Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d014897_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:5:67135190:67139444:-1 gene:Zm00001d014897 gene_biotype:protein_coding transcript_biotype:protein_coding description:proline-rich spliceosome-associated (PSP) family protein
Sequence	ATGGCCGCCGCCGCCGAGGTAGACCCCAGCCCCAACCCGCCGCCAACTACAGCCTCCGGC CTCTCCAAGACCAAGACGCGGGAGGCCGACCGCCGCCGACGCCGCCGCAGCAAGGCCAAG AAGAACAAGTCCGTCACTGAGGCTGATGCCCAGGACGCTGACGGGGGAGCTTCCAGCTCC GACGCCAAGGAGAACGCCGATCCCAACCCCGAGCCACAGGTTGAGGTGGAGATAGAGTAC GTGCCGGAGAAGGCCGAGCTTGACGACCCTCTCCTGGATGATTTCAAGGCCATCTTCGAG AAGTTCACCTTCAAGGACGCTGCTGCAGCGGCGGCCGAGGATGATAAGAAAGACGAGGGT GCCGCTGATGCCACAAAGAAGGGGTCACTGGATGATGATGACGACGACGAAGATGATGAG CAGGAGGCAAACAAGAAGAAGGACGGAGGCCTATCCAATAAGAAGAAGAAGCTGGAACGC AGGATGAAGATTGCAGACCTCAAACAGATATGCAACAGACCTGACGTCGTGGAGGTCTGG GATGCAACTGCTGCAGATCCAAAATTGCTTGTATATCTCAAGGCGTACCGAAATACAGTA CCTGTCCCTAGGCACTGGTCTCAGAAGCGCAAGTTCTTGCAGTTTCAGGGGAAGAGAGGT ATTGAGAAACAGCCTTTCCAGCTTCCTGACTTCATTGCTGCAACTGGAATAGAAAAGATA AGACAGGCTTATATTGAGAAAGAGGATAGCAAGAAGTTGAAACAGAAACAGCGTGAGCGT ATGCAGCCCAAGATGGGCAAAATGGATATAGATTATCAGGTTTTGCATGACGCGTTCTTC AAATATCAGACAAAACCCAAGCTGTCTAGTCATGGTGATCTGTATTATGAAGGCAAAGAA TTTGAGGTTAAACTGAGGGAAATGAAGCCAGGCATGCTGTCTCGTGAGCTTAAAGATGCT CTTGGTATGCCTGATGGCGCCCCTCCCCCATGGCTTATAAACATGCAGCGCTATGGTCCA CCTCCATCTTATCCCCAACTGAAGATCCCAGGTCTAAATGCCCCAATCCCCCCTGGTGCC AGTTTTGGTTATAGACCAGGGGAGTGGGGAAAGCCACCAGTTGATGAGCATGGACGTCCA CTCTATGGAGACGTTTTTGGTGTTCTGCAGCAGGACGAACCTAACTACGATGATGAACCT GTTGATCGCAGCAAACACTGGGGAGATTTGGAGGAAGAGGAGGAGGAAGAAGAGGAAGAG GAGGAAGAGGAAGAACCAATGGAAGACGAGGAAATGGAAGACGGAATTCAGTCTGTCGAT ACCATCTCAAGTACTCCAACTGGTGTTGAAACACCTGATGTTATCGACCTTCGGAAGCTG CAGAGGAAGGAGACTGACAAGCAGGCAGAACGGCCGCTGTACCAGGTTCTTGAACAAAAG GAAGAAAGGATCGCCCCTGGGACTCTATATGGGTCAAGCCATACGTATGTGTTGGGAACA CAAGATAAATCATCAGCTCCGAAAAGGGTGGATCTGCTTAAGAATCAAAAGTCAGACAAG GTGGACGTCACCATCCAACCCGAGGAACTGGAAGCCATGGATGATGTTCTGGCAGCCAAG TATGAAGAAGCTCGAGAGGAAGAGAAGCTTCGGAACCAAAAGGAGGACTTCAGTGACATG GTGGCAGAGAATGCTCACAAGAGGAAGAGGAAGCAAGAGAAGGAAGGCAAGTCGAAGAAG AAGGAATTCAAGTTTTAA

Peptide Sequence

PEP ID	Zm00001d014897_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:5:67135190:67139444:-1 gene:Zm00001d014897 transcript:Zm00001d014897_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:proline-rich spliceosome-associated (PSP) family protein
Sequence	MAAAAEVDPSPNPPPTTASGLSKTKTREADRRRRRRSKAKKNKSVTEADAQDADGGASSS DAKENADPNPEPQVEVEIEYVPEKAELDDPLLDDFKAIFEKFTFKDAAAAAAEDDKKDEG AADATKKGSLDDDDDDEDDEQEANKKKDGGLSNKKKKLERRMKIADLKQICNRPDVVEVW DATAADPKLLVYLKAYRNTVPVPRHWSQKRKFLQFQGKRGIEKQPFQLPDFIAATGIEKI RQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLSSHGDLYYEGKE FEVKLREMKPGMLSRELKDALGMPDGAPPPWLINMQRYGPPPSYPQLKIPGLNAPIPPGA SFGYRPGEWGKPPVDEHGRPLYGDVFGVLQQDEPNYDDEPVDRSKHWGDLEEEEEEEEEE EEEEEPMEDEEMEDGIQSVDTISSTPTGVETPDVIDLRKLQRKETDKQAERPLYQVLEQK EERIAPGTLYGSSHTYVLGTQDKSSAPKRVDLLKNQKSDKVDVTIQPEELEAMDDVLAAK YEEAREEEKLRNQKEDFSDMVAENAHKRKRKQEKEGKSKKKEFKF

Transcript Sequence

Transcript ID	Zm00001d014897_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:67135190:67139444:-1 gene:Zm00001d014897 gene_biotype:protein_coding transcript_biotype:protein_coding description:proline-rich spliceosome-associated (PSP) family protein
Sequence	ACCGCACACACGCCAACCGGCCTACCGCCTTCTTCTCTTGTCTCGTCCTCCTCGCGACTA TGGCCGCCGCCGCCGAGGTAGACCCCAGCCCCAACCCGCCGCCAACTACAGCCTCCGGCC TCTCCAAGACCAAGACGCGGGAGGCCGACCGCCGCCGACGCCGCCGCAGCAAGGCCAAGA AGAACAAGTCCGTCACTGAGGCTGATGCCCAGGACGCTGACGGGGGAGCTTCCAGCTCCG ACGCCAAGGAGAACGCCGATCCCAACCCCGAGCCACAGGTTGAGGTGGAGATAGAGTACG TGCCGGAGAAGGCCGAGCTTGACGACCCTCTCCTGGATGATTTCAAGGCCATCTTCGAGA AGTTCACCTTCAAGGACGCTGCTGCAGCGGCGGCCGAGGATGATAAGAAAGACGAGGGTG CCGCTGATGCCACAAAGAAGGGGTCACTGGATGATGATGACGACGACGAAGATGATGAGC AGGAGGCAAACAAGAAGAAGGACGGAGGCCTATCCAATAAGAAGAAGAAGCTGGAACGCA GGATGAAGATTGCAGACCTCAAACAGATATGCAACAGACCTGACGTCGTGGAGGTCTGGG ATGCAACTGCTGCAGATCCAAAATTGCTTGTATATCTCAAGGCGTACCGAAATACAGTAC CTGTCCCTAGGCACTGGTCTCAGAAGCGCAAGTTCTTGCAGTTTCAGGGGAAGAGAGGTA TTGAGAAACAGCCTTTCCAGCTTCCTGACTTCATTGCTGCAACTGGAATAGAAAAGATAA GACAGGCTTATATTGAGAAAGAGGATAGCAAGAAGTTGAAACAGAAACAGCGTGAGCGTA TGCAGCCCAAGATGGGCAAAATGGATATAGATTATCAGGTTTTGCATGACGCGTTCTTCA AATATCAGACAAAACCCAAGCTGTCTAGTCATGGTGATCTGTATTATGAAGGCAAAGAAT TTGAGGTTAAACTGAGGGAAATGAAGCCAGGCATGCTGTCTCGTGAGCTTAAAGATGCTC TTGGTATGCCTGATGGCGCCCCTCCCCCATGGCTTATAAACATGCAGCGCTATGGTCCAC CTCCATCTTATCCCCAACTGAAGATCCCAGGTCTAAATGCCCCAATCCCCCCTGGTGCCA GTTTTGGTTATAGACCAGGGGAGTGGGGAAAGCCACCAGTTGATGAGCATGGACGTCCAC TCTATGGAGACGTTTTTGGTGTTCTGCAGCAGGACGAACCTAACTACGATGATGAACCTG TTGATCGCAGCAAACACTGGGGAGATTTGGAGGAAGAGGAGGAGGAAGAAGAGGAAGAGG AGGAAGAGGAAGAACCAATGGAAGACGAGGAAATGGAAGACGGAATTCAGTCTGTCGATA CCATCTCAAGTACTCCAACTGGTGTTGAAACACCTGATGTTATCGACCTTCGGAAGCTGC AGAGGAAGGAGACTGACAAGCAGGCAGAACGGCCGCTGTACCAGGTTCTTGAACAAAAGG AAGAAAGGATCGCCCCTGGGACTCTATATGGGTCAAGCCATACGTATGTGTTGGGAACAC AAGATAAATCATCAGCTCCGAAAAGGGTGGATCTGCTTAAGAATCAAAAGTCAGACAAGG TGGACGTCACCATCCAACCCGAGGAACTGGAAGCCATGGATGATGTTCTGGCAGCCAAGT ATGAAGAAGCTCGAGAGGAAGAGAAGCTTCGGAACCAAAAGGAGGACTTCAGTGACATGG TGGCAGAGAATGCTCACAAGAGGAAGAGGAAGCAAGAGAAGGAAGGCAAGTCGAAGAAGA AGGAATTCAAGTTTTAAGGGCAGGCGGGCGATGTAGGTCATGAGGCACCGTTGTAGCTGT TCCAAATATGACTGGCTGTATGGTTTAGTTGCTGCGATCAGACAGTTCCGTTCCGTGTTC CAAGTTCCAACCGAGAGGTCGGGCTCATTCGCTTGGTTAACACAAATGTCGCTTTGGATT TT