGAGAACTCGATCCGCCTGCTCTCGCCCACCCTCGAC GCGCCGCTGGTCCACGGCGTCATCTCCGGGGCCGCATCCGCGGGGCGCGCCGACCTCGCG CTCCAGTTCTTCCGCTTCGCATACCGCCGGGGCGGGTTCAGCCCGGAGGGCGCCACGTTC GCGCTCCTCGTGCCCGCGCTCGCGTCGCGCCGCATGCTCAACCACGCGCGCTGCCTCGTC CTCGACACCATGCCGTCCTTCTCCGTCGCGCCCGACGAGCCCACGCTCGCCGCGCTCATC TCCGCCTACGGCAGGGCCGCCATCCCGCAGGAGGCCGTTAAGCTGTTCCGGATGATGCCC AACATAGGCGTCCCCCGCACGGCGCTCTCCTACAACGCCGTACTCAAGGCCATACTCTGC CGCGGACGCGAGGCCATGGCCAGGCGGATCTACAACGCCATGATCGCGGACGGGGTGGCG CCGGACGTGTCCACCTACAACACGCTCATCTGGGGGTTCGGCCTGTGCAAGAAGATGGAG ACCGCAGTCAGGGTGTTTGGGGACATGAAGGGCCATGGGGTGACCCCTGATGTCACCACC TACAACACCCTGCTGAACGCCTGGGTGCGTGCCGGTGATCTGGAGAGTGCGCGCAAGGTG TTTGATGAAATGGCTGGGGAGGGGACCGAGCGGAACTCGGTCTCGTACAATGTCATGATC AAGGGGTACGTGGAAGGCAATAGGGTGGAAGAGGCAGTGGCGTTGTTCGCTGAGATGGCT GAGAAAGGATTGAGGCTGAGTGAGAAGACATTTGCTGCGTTGATGCCAGGGCTTTGCGAT GACCAGGGCAGGGTGGCAGAGGCCCGGAAGGCAGTGGATGACATGGCAGAGCGGAGGCTC ACGCCAAAGGACAAGTCAGTGTTTCTGAGGCTTGTCACAACGCTGTGCAAGGCTGGTGAC TTGGATGGGGCGCTCGAGGTGCACTGGAAGAGCGGGCAGTTCAAGCATGTGCTGGTGGAT CCAAGACAGTATGGGGTGCTGATGGAAGGCCTTTGCGCTGGCGGCAAGTGCGAGACTGCT ATTGAGGTGCTAGATGAGCTTATGGAGAAGGGCACCTTGCTGAGCCCAAAGAGTCCTGTG CTTGAAGCATCGGCTTATAACCCGGTGATCGAGTTCCTGTGCAGCAATGTTACTGAGAAC ATGGATGTGGCACACAAGATACTGGAAGCTCTATTCACGAGGGGCCATGTCGAGGAGGCA ATCGGCCGTGTCAATCTGATGGTGGAAAATGGCTGCATGCCTGATCTGGATAAGTTGCTG GTCGGCCTATGTGACAATGGTAGAGTGATGGAGGCGCAGAAGCTGGCTGATTTTGCGTTG GACAGGGACTTTGATGTTAGCTTCTCGACCTATGACAGAGTTCTGGAGGCCCTGTACGCC GAAGAAAAGACGTTGCCTGCGTACTCCATGCTGTGCAAGATCAAGAACAAAGGAGGTGTT GTCAGCCAGAAAGGCTGCGATGACTTGATGGAGAGCTTAAAATCCGAAGGATACTCAAAG CAAGCAGATATTCTGTCTAGGATCTTGGCAGAGAATGCACAGTCGACGCCCAAGAGGGGC AGAAGGGTTGCCATGGGTGCTTAG

Peptide Sequence

PEP ID	Zm00001d014966_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:70373947:70376193:-1 gene:Zm00001d014966 transcript:Zm00001d014966_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MARRHLAYPLRLSILSRNPGAPARSLCASSSTHEVPVPAVEAQAEAEAAAKAAASPSPSA PANPPRREEPLHETVLHMIRRRPWTTRLENSIRLLSPTLDAPLVHGVISGAASAGRADLA LQFFRFAYRRGGFSPEGATFALLVPALASRRMLNHARCLVLDTMPSFSVAPDEPTLAALI SAYGRAAIPQEAVKLFRMMPNIGVPRTALSYNAVLKAILCRGREAMARRIYNAMIADGVA PDVSTYNTLIWGFGLCKKMETAVRVFGDMKGHGVTPDVTTYNTLLNAWVRAGDLESARKV FDEMAGEGTERNSVSYNVMIKGYVEGNRVEEAVALFAEMAEKGLRLSEKTFAALMPGLCD DQGRVAEARKAVDDMAERRLTPKDKSVFLRLVTTLCKAGDLDGALEVHWKSGQFKHVLVD PRQYGVLMEGLCAGGKCETAIEVLDELMEKGTLLSPKSPVLEASAYNPVIEFLCSNVTEN MDVAHKILEALFTRGHVEEAIGRVNLMVENGCMPDLDKLLVGLCDNGRVMEAQKLADFAL DRDFDVSFSTYDRVLEALYAEEKTLPAYSMLCKIKNKGGVVSQKGCDDLMESLKSEGYSK QADILSRILAENAQSTPKRGRRVAMGA

Transcript Sequence

Transcript ID	Zm00001d014966_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:70373947:70376193:-1 gene:Zm00001d014966 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGCGCGCCGCCACCTCGCCTACCCCCTGCGCCTCTCGATCCTCTCCCGCAATCCCGGA GCCCCTGCCCGCTCGCTATGCGCCTCATCGTCCACCCACGAGGTCCCAGTCCCGGCCGTC GAGGCCCAGGCGGAGGCGGAAGCGGCGGCGAAGGCTGCTGCGTCCCCCTCTCCGTCGGCG CCCGCCAACCCGCCCCGGCGCGAGGAGCCTCTCCACGAGACGGTGCTGCACATGATCCGG CGGCGGCCGTGGACGACGCGCCTGGAGAACTCGATCCGCCTGCTCTCGCCCACCCTCGAC GCGCCGCTGGTCCACGGCGTCATCTCCGGGGCCGCATCCGCGGGGCGCGCCGACCTCGCG CTCCAGTTCTTCCGCTTCGCATACCGCCGGGGCGGGTTCAGCCCGGAGGGCGCCACGTTC GCGCTCCTCGTGCCCGCGCTCGCGTCGCGCCGCATGCTCAACCACGCGCGCTGCCTCGTC CTCGACACCATGCCGTCCTTCTCCGTCGCGCCCGACGAGCCCACGCTCGCCGCGCTCATC TCCGCCTACGGCAGGGCCGCCATCCCGCAGGAGGCCGTTAAGCTGTTCCGGATGATGCCC AACATAGGCGTCCCCCGCACGGCGCTCTCCTACAACGCCGTACTCAAGGCCATACTCTGC CGCGGACGCGAGGCCATGGCCAGGCGGATCTACAACGCCATGATCGCGGACGGGGTGGCG CCGGACGTGTCCACCTACAACACGCTCATCTGGGGGTTCGGCCTGTGCAAGAAGATGGAG ACCGCAGTCAGGGTGTTTGGGGACATGAAGGGCCATGGGGTGACCCCTGATGTCACCACC TACAACACCCTGCTGAACGCCTGGGTGCGTGCCGGTGATCTGGAGAGTGCGCGCAAGGTG TTTGATGAAATGGCTGGGGAGGGGACCGAGCGGAACTCGGTCTCGTACAATGTCATGATC AAGGGGTACGTGGAAGGCAATAGGGTGGAAGAGGCAGTGGCGTTGTTCGCTGAGATGGCT GAGAAAGGATTGAGGCTGAGTGAGAAGACATTTGCTGCGTTGATGCCAGGGCTTTGCGAT GACCAGGGCAGGGTGGCAGAGGCCCGGAAGGCAGTGGATGACATGGCAGAGCGGAGGCTC ACGCCAAAGGACAAGTCAGTGTTTCTGAGGCTTGTCACAACGCTGTGCAAGGCTGGTGAC TTGGATGGGGCGCTCGAGGTGCACTGGAAGAGCGGGCAGTTCAAGCATGTGCTGGTGGAT CCAAGACAGTATGGGGTGCTGATGGAAGGCCTTTGCGCTGGCGGCAAGTGCGAGACTGCT ATTGAGGTGCTAGATGAGCTTATGGAGAAGGGCACCTTGCTGAGCCCAAAGAGTCCTGTG CTTGAAGCATCGGCTTATAACCCGGTGATCGAGTTCCTGTGCAGCAATGTTACTGAGAAC ATGGATGTGGCACACAAGATACTGGAAGCTCTATTCACGAGGGGCCATGTCGAGGAGGCA ATCGGCCGTGTCAATCTGATGGTGGAAAATGGCTGCATGCCTGATCTGGATAAGTTGCTG GTCGGCCTATGTGACAATGGTAGAGTGATGGAGGCGCAGAAGCTGGCTGATTTTGCGTTG GACAGGGACTTTGATGTTAGCTTCTCGACCTATGACAGAGTTCTGGAGGCCCTGTACGCC GAAGAAAAGACGTTGCCTGCGTACTCCATGCTGTGCAAGATCAAGAACAAAGGAGGTGTT GTCAGCCAGAAAGGCTGCGATGACTTGATGGAGAGCTTAAAATCCGAAGGATACTCAAAG CAAGCAGATATTCTGTCTAGGATCTTGGCAGAGAATGCACAGTCGACGCCCAAGAGGGGC AGAAGGGTTGCCATGGGTGCTTAG