Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014890_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:67038410:67041166:-1 gene:Zm00001d014890 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription elongation factor (TFIIS) family protein
Sequence

ATGCTTGAGGATTTCTTCACTCTTACTGAGATGAAGGAAGGGATATCAACGGTTGCAAGG
ATCACAGAGCTCATATCTGAGATGCGCAAGCTGGAAAACTCCGTGGACATCAACACATTT
GACGTGATAAGGCAGTGCTCCACGGCTGCCAACACACTAGCATCCACCAAAAACGAAGAG
TGTCTTCAGCATTTTGTTCAGCTAAATGGTGTTTCCATTCTCAACCATTGGCTTCAGGAT
GCTCAAAATTGTGGTGGGGACGTCAGCAATCCAGCTGCTGAGGATCTCATAGTTGCGATA
TTGACTGCATTGGACTGTCTTCCGATCAGCAATGAGCAATCAGTCTCCTGTGGGGTTATG
CCTACTGTTGGTCACCTGCTGGCTCACAGAATTGCCGTGATCAACCAAAAGGCAAGAGCA
CTCTGTCACAAGTGGGGCGGTGTACCAAAACATGGTACAAATGGAGAGCATTTTCATACA
GAGGAGTCAAGCCACACTGACCAGCTTAAGTCTCCAGATGCCGGCCACAAGACAGAAACT
AAGAGAAAGTGTGTAGTGGACGAAGGAGAGCCTGATGAAGAATCAAAACCTGAGGTGACA
ACTCACTCAGATGCACCTTTGTCCGACCCTTCTCTGACTAATGATAATGCAGATGCAACA
GAGCAACCAGCAGGGCTAACTTCACCAAATCCATCAAACGGAAATGCAACATTAGGGGAT
GTGAACAACTTGGTCAGGTCTCCTACATCTGCAGGTCATGTGGGTTTAGAAGATGGGCAG
TCCACCCCCAATGAAATTTCTTCCAATGATGCTGAACTGCCCATTAATGGCATACTCCGG
TCAAACTCTACTAATGCAAAAAGTGGTACTGGACAAGATGCTCCAGTGGAATCAACTCCA
GTGGCCATGTCTGTAGACCATAATAAACCTGGAAAGTTGTTTCCTGGTAGTAAAATGGGT
CTGGAGGATAGTATTATTTCAGTTAGCTCAAGTATCAAGGAGTCTCAGCCATTTGCAGCT
GGTAGATCACATTTGGAGAAGGATACAACTGAAACTTTGAACCATCTTGCAGTTGTAACC
CGTGATTTGCAAGATTTGTCCGAGGAAAGTACAAGCAAAGAAGATGAACCTACATCATCA
TCTAGTACAGATGATATGGACATGAGCGGTGATTATATATTGCAAAGATGCATGTCGAGC
TTTGGGGGCTCCTCCAAGGCAGCAGACACAAAATCCACTGCATTGGAAGGGGAGAAATCA
ACACGAATGGCAGACTTTGATGATACAGATGCACTAGAAGTTGCACGTCTGGTAGCTATT
GAGGTGGAGCGGGAAGTCATTGACTACAGAGAACCCTTTTGTAGTTCTCCTGATACTAAT
TCCAGGAATGCTGACAGTCCTGACCTGGAAGGACCACGGCAGCCTGTAGCCATTGCCAGT
GAACTGAATGATAATAAATCTTCCAGTACAGAGGCTAAGTCAGGAAGCTCCTCATCTCAT
AAGGAGGATGGATCAGGCATCACAGATGGCAGCGGTCCGTTGAGTAGAAAACATACACAC
AGTGTCGATCTGGGGAACTTAGACCTTAATGAAAATCAGTGTGCCGAGGAAACTGACTTT
AATCCGAAGTCGATCCTTAGTAATTCTGTCAATTTGTCAATGCCTATAGCTGTGGCTGCA
TCAAGAGGCTCATCTGTGTTTCCAGCTCGGCTCCACTTTGAAGGTGGACTTGGGTGGAAA
GGCTCTGCTGCAACCAGCGCCTTTCGACCAGCTCCACCTCGGAGGACTCCTGATGCAGAG
AAGTCACTTTCAGCTTCTTCACATAAAACAAGCAACATATTATTTGATTTAAATGTAGCT
GACAACGGCAGTGCTACTTCTGGTGAACCACTTTCGACAGCAATCCTGCCAGCTTCTTCT
GAACTACCTTCCGAGGTTGCTTCCAAAGCAGTTGATGTGAGCGGAGGACTGAAACTTGAC
CTTAATTTCTCATGTGGTGATGAGGAAGATGCTATCACTGCAAGCAATGTGCCGTCATTG
TGGAATCACCAACAATTTAATGGCAACTGGAGTCAGCCTTCTTTCTCATCTTCAAAGCAA
CCTGCAGCCAGAAACTTTGACTTGAATGACAACATGTCGATCGCTGATGTTTCTGTGCGA
GGAATGGACGGGTCTTCTGTCAAGACTCCTTCAAGGCCAAGGGATATGTCGGACCATTCT
GCCGTCACAATTATGGGTAAGAGGATAGTTGTAGGACAGAGAGATGATGGACAGCAATAC
CAGCATAACTTTCTGGGACCAAGTGCTGAATCAAGAGTTTTTGCAAGACCCACTCAATCT
TTTGCACATACTCCTGATTATAGTGTTCTCAGTTATCCATCTCAACCTGCCATGCCTTTT
ACCCCAGCGTTCTTTGCCCCAGGGGGCAGTCCATACTTGGTGGATGCAAAAGGTGCACCA
GTCATACCACCGCTGTCAGGTCTAAGCCTCGGCATTTCTCATCCATCTTTCAACACCAGA
GCAACACAGCCCTCATCTAATGAACTGAGTTACTTCCATCCTAGCGTGGATTTCAGTTAT
GGAGTGTCATCTGAAGGCGCACGTAGGGAAGCAGGGAGCTACTGGCCCATGTCCTACCAG
GGTCAGACAATGTTTGTGGATGAACGCATGAGGAATGTATCACAGGATGGTACTTCTGGG
TTGGTGCTGAAGCGAAAAGAGCCAGAGTCAGGTTGGGATTTGTACCCACGTCGTTGA

Peptide Sequence

PEP ID

Zm00001d014890_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:67038410:67041166:-1 gene:Zm00001d014890 transcript:Zm00001d014890_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription elongation factor (TFIIS) family protein
Sequence

MLEDFFTLTEMKEGISTVARITELISEMRKLENSVDINTFDVIRQCSTAANTLASTKNEE
CLQHFVQLNGVSILNHWLQDAQNCGGDVSNPAAEDLIVAILTALDCLPISNEQSVSCGVM
PTVGHLLAHRIAVINQKARALCHKWGGVPKHGTNGEHFHTEESSHTDQLKSPDAGHKTET
KRKCVVDEGEPDEESKPEVTTHSDAPLSDPSLTNDNADATEQPAGLTSPNPSNGNATLGD
VNNLVRSPTSAGHVGLEDGQSTPNEISSNDAELPINGILRSNSTNAKSGTGQDAPVESTP
VAMSVDHNKPGKLFPGSKMGLEDSIISVSSSIKESQPFAAGRSHLEKDTTETLNHLAVVT
RDLQDLSEESTSKEDEPTSSSSTDDMDMSGDYILQRCMSSFGGSSKAADTKSTALEGEKS
TRMADFDDTDALEVARLVAIEVEREVIDYREPFCSSPDTNSRNADSPDLEGPRQPVAIAS
ELNDNKSSSTEAKSGSSSSHKEDGSGITDGSGPLSRKHTHSVDLGNLDLNENQCAEETDF
NPKSILSNSVNLSMPIAVAASRGSSVFPARLHFEGGLGWKGSAATSAFRPAPPRRTPDAE
KSLSASSHKTSNILFDLNVADNGSATSGEPLSTAILPASSELPSEVASKAVDVSGGLKLD
LNFSCGDEEDAITASNVPSLWNHQQFNGNWSQPSFSSSKQPAARNFDLNDNMSIADVSVR
GMDGSSVKTPSRPRDMSDHSAVTIMGKRIVVGQRDDGQQYQHNFLGPSAESRVFARPTQS
FAHTPDYSVLSYPSQPAMPFTPAFFAPGGSPYLVDAKGAPVIPPLSGLSLGISHPSFNTR
ATQPSSNELSYFHPSVDFSYGVSSEGARREAGSYWPMSYQGQTMFVDERMRNVSQDGTSG
LVLKRKEPESGWDLYPRR

Transcript Sequence

Transcript ID

Zm00001d014890_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:67038410:67041166:-1 gene:Zm00001d014890 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription elongation factor (TFIIS) family protein
Sequence

ATGCTTGAGGATTTCTTCACTCTTACTGAGATGAAGGAAGGGATATCAACGGTTGCAAGG
ATCACAGAGCTCATATCTGAGATGCGCAAGCTGGAAAACTCCGTGGACATCAACACATTT
GACGTGATAAGGCAGTGCTCCACGGCTGCCAACACACTAGCATCCACCAAAAACGAAGAG
TGTCTTCAGCATTTTGTTCAGCTAAATGGTGTTTCCATTCTCAACCATTGGCTTCAGGAT
GCTCAAAATTGTGGTGGGGACGTCAGCAATCCAGCTGCTGAGGATCTCATAGTTGCGATA
TTGACTGCATTGGACTGTCTTCCGATCAGCAATGAGCAATCAGTCTCCTGTGGGGTTATG
CCTACTGTTGGTCACCTGCTGGCTCACAGAATTGCCGTGATCAACCAAAAGGCAAGAGCA
CTCTGTCACAAGTGGGGCGGTGTACCAAAACATGGTACAAATGGAGAGCATTTTCATACA
GAGGAGTCAAGCCACACTGACCAGCTTAAGTCTCCAGATGCCGGCCACAAGACAGAAACT
AAGAGAAAGTGTGTAGTGGACGAAGGAGAGCCTGATGAAGAATCAAAACCTGAGGTGACA
ACTCACTCAGATGCACCTTTGTCCGACCCTTCTCTGACTAATGATAATGCAGATGCAACA
GAGCAACCAGCAGGGCTAACTTCACCAAATCCATCAAACGGAAATGCAACATTAGGGGAT
GTGAACAACTTGGTCAGGTCTCCTACATCTGCAGGTCATGTGGGTTTAGAAGATGGGCAG
TCCACCCCCAATGAAATTTCTTCCAATGATGCTGAACTGCCCATTAATGGCATACTCCGG
TCAAACTCTACTAATGCAAAAAGTGGTACTGGACAAGATGCTCCAGTGGAATCAACTCCA
GTGGCCATGTCTGTAGACCATAATAAACCTGGAAAGTTGTTTCCTGGTAGTAAAATGGGT
CTGGAGGATAGTATTATTTCAGTTAGCTCAAGTATCAAGGAGTCTCAGCCATTTGCAGCT
GGTAGATCACATTTGGAGAAGGATACAACTGAAACTTTGAACCATCTTGCAGTTGTAACC
CGTGATTTGCAAGATTTGTCCGAGGAAAGTACAAGCAAAGAAGATGAACCTACATCATCA
TCTAGTACAGATGATATGGACATGAGCGGTGATTATATATTGCAAAGATGCATGTCGAGC
TTTGGGGGCTCCTCCAAGGCAGCAGACACAAAATCCACTGCATTGGAAGGGGAGAAATCA
ACACGAATGGCAGACTTTGATGATACAGATGCACTAGAAGTTGCACGTCTGGTAGCTATT
GAGGTGGAGCGGGAAGTCATTGACTACAGAGAACCCTTTTGTAGTTCTCCTGATACTAAT
TCCAGGAATGCTGACAGTCCTGACCTGGAAGGACCACGGCAGCCTGTAGCCATTGCCAGT
GAACTGAATGATAATAAATCTTCCAGTACAGAGGCTAAGTCAGGAAGCTCCTCATCTCAT
AAGGAGGATGGATCAGGCATCACAGATGGCAGCGGTCCGTTGAGTAGAAAACATACACAC
AGTGTCGATCTGGGGAACTTAGACCTTAATGAAAATCAGTGTGCCGAGGAAACTGACTTT
AATCCGAAGTCGATCCTTAGTAATTCTGTCAATTTGTCAATGCCTATAGCTGTGGCTGCA
TCAAGAGGCTCATCTGTGTTTCCAGCTCGGCTCCACTTTGAAGGTGGACTTGGGTGGAAA
GGCTCTGCTGCAACCAGCGCCTTTCGACCAGCTCCACCTCGGAGGACTCCTGATGCAGAG
AAGTCACTTTCAGCTTCTTCACATAAAACAAGCAACATATTATTTGATTTAAATGTAGCT
GACAACGGCAGTGCTACTTCTGGTGAACCACTTTCGACAGCAATCCTGCCAGCTTCTTCT
GAACTACCTTCCGAGGTTGCTTCCAAAGCAGTTGATGTGAGCGGAGGACTGAAACTTGAC
CTTAATTTCTCATGTGGTGATGAGGAAGATGCTATCACTGCAAGCAATGTGCCGTCATTG
TGGAATCACCAACAATTTAATGGCAACTGGAGTCAGCCTTCTTTCTCATCTTCAAAGCAA
CCTGCAGCCAGAAACTTTGACTTGAATGACAACATGTCGATCGCTGATGTTTCTGTGCGA
GGAATGGACGGGTCTTCTGTCAAGACTCCTTCAAGGCCAAGGGATATGTCGGACCATTCT
GCCGTCACAATTATGGGTAAGAGGATAGTTGTAGGACAGAGAGATGATGGACAGCAATAC
CAGCATAACTTTCTGGGACCAAGTGCTGAATCAAGAGTTTTTGCAAGACCCACTCAATCT
TTTGCACATACTCCTGATTATAGTGTTCTCAGTTATCCATCTCAACCTGCCATGCCTTTT
ACCCCAGCGTTCTTTGCCCCAGGGGGCAGTCCATACTTGGTGGATGCAAAAGGTGCACCA
GTCATACCACCGCTGTCAGGTCTAAGCCTCGGCATTTCTCATCCATCTTTCAACACCAGA
GCAACACAGCCCTCATCTAATGAACTGAGTTACTTCCATCCTAGCGTGGATTTCAGTTAT
GGAGTGTCATCTGAAGGCGCACGTAGGGAAGCAGGGAGCTACTGGCCCATGTCCTACCAG
GGTCAGACAATGTTTGTGGATGAACGCATGAGGAATGTATCACAGGATGGTACTTCTGGG
TTGGTGCTGAAGCGAAAAGAGCCAGAGTCAGGTTGGGATTTGTACCCACGTCGTTGA