Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014953_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:69658246:69679397:-1 gene:Zm00001d014953 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ferrochelatase

Sequence

ATGGAAGCTGAAGAAGTAGCGTGGATTTGTCATCTCGCGCTGCCACGTTTGACTTTGGAC
TTGCTGCCACGTTTGGTAGTTGCTACTTGCTACACCGGAGGAAGAAGAACAAGTAGTGCT
TTTCTTCTCTTGTCACGTTCACGGGGCGGCCGATCGACCGTTCACCTCGCCCGACGGCCC
AAGCAGCCCATGTCTTCGTCGGGCCCCTCCCCGGCGACGGGAATCCACGCGTCGCCGCCG
TTGGGCCTTTTGCCGGCGACGGGAACCCATCACACCAGGTCATGGGGCAAAACAACCTCC
ACAAGTTTTACTGGTTCTACCACCAAACATGAGCAGAGCTTGCATGGAAATGTTAAGCCG
TTGCAATTGGCGGCAAATGAATCCTCTCGTTTGGCTTACAGAAGTCCAGCACTTAAAAAC
CAGTGGAATCTTCCTGCTAGTTCTTCCTCCACTAATGTGGTTACCACCTTTGATGATAAC
GAACACGTGTCTTCCAGTGTTATTGAAGAAAAAGTTGGAGTACTGTTATTAAACCTTGGT
GGTCCAGAGACACTTGACGATGTTCAACCATTTTTATTCAACCTATTTGCTGATCCAGAT
ATCATTCGACTCCCTAGGCTCTTCAGGTTTCTTCAAAGACCACTGGCCAAACTTATTTCT
ACTTTTAGAGCTCCTAAGAGTAAAGAAGGGTATGCTTCAATTGGTGGTGGGTCGCCGTTA
AGGAAAATTACTGATGAACAGGCGAATGCTTTGAAGATTGCCCTGGAAAAGAAAAAATTG
AACGCAAACATATATGTTGGGATGCGGTATTGGTACCCTTTCACAGAAGAGGCCATTGAT
CAAATTAAAAAGGATAAGATTACCAAGCTCGTTGTTCTTCCCCTTTACCCTCAGTACTCC
ATATCAACAAGTGGGTCAAGCATTCGTGTTCTCCAAGACATTGTCAAGGAAGATTCATAT
TTTTCTGGTTTGCCAATTTCCATTATTGAATCATGGTACCAACGAGATGGCTATGTGAAA
TCAATGTCTGACCTAATTGAAAAGGAGCTCTCCGCCTTCTCCAATCCTGAAGAGGTTATG
ATATTCTTCAGTGCACATGGTGTGCCACTTACCTATGTTGAGGATGCTGGAGATCCTTAC
AGAGATCAGATGGAGGATTGTATTGCTTTGATCATGGGGGAGTTAAGATCAAGAGGAATC
TTAAATAGTCACACTTTGGCGTACCAGAGTCGGGTGGGGCCAGTTCAATGGCTGAAGCCA
TATACTGATGAAGTTTTAGTAGAACTTGGTCAAAAGGGTGTGAAGAGCCTCCTGGCTGTT
CCAGTAAGCTTTGTGAGTGAGCACATCGAGACATTGGAAGAAATTGACATGGAGTACAAG
GAGTTGGCTCTGGAATCAGGCATCAAGAACTGGGGTCGGGTTCCTGCTCTTGGATGCACT
TCAACATTCATCTCCGACCTTGCAGATGCTGTCGTCGAAGCCCTGCCCTCTGCTTCAGCG
CTCGCGACCAGAAAGCCTGACGACATCGATTCCAGCATGGACCTGACGCATTACCTCACC
AAGATGCTGTTTGGCTCAATCTTGGCATTTGTCCTGCTGCTATCACCAAGGCTAGTTTCC
GCCTTCCGGAGCACCATGCTTTAA

Peptide Sequence

PEP ID

Zm00001d014953_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:69658246:69679397:-1 gene:Zm00001d014953 transcript:Zm00001d014953_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ferrochelatase

Sequence

MEAEEVAWICHLALPRLTLDLLPRLVVATCYTGGRRTSSAFLLLSRSRGGRSTVHLARRP
KQPMSSSGPSPATGIHASPPLGLLPATGTHHTRSWGKTTSTSFTGSTTKHEQSLHGNVKP
LQLAANESSRLAYRSPALKNQWNLPASSSSTNVVTTFDDNEHVSSSVIEEKVGVLLLNLG
GPETLDDVQPFLFNLFADPDIIRLPRLFRFLQRPLAKLISTFRAPKSKEGYASIGGGSPL
RKITDEQANALKIALEKKKLNANIYVGMRYWYPFTEEAIDQIKKDKITKLVVLPLYPQYS
ISTSGSSIRVLQDIVKEDSYFSGLPISIIESWYQRDGYVKSMSDLIEKELSAFSNPEEVM
IFFSAHGVPLTYVEDAGDPYRDQMEDCIALIMGELRSRGILNSHTLAYQSRVGPVQWLKP
YTDEVLVELGQKGVKSLLAVPVSFVSEHIETLEEIDMEYKELALESGIKNWGRVPALGCT
STFISDLADAVVEALPSASALATRKPDDIDSSMDLTHYLTKMLFGSILAFVLLLSPRLVS
AFRSTML

Transcript Sequence

Transcript ID

Zm00001d014953_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:69658246:69679397:-1 gene:Zm00001d014953 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ferrochelatase

Sequence

TCTCAGGTTTTGTGAGTTCTGTCATATCTACGTGTAACGCTTTTTCAAAATTCCTTATGG
AAGCTGAAGAAGTAGCGTGGATTTGTCATCTCGCGCTGCCACGTTTGACTTTGGACTTGC
TGCCACGTTTGGTAGTTGCTACTTGCTACACCGGAGGAAGAAGAACAAGTAGTGCTTTTC
TTCTCTTGTCACGTTCACGGGGCGGCCGATCGACCGTTCACCTCGCCCGACGGCCCAAGC
AGCCCATGTCTTCGTCGGGCCCCTCCCCGGCGACGGGAATCCACGCGTCGCCGCCGTTGG
GCCTTTTGCCGGCGACGGGAACCCATCACACCAGGTCATGGGGCAAAACAACCTCCACAA
GTTTTACTGGTTCTACCACCAAACATGAGCAGAGCTTGCATGGAAATGTTAAGCCGTTGC
AATTGGCGGCAAATGAATCCTCTCGTTTGGCTTACAGAAGTCCAGCACTTAAAAACCAGT
GGAATCTTCCTGCTAGTTCTTCCTCCACTAATGTGGTTACCACCTTTGATGATAACGAAC
ACGTGTCTTCCAGTGTTATTGAAGAAAAAGTTGGAGTACTGTTATTAAACCTTGGTGGTC
CAGAGACACTTGACGATGTTCAACCATTTTTATTCAACCTATTTGCTGATCCAGATATCA
TTCGACTCCCTAGGCTCTTCAGGTTTCTTCAAAGACCACTGGCCAAACTTATTTCTACTT
TTAGAGCTCCTAAGAGTAAAGAAGGGTATGCTTCAATTGGTGGTGGGTCGCCGTTAAGGA
AAATTACTGATGAACAGGCGAATGCTTTGAAGATTGCCCTGGAAAAGAAAAAATTGAACG
CAAACATATATGTTGGGATGCGGTATTGGTACCCTTTCACAGAAGAGGCCATTGATCAAA
TTAAAAAGGATAAGATTACCAAGCTCGTTGTTCTTCCCCTTTACCCTCAGTACTCCATAT
CAACAAGTGGGTCAAGCATTCGTGTTCTCCAAGACATTGTCAAGGAAGATTCATATTTTT
CTGGTTTGCCAATTTCCATTATTGAATCATGGTACCAACGAGATGGCTATGTGAAATCAA
TGTCTGACCTAATTGAAAAGGAGCTCTCCGCCTTCTCCAATCCTGAAGAGGTTATGATAT
TCTTCAGTGCACATGGTGTGCCACTTACCTATGTTGAGGATGCTGGAGATCCTTACAGAG
ATCAGATGGAGGATTGTATTGCTTTGATCATGGGGGAGTTAAGATCAAGAGGAATCTTAA
ATAGTCACACTTTGGCGTACCAGAGTCGGGTGGGGCCAGTTCAATGGCTGAAGCCATATA
CTGATGAAGTTTTAGTAGAACTTGGTCAAAAGGGTGTGAAGAGCCTCCTGGCTGTTCCAG
TAAGCTTTGTGAGTGAGCACATCGAGACATTGGAAGAAATTGACATGGAGTACAAGGAGT
TGGCTCTGGAATCAGGCATCAAGAACTGGGGTCGGGTTCCTGCTCTTGGATGCACTTCAA
CATTCATCTCCGACCTTGCAGATGCTGTCGTCGAAGCCCTGCCCTCTGCTTCAGCGCTCG
CGACCAGAAAGCCTGACGACATCGATTCCAGCATGGACCTGACGCATTACCTCACCAAGA
TGCTGTTTGGCTCAATCTTGGCATTTGTCCTGCTGCTATCACCAAGGCTAGTTTCCGCCT
TCCGGAGCACCATGCTTTAAGTTTTTCTCCAAAGCACTAAATTTGAGATTGAGAATGAGA
TATTTCATTTTGGACCTTTTTTTCCTCCTTAATAGAATGATGTGCAGTTCTTCTGCTCGT
TCCAGAGAAAAAAATAACTGCTAGGAACTCACAAGGTAGTAGGGGATTGCAAAAGGGATG
TGAACAGCTGTTTTGATCGAAGTTGTCTATAAATACCGTGCTCACGGACTCTGTATTTTA
ATGGTTTCTTGTGCTCGACTAATTTTGTTGTTCTTGTC