Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014933_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:68959465:68961754:1 gene:Zm00001d014933 gene_biotype:protein_coding transcript_biotype:protein_coding description:WAT1-related protein

Sequence

ATGGCAAGCAGGACGACAGGCGGCGCATGGTCGATGGAGGCGGTGACGCTGCCGGCGAGC
ATGGTGCTGGTGCAGGTCTTCACCATGGTCGCCGTGCTCCTCTCCAAGCTGGCGCTGAAC
GTGGGGATGGAGCCCTTCGTCCTCCTCGCCTACCGCAACCTCATCGGCGCCATCATCGTC
GCTCCCTTGGCCTTCTACTTTGACAGGGCGATGGTGCGAAAGGTGACCCTCAAGGCCTTT
GGGTGGATGTCCATCAGCGCGCTCCTCGGGATCGTTCTCGCCATGGGTCTCTACTACTAC
GGCCTCCGCGCCACCAACGCCGCCATCTCCATCAACTTCCTCAACCTCATCCCCGTCGTC
ACCTTCCTCATGGCCGTGCTGCTCCGCGTCGAGAAGCTGGCGGCGGGGACGCGGGCGGGC
CGTGCCAAGCTGGCCGGCACGGCCGTGTGCGTGGGGGGCACCATGGTGGCCAGCCTCTAC
AGGGGCCCGCTGCTGCACCCGTGGCCGACGCACCTGCTCCACCACGCCGCCGCCACGGCC
CCGCACCACCACCGCAACATGCCGCTCGGCACCGTCTTCCTGTGCGCCAGCTGCCTGGCC
TACGCGCTCTGGTTCATCGTGCAGGCCCGCGTCGGCAGGGAGTTCCCCTGCAAGTACATG
TCCACGCTGCTGGCCTGCGTCTCCGGCACCGTCCAGGCGCTCGCCATCGCGGCCGTCATC
CGCGGGGGCGACCGGGACTCGTGGCTCCTCTCCTGGGACCTGCGCCTCCTCACCGTCGTC
TACTCGGGGGTCTTCAACACCGCCGCCACCTTCTGCCTCATCTCCTGGGCCATCGCCAGG
CGAGGGCCCATCTACCCCTCCATGTTCAACTCCCTCTCGCTCGTCGCCACCACCGTGCTC
GACTCGCTGCTGCTCGGCACCGACGTGTCCGTCGGCAGCCTGCTAGGCGCCCTGCTCATC
GTACTCGGACTCTACGCCTTCCTCTGGGGCAAAAGCACAGAGATGAGGCACCTCAAACAG
CAGCAGCAGCAGCAGCCCAACGCCAACGGGACGACGACCACGACGACCAACGCCGCCGAA
GACCACGTCTAG

Peptide Sequence

PEP ID

Zm00001d014933_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:68959465:68961754:1 gene:Zm00001d014933 transcript:Zm00001d014933_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:WAT1-related protein

Sequence

MASRTTGGAWSMEAVTLPASMVLVQVFTMVAVLLSKLALNVGMEPFVLLAYRNLIGAIIV
APLAFYFDRAMVRKVTLKAFGWMSISALLGIVLAMGLYYYGLRATNAAISINFLNLIPVV
TFLMAVLLRVEKLAAGTRAGRAKLAGTAVCVGGTMVASLYRGPLLHPWPTHLLHHAAATA
PHHHRNMPLGTVFLCASCLAYALWFIVQARVGREFPCKYMSTLLACVSGTVQALAIAAVI
RGGDRDSWLLSWDLRLLTVVYSGVFNTAATFCLISWAIARRGPIYPSMFNSLSLVATTVL
DSLLLGTDVSVGSLLGALLIVLGLYAFLWGKSTEMRHLKQQQQQQPNANGTTTTTTNAAE
DHV

Transcript Sequence

Transcript ID

Zm00001d014933_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:68959465:68961754:1 gene:Zm00001d014933 gene_biotype:protein_coding transcript_biotype:protein_coding description:WAT1-related protein

Sequence

ATCGAGAATTTGCATCCATGCATGTGTAGTAGTGCAGGGGGGAGCTGACACATGAGATCA
GCAGGAACAGTGAGGATCGTCCGACTCCCCGGCGTGGAGCTCGTCATCGATCGTCGCTCA
GCTAGTATATATGGCAAGCAGGACGACAGGCGGCGCATGGTCGATGGAGGCGGTGACGCT
GCCGGCGAGCATGGTGCTGGTGCAGGTCTTCACCATGGTCGCCGTGCTCCTCTCCAAGCT
GGCGCTGAACGTGGGGATGGAGCCCTTCGTCCTCCTCGCCTACCGCAACCTCATCGGCGC
CATCATCGTCGCTCCCTTGGCCTTCTACTTTGACAGGGCGATGGTGCGAAAGGTGACCCT
CAAGGCCTTTGGGTGGATGTCCATCAGCGCGCTCCTCGGGATCGTTCTCGCCATGGGTCT
CTACTACTACGGCCTCCGCGCCACCAACGCCGCCATCTCCATCAACTTCCTCAACCTCAT
CCCCGTCGTCACCTTCCTCATGGCCGTGCTGCTCCGCGTCGAGAAGCTGGCGGCGGGGAC
GCGGGCGGGCCGTGCCAAGCTGGCCGGCACGGCCGTGTGCGTGGGGGGCACCATGGTGGC
CAGCCTCTACAGGGGCCCGCTGCTGCACCCGTGGCCGACGCACCTGCTCCACCACGCCGC
CGCCACGGCCCCGCACCACCACCGCAACATGCCGCTCGGCACCGTCTTCCTGTGCGCCAG
CTGCCTGGCCTACGCGCTCTGGTTCATCGTGCAGGCCCGCGTCGGCAGGGAGTTCCCCTG
CAAGTACATGTCCACGCTGCTGGCCTGCGTCTCCGGCACCGTCCAGGCGCTCGCCATCGC
GGCCGTCATCCGCGGGGGCGACCGGGACTCGTGGCTCCTCTCCTGGGACCTGCGCCTCCT
CACCGTCGTCTACTCGGGGGTCTTCAACACCGCCGCCACCTTCTGCCTCATCTCCTGGGC
CATCGCCAGGCGAGGGCCCATCTACCCCTCCATGTTCAACTCCCTCTCGCTCGTCGCCAC
CACCGTGCTCGACTCGCTGCTGCTCGGCACCGACGTGTCCGTCGGCAGCCTGCTAGGCGC
CCTGCTCATCGTACTCGGACTCTACGCCTTCCTCTGGGGCAAAAGCACAGAGATGAGGCA
CCTCAAACAGCAGCAGCAGCAGCAGCCCAACGCCAACGGGACGACGACCACGACGACCAA
CGCCGCCGAAGACCACGTCTAGCAACTAAATGCATGCAGTATGCATGGTAAATAAATCAA
ATTGAGCAGCTAGCTAGAACTAGCTAGATCGAAGGAGTAAATTCGATCGATCGATCGGCC
GATCTCATCATGCATGTACTCCTACGTAGACAGACACACACAAATTAAGAGACACACAGG
GATCGGAGAGAGAGACGCAAATGTCAATCTCGTAAGCCAGAAAATGAAACACTAGTCACC
CCTATCCTATCCTATCATATCAGGTTTCATAGGTCAAGCATAGACTGTATTAATTACTTT
ATTGTCTTCTAGAAAGAGGTATTCTTGTTGGGAATTGTATTAAGATATCATGTGTTGTAG
ACTTGTAGTATACTAGTACTTGTTAGTATT