Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d014900_T058
CDS Infomation	cds chromosome:B73_RefGen_v4:5:67354587:67363533:1 gene:Zm00001d014900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 29 description:transcription factor jumonji (jmjC) domain-containing protein
Sequence	ATGTTCCAGGAGCTGGAGGGTTTTCTCCTTGCTGCGGATGGTGCCAACTTTAGCATTCCA GAGCTGAACATTCTTAAGCAACATTACTCAAATTGTTGCTCTTGGGTGAGTCGTGCTAAG AACATACTCAGAAAACTTTATGCTACGAGTGACTATCACAATGCTGTTGAGGAGTTGACA GGCATTCTGAAGGAAGCAGAATTACTAGGAGTAAAAGTTGATGAATTGCCTATTGTGGAG AAAGAACTAAAGAGGTCCTTATGTAGGAAGCAAGCATCTGAGGCACTTGCAACAGTAATG CCAATGGAGGTGGTTGAAGAAATTTTAAAAGAAGCTTCGATACTACATATTGAAGAGGAG CAACCATTTGATGATCTGTCTCGGATGCTCAAAGAGGCCACTTCCTGGGAAGAGAAGGCT AGACTTATTCTTGAACGATCAGCTTCTCTCTCTGAGTTTGAAGACCATATGAGGTGTTCA GAGGGAATAAGAGTTATCCTTCCGTCTAAACTGCATATGAAAGCAGAGGTTGATATTGCT AAATTGTGGATAGACAAATGTCAGGCCTATTTGAGACCAGGCTGCAATAAACTTGCATTT GGAGACTTTCTTAAAGTTGATGATATCAAGGATTTAATCAATCAGCCTGCAAATTTGAAA GTCATTCTTGACACTTCAGAACTTAATTCTGTTCTCAACAATATTGAAAAATGGGAACAC AGTTCACTAAGTCTACTCAATAATTTTAGAGCCTTACTTCATTTGAATAGTATTGGCTCT ACAGTTGACACACTTCAAAGAAAATTGGAGGAGCTGCAAGGTAAAATGAACACAGAAATA GAAGTTGGATTATCTCTTGGTTTTGAGTTCAAGGTTCTTTGGGAACTGAAGGATTCTTCG TTGATGCTAAGATGGATATTGAATGCACTGTCTCTGTGCTGTATGATTCCTTTATTGCAG GATGTTGATAGATTAATTGAAGAAGCAGTCCACCTTCCTGCTTCCTTAGCAGATTGTTCT TTGGTTACATTGTTGATGAGGGCATTGTCTTGTCTAAGAAAATCACTTATTTTGCTTCCT GGTTCTGGAACATCTGCAAAATCCAAATTGGAAGATGTTGAAAATATTCTAGCAGAATTC AAGGAGGTTGATGTTCCTTATCCTATCATGACTGCCAAGCTGGAGGATGCTGTAAACAAT CATAATTCATGGATAGAGCAATGCAATACCTTCTTCATGCTGTCTGATGGCCAGTCGTGG GCTATGCTGCAAAATCTCAGGGACAATGGGCAGTCTGTTGCATTTGATTGCCCTGAGATG GATAAAGTTGTTGATGAGGTTAAAAACGTTGAAGAGTGGCTCAATCAGTGCCACTGTACT CTACTTCTAGATGGAAATAATAGTTCTTTGCTCTCCATACTTGTAAAGATAAGAGGATTA TTGGATGATGTTTGCACGTTATATGCTGAGGATTGTATGAAGTTAAGATTATGTGCTGTA TGCTCATGTGACATCGGAGATAGGCTGGCATCTAGATGTGTGACTTGTCAAGACTGGTAC CATGGCTCCTGCGTGGAAAACCTGTCTGCTACTACACAAACGACAATTGAATGGATGTGT TCATTTTGTTCACTTTTACAGAGTGAGGACCAATTGAAGAACCAACTATCTGTAAAGATG TCTAAAGGAAACTGCCCTGCACTTGCCGCACTTGATGAACTCATCTCTTCTGCAAAGGGT TTATACACTGGGATTGAGGAAATTAATTTGCTAAAAGAAATTGTTGATAAGGCTCGTAAC TTGAATGCCTACTTGATGCAAATTCTGGATGATTCAGACTGTTATCATGGAGAAGATCTT ACTGTCATATTCAAATCTCTTTTAGTTGCTCTCAAGGCGACATCAGCTTCTGGCTTGTAT GATGACAATGTCAGTTGCAGAATTGAGTCTGTTTTGAGCAGATATTTGTGGAAGAAACAA ATACATAAACTATTGTATGGTGGTAAAAAGTCATCGATTCAAGAAGTACTGTGCCTTGAT GAAGAGGGTTCACATTTAGAGATATGTGATCAAGATTTCTTCAAGTTGGAGATTAGTAAA ATAAAGGAAACCAGCCTGCAGTGGCTGGCTAAAGCAGAGGAGGTTGCATGTGATTCTGGT GAGCTTGCACTGGATCTTGTGTATGGACTTATAGCTGAAGGGGAAAATCTCTCTGTAGAC TTTGAGAAGGAACTAAAGTTACTGAGGGATCGCAGTGTCCTCTACTGCATCTGCTGTAAG CCCGACGATAACAGGGCCATGATTGCATGCGACCAGTGTGATGAGTGGTACCATTTTGAT TGCATCAACCTGCTTGGACCCCCTCCAGAAAGCTTCTTCTGCCCTGCTTGCCATCCAAAC AATGGTGAAGAATCTGTATCACTTGCACGCTCAGAGGATGATGAGGATAGATCAAGCACT GGAGCCGGAGCTCACACGCCGCCGGACAGAGTGGTGGAGCGAGACTTAATAAAGCTTCTT AGCTGCCATAGCGGTAGCTCATGGAGCGAGAGCAGAAGGGCTCCTCATCGAACAGCTAGA AGGCGTAGTAGTTTCGTCGGATTGTTATGA

Peptide Sequence

PEP ID	Zm00001d014900_P058
PEP Infomation	pep chromosome:B73_RefGen_v4:5:67354587:67363533:1 gene:Zm00001d014900 transcript:Zm00001d014900_T058 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 29 description:transcription factor jumonji (jmjC) domain-containing protein
Sequence	MFQELEGFLLAADGANFSIPELNILKQHYSNCCSWVSRAKNILRKLYATSDYHNAVEELT GILKEAELLGVKVDELPIVEKELKRSLCRKQASEALATVMPMEVVEEILKEASILHIEEE QPFDDLSRMLKEATSWEEKARLILERSASLSEFEDHMRCSEGIRVILPSKLHMKAEVDIA KLWIDKCQAYLRPGCNKLAFGDFLKVDDIKDLINQPANLKVILDTSELNSVLNNIEKWEH SSLSLLNNFRALLHLNSIGSTVDTLQRKLEELQGKMNTEIEVGLSLGFEFKVLWELKDSS LMLRWILNALSLCCMIPLLQDVDRLIEEAVHLPASLADCSLVTLLMRALSCLRKSLILLP GSGTSAKSKLEDVENILAEFKEVDVPYPIMTAKLEDAVNNHNSWIEQCNTFFMLSDGQSW AMLQNLRDNGQSVAFDCPEMDKVVDEVKNVEEWLNQCHCTLLLDGNNSSLLSILVKIRGL LDDVCTLYAEDCMKLRLCAVCSCDIGDRLASRCVTCQDWYHGSCVENLSATTQTTIEWMC SFCSLLQSEDQLKNQLSVKMSKGNCPALAALDELISSAKGLYTGIEEINLLKEIVDKARN LNAYLMQILDDSDCYHGEDLTVIFKSLLVALKATSASGLYDDNVSCRIESVLSRYLWKKQ IHKLLYGGKKSSIQEVLCLDEEGSHLEICDQDFFKLEISKIKETSLQWLAKAEEVACDSG ELALDLVYGLIAEGENLSVDFEKELKLLRDRSVLYCICCKPDDNRAMIACDQCDEWYHFD CINLLGPPPESFFCPACHPNNGEESVSLARSEDDEDRSSTGAGAHTPPDRVVERDLIKLL SCHSGSSWSESRRAPHRTARRRSSFVGLL

Transcript Sequence

Transcript ID	Zm00001d014900_T058
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:67354587:67363533:1 gene:Zm00001d014900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 29 description:transcription factor jumonji (jmjC) domain-containing protein
Sequence	GTATTTTTGGGATGATTTTAGATGTTCTGTTCCTCTATTGTGAATGTTCCAGGAGCTGGA GGGTTTTCTCCTTGCTGCGGATGGTGCCAACTTTAGCATTCCAGAGCTGAACATTCTTAA GCAACATTACTCAAATTGTTGCTCTTGGGTGAGTCGTGCTAAGAACATACTCAGAAAACT TTATGCTACGAGTGACTATCACAATGCTGTTGAGGAGTTGACAGGCATTCTGAAGGAAGC AGAATTACTAGGAGTAAAAGTTGATGAATTGCCTATTGTGGAGAAAGAACTAAAGAGGTC CTTATGTAGGAAGCAAGCATCTGAGGCACTTGCAACAGTAATGCCAATGGAGGTGGTTGA AGAAATTTTAAAAGAAGCTTCGATACTACATATTGAAGAGGAGCAACCATTTGATGATCT GTCTCGGATGCTCAAAGAGGCCACTTCCTGGGAAGAGAAGGCTAGACTTATTCTTGAACG ATCAGCTTCTCTCTCTGAGTTTGAAGACCATATGAGGTGTTCAGAGGGAATAAGAGTTAT CCTTCCGTCTAAACTGCATATGAAAGCAGAGGTTGATATTGCTAAATTGTGGATAGACAA ATGTCAGGCCTATTTGAGACCAGGCTGCAATAAACTTGCATTTGGAGACTTTCTTAAAGT TGATGATATCAAGGATTTAATCAATCAGCCTGCAAATTTGAAAGTCATTCTTGACACTTC AGAACTTAATTCTGTTCTCAACAATATTGAAAAATGGGAACACAGTTCACTAAGTCTACT CAATAATTTTAGAGCCTTACTTCATTTGAATAGTATTGGCTCTACAGTTGACACACTTCA AAGAAAATTGGAGGAGCTGCAAGGTAAAATGAACACAGAAATAGAAGTTGGATTATCTCT TGGTTTTGAGTTCAAGGTTCTTTGGGAACTGAAGGATTCTTCGTTGATGCTAAGATGGAT ATTGAATGCACTGTCTCTGTGCTGTATGATTCCTTTATTGCAGGATGTTGATAGATTAAT TGAAGAAGCAGTCCACCTTCCTGCTTCCTTAGCAGATTGTTCTTTGGTTACATTGTTGAT GAGGGCATTGTCTTGTCTAAGAAAATCACTTATTTTGCTTCCTGGTTCTGGAACATCTGC AAAATCCAAATTGGAAGATGTTGAAAATATTCTAGCAGAATTCAAGGAGGTTGATGTTCC TTATCCTATCATGACTGCCAAGCTGGAGGATGCTGTAAACAATCATAATTCATGGATAGA GCAATGCAATACCTTCTTCATGCTGTCTGATGGCCAGTCGTGGGCTATGCTGCAAAATCT CAGGGACAATGGGCAGTCTGTTGCATTTGATTGCCCTGAGATGGATAAAGTTGTTGATGA GGTTAAAAACGTTGAAGAGTGGCTCAATCAGTGCCACTGTACTCTACTTCTAGATGGAAA TAATAGTTCTTTGCTCTCCATACTTGTAAAGATAAGAGGATTATTGGATGATGTTTGCAC GTTATATGCTGAGGATTGTATGAAGTTAAGATTATGTGCTGTATGCTCATGTGACATCGG AGATAGGCTGGCATCTAGATGTGTGACTTGTCAAGACTGGTACCATGGCTCCTGCGTGGA AAACCTGTCTGCTACTACACAAACGACAATTGAATGGATGTGTTCATTTTGTTCACTTTT ACAGAGTGAGGACCAATTGAAGAACCAACTATCTGTAAAGATGTCTAAAGGAAACTGCCC TGCACTTGCCGCACTTGATGAACTCATCTCTTCTGCAAAGGGTTTATACACTGGGATTGA GGAAATTAATTTGCTAAAAGAAATTGTTGATAAGGCTCGTAACTTGAATGCCTACTTGAT GCAAATTCTGGATGATTCAGACTGTTATCATGGAGAAGATCTTACTGTCATATTCAAATC TCTTTTAGTTGCTCTCAAGGCGACATCAGCTTCTGGCTTGTATGATGACAATGTCAGTTG CAGAATTGAGTCTGTTTTGAGCAGATATTTGTGGAAGAAACAAATACATAAACTATTGTA TGGTGGTAAAAAGTCATCGATTCAAGAAGTACTGTGCCTTGATGAAGAGGGTTCACATTT AGAGATATGTGATCAAGATTTCTTCAAGTTGGAGATTAGTAAAATAAAGGAAACCAGCCT GCAGTGGCTGGCTAAAGCAGAGGAGGTTGCATGTGATTCTGGTGAGCTTGCACTGGATCT TGTGTATGGACTTATAGCTGAAGGGGAAAATCTCTCTGTAGACTTTGAGAAGGAACTAAA GTTACTGAGGGATCGCAGTGTCCTCTACTGCATCTGCTGTAAGCCCGACGATAACAGGGC CATGATTGCATGCGACCAGTGTGATGAGTGGTACCATTTTGATTGCATCAACCTGCTTGG ACCCCCTCCAGAAAGCTTCTTCTGCCCTGCTTGCCATCCAAACAATGGTGAAGAATCTGT ATCACTTGCACGCTCAGAGGATGATGAGGATAGATCAAGCACTGGAGCCGGAGCTCACAC GCCGCCGGACAGAGTGGTGGAGCGAGACTTAATAAAGCTTCTTAGCTGCCATAGCGGTAG CTCATGGAGCGAGAGCAGAAGGGCTCCTCATCGAACAGCTAGAAGGCGTAGTAGTTTCGT CGGATTGTTATGATGTGCAGGAACCTTCTTAGCACCGTGAATTGATTCTTTTTAGTTAGG TTAGAAGCAGGAACGATCCATCATCTGCTGTTGTAATTTGTAGCTGTTGACAGGAGGTAG ATGTAGCAAGGCAGAGCTGTAAGAACCCATTATTATTGATCTTGTAGCAGTCTGAGGTTT TGGAAATTGTATCATATACTACCGCCGTTCTTGAATATTTGTCGCCTATTGTTTCAAAAA ACGACAAAT