Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014885_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:67005734:67007272:-1 gene:Zm00001d014885 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc knuckle (CCHC-type) family protein
Sequence

ATGGCCGCGCCGCCGCCCACGGGCTGCTTCAAGTGTGGCCGCCCCGGCCACTGGTCCCGC
GACTGCCCCTCCTCCGCCTCCACCAACCCTCCTGCCGCCGCCGACGCGCCCACCAACCCT
AGCCACCTCTCCGGCGCCGCCTCCCGCTTCAACGCCAAGCCCAGGCCCCCCGCGGCGGCG
GTGGATGGCGAGGACGGCAAGGGGAAGAAGAAGAAGGAGAGGGCCACGCGCCCCAAGCTC
ACGCCGGACCTGCTCCTCTCCGACGGCGGCATCGGCTTCGTGCTCCGCTACTTCCCCAAG
GCGTTCAAGCCCCGCGCCCGCCCAGGCCACGAGGTGGACGACCTCGCTAACCTCATCAAG
CTCTACGCGGACTGGCACTCCCGCCTGATCCCCTACTACTCCTTCGAACAGTTCGTGCGC
AAACTCGAGAAATTGGGTGCCGGCAACCGCGTCAGGAGATGTGTTTCCGAACTCAGGGAT
AGGGTCGCCAGAGGCGGTGATCCTACGCTTCTGCACGAACCGCCAGTCCACGAAGACATG
CCATTGCCAGGCGGAGGTGAACATGGTACTGAAGACCCAGTTCTCGGCACCGATGCTCCG
CTGTCGGACAACCATGGCACTGGCCCCGTGGTGCAGGAAGACGCAGATCCACCGATGGAG
AGCAACGACGTGGTGGATCCCATGGAAGAGGATCTGCTTAACGAAATCTACGAAAACACA
GCTGATATCCCGGCTGGTGAGGGAGCCAGCAAGGAGTCTCCGGAGCAGTCGGCTCCAAAA
GAAGCCAACTCGCTGGCGCAGGAACCCCAGGACGGCGACGTCCCCAAGCCGGCGAAGGTT
GAGCTCACTGAGGCGCAGAAGGCACGCATGGAGGCCAACAGGCTCAAGGCCTTGGAGAGA
GCGGCGGCACGGGCTCGTGCCTCGCAGCAGCCCACCTAG

Peptide Sequence

PEP ID

Zm00001d014885_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:67005734:67007272:-1 gene:Zm00001d014885 transcript:Zm00001d014885_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc knuckle (CCHC-type) family protein
Sequence

MAAPPPTGCFKCGRPGHWSRDCPSSASTNPPAAADAPTNPSHLSGAASRFNAKPRPPAAA
VDGEDGKGKKKKERATRPKLTPDLLLSDGGIGFVLRYFPKAFKPRARPGHEVDDLANLIK
LYADWHSRLIPYYSFEQFVRKLEKLGAGNRVRRCVSELRDRVARGGDPTLLHEPPVHEDM
PLPGGGEHGTEDPVLGTDAPLSDNHGTGPVVQEDADPPMESNDVVDPMEEDLLNEIYENT
ADIPAGEGASKESPEQSAPKEANSLAQEPQDGDVPKPAKVELTEAQKARMEANRLKALER
AAARARASQQPT

Transcript Sequence

Transcript ID

Zm00001d014885_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:67005734:67007272:-1 gene:Zm00001d014885 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc knuckle (CCHC-type) family protein
Sequence

GCCCAGGACCAGGAGCAAGATCCATCCATCCATCCCCGATTCCCCAACCCTAAGCAGCCA
TGGCCGCGCCGCCGCCCACGGGCTGCTTCAAGTGTGGCCGCCCCGGCCACTGGTCCCGCG
ACTGCCCCTCCTCCGCCTCCACCAACCCTCCTGCCGCCGCCGACGCGCCCACCAACCCTA
GCCACCTCTCCGGCGCCGCCTCCCGCTTCAACGCCAAGCCCAGGCCCCCCGCGGCGGCGG
TGGATGGCGAGGACGGCAAGGGGAAGAAGAAGAAGGAGAGGGCCACGCGCCCCAAGCTCA
CGCCGGACCTGCTCCTCTCCGACGGCGGCATCGGCTTCGTGCTCCGCTACTTCCCCAAGG
CGTTCAAGCCCCGCGCCCGCCCAGGCCACGAGGTGGACGACCTCGCTAACCTCATCAAGC
TCTACGCGGACTGGCACTCCCGCCTGATCCCCTACTACTCCTTCGAACAGTTCGTGCGCA
AACTCGAGAAATTGGGTGCCGGCAACCGCGTCAGGAGATGTGTTTCCGAACTCAGGGATA
GGGTCGCCAGAGGCGGTGATCCTACGCTTCTGCACGAACCGCCAGTCCACGAAGACATGC
CATTGCCAGGCGGAGGTGAACATGGTACTGAAGACCCAGTTCTCGGCACCGATGCTCCGC
TGTCGGACAACCATGGCACTGGCCCCGTGGTGCAGGAAGACGCAGATCCACCGATGGAGA
GCAACGACGTGGTGGATCCCATGGAAGAGGATCTGCTTAACGAAATCTACGAAAACACAG
CTGATATCCCGGCTGGTGAGGGAGCCAGCAAGGAGTCTCCGGAGCAGTCGGCTCCAAAAG
AAGCCAACTCGCTGGCGCAGGAACCCCAGGACGGCGACGTCCCCAAGCCGGCGAAGGTTG
AGCTCACTGAGGCGCAGAAGGCACGCATGGAGGCCAACAGGCTCAAGGCCTTGGAGAGAG
CGGCGGCACGGGCTCGTGCCTCGCAGCAGCCCACCTAGATACGCAAGATGCTGCTGTCTT
CACTTCACTTCAATAGTTGGTTGGTTGGTTGAGATGATGCATCATTCTGTGGTGTGTCAT
TGACAAGGACACGTAGTTCGCTGGTGTCTGATTGAATCTGGGTCTGCTCTAGTCGATTTG
GTCCCTAGTAGTATGTAACAGGAGAAGATAAGAGTTTGTTGGATGTGCTTGAAAGCTTCG
TCCTGTTCTCGCTTCCCCAACCATTCTAGAGTCAGAATTCCATGTCATTCAAGCTGATCT
TCTCATTCATCGTTTTGCTGCATAGTGCGTCTTGGTCCAATTGTCTTCATTTAGGTTCTA
GTTTGAGAACCCTATTTTTTCAATGGATTTTTATTTTTACAAG