Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014906_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:5:67681087:67684923:1 gene:Zm00001d014906 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoinositide phospholipase C 4
Sequence

ATGGGCAGCTACGCGTACAAGTACTGTATGTGCTTCACGCGCAAGTTCCGATCCCCGGAC
GCCCAGCCGCCGCCGGACGTCCGCGCCGCCCACCTCTCCTTCGCCTCTGACGCCCATGCC
CTCCGCCGCTTCGTCGCCGGCGTCCAGGGCGAGTCCCCCGCCGACGTCGACCGCATCCTC
GCCATGCTCTCCGGGGGCCACAGCCATGGAATCGCCCGCCTCGTCACAAGGTCGCCGGCG
GCATCCACGCCCACGCTCGAAGACTTCTTCGCCTTCCTCTTCTCCCCCGACCTCAACCCA
CCCATCGCGCACCAGGTTCACCAGGACATGTCAGCGCCGTTCTCTCACTATTTCGTGTTC
ACCGGGCATAATTCCTACCTCACTGGGAACCAGCTCAATAGTGACTCCAGTGACGTCCCA
ATTGTAAAGGCGTTGCAGAGAGGTGTTAGAGTCATTGAACTCGATATGTGGCCCAATCCT
TCAAAGGACAATGTCGATATTCTTCATGGAGGGACATTGACTGCCCCAGTGGAAATGATC
AAATGTTTGAAGTCCATCAAAGAATACGCCTTCTGTGCCTCAAATTATCCTCTTGTTATT
ACTCTTGAGGATCACCTCACATCAGATCTCCAAGCTAAAGTTGCTACGATGCTCACTGAA
ACATTTGGAGATCTTCTTTTCGTCCCTAATCCAGACCCGATGAAAGAGTTTCCTTCTCCA
GCATCTCTAATGAAGAGAATAATCATATCAACCAAACCTCCACAAGAATATAAGGAGTTT
CTCAAAGCCGAGAATAATCGCAGTGGCAGCGGAAACATAGCTGAGTTGCCAGACCAAGGA
AGCCTGAGAAGAATAGATTCAAATGCCGATGAATCTGATGGGAAGGATGAACTGGATGAG
CAAGACGAGGAAGACTCCGACGAGGACGATCCCAAATTTCAGCAGGATACAGCCTGTGAG
TATAGGAAACTCATCACCATCCAAGCTGGCAAACCAAAAGGCCATTTGCGGGATGCGCTA
AAAGTGGATCCAGACAAAGTCAGGCGGCTTTCTTTGAGCGAGACACAGTTAGCTAAAGCG
ACAATCTCTCATGGTGCTGAAGTCATAAGGTTCACACAGAAGAATATACTCCGTGTGTAT
CCAAAGGGCACGAGGGTTAATTCTTCAAACTACGATCCAATGAACGCCTGGACCCATGGT
GCGCAGATGGTTGCGTTCAACATGCAGGGCCATGATAAAGCGCTCCGGTTGATGCAAGGG
TTTTTCAGAGCCAATGGGGGCTGTGGTTATGTTAAAAAGCCTGACTTCTTGCTAAGAACA
GGTCCAAATGGGGAAGTATTTGACCCCAAGGCTAGTTTGCCAGTGAAGAAAACCCTCAAG
GTGAAAGTTTATATGGGAGACGGGTGGCGCATGGACTTCAGTAAAACTCATTTCGATGCC
TTTTCGCCTCCAGATTTCTATACTAGGGTAGGGATCGCAGGTGTGAAGGCAGACAGTGTG
ATGAAGAAGACAAGGGTGATTGAGGACCAGTGGGTGCCGATGTGGGATGAGGAGTTCACG
TTCCTTCTGACGGTTCCGGAGCTGGCCCTCCTGAGGGTAGAGGTCCAGGAGTACGACATG
TCGGAGAAGCACGACTTCGGGGGGCAGACAGTCTTGCCGGTATGGGAGCTGAAGCAGGGC
ATCCGTGCTGTGCCCCTGCACGATCGCAAGGGTGTCAGGTACAAGTCCGTCAGGCTCCTC
ATGCGATTTGATTTTGTGTAG

Peptide Sequence

PEP ID

Zm00001d014906_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:5:67681087:67684923:1 gene:Zm00001d014906 transcript:Zm00001d014906_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoinositide phospholipase C 4
Sequence

MGSYAYKYCMCFTRKFRSPDAQPPPDVRAAHLSFASDAHALRRFVAGVQGESPADVDRIL
AMLSGGHSHGIARLVTRSPAASTPTLEDFFAFLFSPDLNPPIAHQVHQDMSAPFSHYFVF
TGHNSYLTGNQLNSDSSDVPIVKALQRGVRVIELDMWPNPSKDNVDILHGGTLTAPVEMI
KCLKSIKEYAFCASNYPLVITLEDHLTSDLQAKVATMLTETFGDLLFVPNPDPMKEFPSP
ASLMKRIIISTKPPQEYKEFLKAENNRSGSGNIAELPDQGSLRRIDSNADESDGKDELDE
QDEEDSDEDDPKFQQDTACEYRKLITIQAGKPKGHLRDALKVDPDKVRRLSLSETQLAKA
TISHGAEVIRFTQKNILRVYPKGTRVNSSNYDPMNAWTHGAQMVAFNMQGHDKALRLMQG
FFRANGGCGYVKKPDFLLRTGPNGEVFDPKASLPVKKTLKVKVYMGDGWRMDFSKTHFDA
FSPPDFYTRVGIAGVKADSVMKKTRVIEDQWVPMWDEEFTFLLTVPELALLRVEVQEYDM
SEKHDFGGQTVLPVWELKQGIRAVPLHDRKGVRYKSVRLLMRFDFV

Transcript Sequence

Transcript ID

Zm00001d014906_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:67681087:67684923:1 gene:Zm00001d014906 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoinositide phospholipase C 4
Sequence

AAGAGGGAGGAGTAATTATTTATTAATTAACAAAGAGAAGACTTCTTCCTTCCTCGTCGT
CTCCAGCCCATTCCAATTCTTGATTCCATCGCCCCACCATCCACAACTCCCCTAATCCTT
CCAACCTCCTCGTCGTCCAGTCCACCACCTCCACGCGCAATGGCCAGCGGCTAGGCGGCA
CCAACCAGATCACAAGGATTCGTTTCATCCGGCAGCGCAGCTCTAGAGCCTCCATGGGCA
GCTACGCGTACAAGTACTGTATGTGCTTCACGCGCAAGTTCCGATCCCCGGACGCCCAGC
CGCCGCCGGACGTCCGCGCCGCCCACCTCTCCTTCGCCTCTGACGCCCATGCCCTCCGCC
GCTTCGTCGCCGGCGTCCAGGGCGAGTCCCCCGCCGACGTCGACCGCATCCTCGCCATGC
TCTCCGGGGGCCACAGCCATGGAATCGCCCGCCTCGTCACAAGGTCGCCGGCGGCATCCA
CGCCCACGCTCGAAGACTTCTTCGCCTTCCTCTTCTCCCCCGACCTCAACCCACCCATCG
CGCACCAGGTTCACCAGGACATGTCAGCGCCGTTCTCTCACTATTTCGTGTTCACCGGGC
ATAATTCCTACCTCACTGGGAACCAGCTCAATAGTGACTCCAGTGACGTCCCAATTGTAA
AGGCGTTGCAGAGAGGTGTTAGAGTCATTGAACTCGATATGTGGCCCAATCCTTCAAAGG
ACAATGTCGATATTCTTCATGGAGGGACATTGACTGCCCCAGTGGAAATGATCAAATGTT
TGAAGTCCATCAAAGAATACGCCTTCTGTGCCTCAAATTATCCTCTTGTTATTACTCTTG
AGGATCACCTCACATCAGATCTCCAAGCTAAAGTTGCTACGATGCTCACTGAAACATTTG
GAGATCTTCTTTTCGTCCCTAATCCAGACCCGATGAAAGAGTTTCCTTCTCCAGCATCTC
TAATGAAGAGAATAATCATATCAACCAAACCTCCACAAGAATATAAGGAGTTTCTCAAAG
CCGAGAATAATCGCAGTGGCAGCGGAAACATAGCTGAGTTGCCAGACCAAGGAAGCCTGA
GAAGAATAGATTCAAATGCCGATGAATCTGATGGGAAGGATGAACTGGATGAGCAAGACG
AGGAAGACTCCGACGAGGACGATCCCAAATTTCAGCAGGATACAGCCTGTGAGTATAGGA
AACTCATCACCATCCAAGCTGGCAAACCAAAAGGCCATTTGCGGGATGCGCTAAAAGTGG
ATCCAGACAAAGTCAGGCGGCTTTCTTTGAGCGAGACACAGTTAGCTAAAGCGACAATCT
CTCATGGTGCTGAAGTCATAAGGTTCACACAGAAGAATATACTCCGTGTGTATCCAAAGG
GCACGAGGGTTAATTCTTCAAACTACGATCCAATGAACGCCTGGACCCATGGTGCGCAGA
TGGTTGCGTTCAACATGCAGGGCCATGATAAAGCGCTCCGGTTGATGCAAGGGTTTTTCA
GAGCCAATGGGGGCTGTGGTTATGTTAAAAAGCCTGACTTCTTGCTAAGAACAGGTCCAA
ATGGGGAAGTATTTGACCCCAAGGCTAGTTTGCCAGTGAAGAAAACCCTCAAGGTGAAAG
TTTATATGGGAGACGGGTGGCGCATGGACTTCAGTAAAACTCATTTCGATGCCTTTTCGC
CTCCAGATTTCTATACTAGGGTAGGGATCGCAGGTGTGAAGGCAGACAGTGTGATGAAGA
AGACAAGGGTGATTGAGGACCAGTGGGTGCCGATGTGGGATGAGGAGTTCACGTTCCTTC
TGACGGTTCCGGAGCTGGCCCTCCTGAGGGTAGAGGTCCAGGAGTACGACATGTCGGAGA
AGCACGACTTCGGGGGGCAGACAGTCTTGCCGGTATGGGAGCTGAAGCAGGGCATCCGTG
CTGTGCCCCTGCACGATCGCAAGGGTGTCAGGTACAAGTCCGTCAGGCTCCTCATGCGAT
TTGATTTTGTGTAGCCGAGCCGAGCCGCCATTCAGATTCAGCTTCTGTTTTTTTCCTTCT
TGTGTGAATTGAATGTATTACTCCCTTCCTTCCATCTTCAACGTATATGTGTATGTATGT
ACTTATTTTTGTCGGAATAAAAGTTGTATGGAATGGAATGGAAGGAAGGAGTAGAACTGT
CTTCAAACTCCAGCTTCTAGATCTGTACGGGTGATTCAGTTTTACTTGCTGGCACATTGT
TTGTTTGTTTACTTTACTGGAGATAGATTTGTACATTAGCTTGATTATTCTTCATT