Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014887_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:5:67027340:67030023:1 gene:Zm00001d014887 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nana plant2 description: nana plant2
Sequence

ATGGCGGACGTGCACGAACCTTTGGTGCGCCGTAAGAGGAAGAAGGTTTTGGTGGACTAC
TTGGTGAAGTTCCGATGGATCCTCGTGATCTTCGTGGTCCTTCCTATTTCAACTCTGATC
TACTTCAACATCTTCCTGGGCGACATGTGGTCCGCCATGAAGTCGGAGAAGAAGCGCCAG
AAGCAGCACGACGAGAACGTGCAGAAGGTCGTGAAGCGGCTCAAGCAGAGGAACCCGAAG
AAGGACGGTCTTGTTTGCACGGCCAGGAAGCCCTGGATCGCTGTTGGCATGCGCAACGTG
GACTACAAGCGTGCGAGGCATTTCGAGGTCGACCTTTCTTCCTTCAGGAACATCCTTGAG
ATCGACAAAGAGAGGATGGTTGCCAAGGTCGAGCCCCTTGTCAACATGGGTCAGATAACC
AGAGCTACCTGCCCAATGAACCTTGCCCTTGCGGTCGTCGCCGAGCTCGACGACCTCACT
GTTGGTGGGCTGATCAACGGTTACGGCATCGAGGGGAGCTCTCACCTCTATGGCCTTTTC
TCCGACACGGTTGTCGCGATGGAGGTTGTTCTCGCAGATGGCCGGGTCGTCAGAGCCACC
AAGGACAACGAGTACTCTGACCTTTTCTATGGCATTCCCTGGTCCCAGGGAACACTGGGG
TTCCTTGTCTCTGCGGAGATCAAGCTGATCCCCATCAAGGAGTACATGAAGCTCACCTAC
ACTCCAGTCAAGGGGGGTCTAAAGGAGATCGCGCAGGCCTACGCGGATTCTTTCGCGCCG
AGGGACGGTGACCCGGCAAAGGTCCCTGACTTTGTTGAAGGGATGGTGTACACAGAGAGC
GAGGGTGTCATGATGACGGGCGTGTACGCTTCCAAAGAAGAGGCGAAGAAGAAGGGCAAC
AAGATCAACTGCGTGGGGTGGTGGTTTAAGCCCTGGTTCTACCAGCACGCTCAGACGGCG
CTGAAGAGGGGCGAGTTTGTGGAGTACATCCCGACGAGGGAGTACTACCACCGGCACACC
CGGTGCCTGTACTGGGAGGGGAAGCTGATCCTGCCCTTCGGCGACCAGTTCTGGTTCAGG
TTCCTGCTGGGCTGGCTGATGCCACCGAAGGTGTCCCTGCTGAAGGCGACCCAGGGCGAG
GCTATCAGGAACTACTACCACGACAACCATGTGATCCAGGACATGCTGGTGCCGCTGTAC
AAGGTTGGGGATGCGCTGGAGTTCGTGCACCGCGAGATGGAGGTGTATCCTCTGTGGCTG
TGCCCTCACCGGCTGTACAAGCTGCCGGTGAAGACGATGGTGTACCCGGAGCCTGGGTTC
GAGCACCAGCACAGGCAGGGCGACACGAGCTACGCACAGATGTTCACGGACGTGGGCGTG
TACTACGCCCCCGGGGCGGTGCTGAGGGGGGAGGAGTTCAACGGCGCGGAGGCTGTGCAC
AGGCTGGAGCAGTGGCTGATCGAGAACCACAGCTACCAGCCGCAGTACGCGGTGTCGGAG
CTGAACGAGAAGGACTTCTGGCGCATGTTCGACGCGTCGCACTACGAGCACTGCCGCCAA
AAGTACGGGGCGGTGGGCACGTTCATGAGCGTGTACTACAAGTCCAAGAAGGGGCGCAAG
ACGGAGAAGGAGGTGCAGGAGGCGGAGGCGGCCATACTGGAGCCGGCCTACGCGGACGAG
GAGGCCTAA

Peptide Sequence

PEP ID

Zm00001d014887_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:5:67027340:67030023:1 gene:Zm00001d014887 transcript:Zm00001d014887_T005 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nana plant2 description: nana plant2
Sequence

MADVHEPLVRRKRKKVLVDYLVKFRWILVIFVVLPISTLIYFNIFLGDMWSAMKSEKKRQ
KQHDENVQKVVKRLKQRNPKKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSSFRNILE
IDKERMVAKVEPLVNMGQITRATCPMNLALAVVAELDDLTVGGLINGYGIEGSSHLYGLF
SDTVVAMEVVLADGRVVRATKDNEYSDLFYGIPWSQGTLGFLVSAEIKLIPIKEYMKLTY
TPVKGGLKEIAQAYADSFAPRDGDPAKVPDFVEGMVYTESEGVMMTGVYASKEEAKKKGN
KINCVGWWFKPWFYQHAQTALKRGEFVEYIPTREYYHRHTRCLYWEGKLILPFGDQFWFR
FLLGWLMPPKVSLLKATQGEAIRNYYHDNHVIQDMLVPLYKVGDALEFVHREMEVYPLWL
CPHRLYKLPVKTMVYPEPGFEHQHRQGDTSYAQMFTDVGVYYAPGAVLRGEEFNGAEAVH
RLEQWLIENHSYQPQYAVSELNEKDFWRMFDASHYEHCRQKYGAVGTFMSVYYKSKKGRK
TEKEVQEAEAAILEPAYADEEA

Transcript Sequence

Transcript ID

Zm00001d014887_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:67027340:67030023:1 gene:Zm00001d014887 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nana plant2 description: nana plant2
Sequence

AGAAACAAACTGTAGGAGGTTGCTGCGGTGGTCCCTGTGGGGTTCTACTGCTTTAGGATT
ATTTTCTGGGATCTGTTTTTTTTCCAGCCCGAGTATGCATGCCGTCGAGTAGCAACCACC
ACCCATGGCGGACGTGCACGAACCTTTGGTGCGCCGTAAGAGGAAGAAGGTTTTGGTGGA
CTACTTGGTGAAGTTCCGATGGATCCTCGTGATCTTCGTGGTCCTTCCTATTTCAACTCT
GATCTACTTCAACATCTTCCTGGGCGACATGTGGTCCGCCATGAAGTCGGAGAAGAAGCG
CCAGAAGCAGCACGACGAGAACGTGCAGAAGGTCGTGAAGCGGCTCAAGCAGAGGAACCC
GAAGAAGGACGGTCTTGTTTGCACGGCCAGGAAGCCCTGGATCGCTGTTGGCATGCGCAA
CGTGGACTACAAGCGTGCGAGGCATTTCGAGGTCGACCTTTCTTCCTTCAGGAACATCCT
TGAGATCGACAAAGAGAGGATGGTTGCCAAGGTCGAGCCCCTTGTCAACATGGGTCAGAT
AACCAGAGCTACCTGCCCAATGAACCTTGCCCTTGCGGTCGTCGCCGAGCTCGACGACCT
CACTGTTGGTGGGCTGATCAACGGTTACGGCATCGAGGGGAGCTCTCACCTCTATGGCCT
TTTCTCCGACACGGTTGTCGCGATGGAGGTTGTTCTCGCAGATGGCCGGGTCGTCAGAGC
CACCAAGGACAACGAGTACTCTGACCTTTTCTATGGCATTCCCTGGTCCCAGGGAACACT
GGGGTTCCTTGTCTCTGCGGAGATCAAGCTGATCCCCATCAAGGAGTACATGAAGCTCAC
CTACACTCCAGTCAAGGGGGGTCTAAAGGAGATCGCGCAGGCCTACGCGGATTCTTTCGC
GCCGAGGGACGGTGACCCGGCAAAGGTCCCTGACTTTGTTGAAGGGATGGTGTACACAGA
GAGCGAGGGTGTCATGATGACGGGCGTGTACGCTTCCAAAGAAGAGGCGAAGAAGAAGGG
CAACAAGATCAACTGCGTGGGGTGGTGGTTTAAGCCCTGGTTCTACCAGCACGCTCAGAC
GGCGCTGAAGAGGGGCGAGTTTGTGGAGTACATCCCGACGAGGGAGTACTACCACCGGCA
CACCCGGTGCCTGTACTGGGAGGGGAAGCTGATCCTGCCCTTCGGCGACCAGTTCTGGTT
CAGGTTCCTGCTGGGCTGGCTGATGCCACCGAAGGTGTCCCTGCTGAAGGCGACCCAGGG
CGAGGCTATCAGGAACTACTACCACGACAACCATGTGATCCAGGACATGCTGGTGCCGCT
GTACAAGGTTGGGGATGCGCTGGAGTTCGTGCACCGCGAGATGGAGGTGTATCCTCTGTG
GCTGTGCCCTCACCGGCTGTACAAGCTGCCGGTGAAGACGATGGTGTACCCGGAGCCTGG
GTTCGAGCACCAGCACAGGCAGGGCGACACGAGCTACGCACAGATGTTCACGGACGTGGG
CGTGTACTACGCCCCCGGGGCGGTGCTGAGGGGGGAGGAGTTCAACGGCGCGGAGGCTGT
GCACAGGCTGGAGCAGTGGCTGATCGAGAACCACAGCTACCAGCCGCAGTACGCGGTGTC
GGAGCTGAACGAGAAGGACTTCTGGCGCATGTTCGACGCGTCGCACTACGAGCACTGCCG
CCAAAAGTACGGGGCGGTGGGCACGTTCATGAGCGTGTACTACAAGTCCAAGAAGGGGCG
CAAGACGGAGAAGGAGGTGCAGGAGGCGGAGGCGGCCATACTGGAGCCGGCCTACGCGGA
CGAGGAGGCCTAAAAGCTCGTGGTCGTTTTGCTTAGCCCATTTTAATTAGAACTTGATGG
ATGTAGTGTGTGTCTGTCTCAAGTCATTTTAATTAGAACTCTTAAAGCTCGTGGTCGGTC
GGTCAGTCAGTCAGTCATTGTCGTTGATGTCCAGCGTTGTGTTTTTTTTATATTCTCTAA
TGGAATCTCTCAGATTGATTCGGGACTTGCTATGGCTCTGC