Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d014876_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:5:66769645:66776331:-1 gene:Zm00001d014876 gene_biotype:protein_coding transcript_biotype:protein_coding description:Disease resistance RPP13-like protein 4
Sequence	ATGGCCTCCAAGCTGAGTTTCAAGAGGGCAGACAGCATCGCGGAAAGCATGCCCGATGCG CTGAGGCAGAGCCGGTACCAGATGAAGAAATGCTTCCATAGGTATGTTTCCAAGGGAAGG AGGCTCTTGAAGAACCAGCAGCTCATAGAGGAGCTGGACAAATCACTGGATGACAAAGTC GAGAGGGAAAAGCTTGTTGAAGGCTTCCTGGGTTACATTATTTGTTCCACGCAGGAAGCA GTGGTGCTACCGCCCTATGTCGCATTTGCTGTCAGGATGAATCCTGGCATCTGGGAGTAT GTCAAAGTTCATTCTGATGACCTGTCGGTCGAAGGAATCACACCCTCTGAGTACCTCAAG TTCAAGGAGACATTATATGACGAGAACTGGGCCAAGGATGACAACTCACTGGAAGTCGAT TTCGGTGCTCTTGACCTCTCAACACCCCATCTGACACTGCCATCGTCCATAGGAAACGGG CTCCAGTTTGTGTCCAAATTCATGTCCTCCAAGCTGGGCGACAAGCCTGAAATTAGCATG AAGCCGTTGCTGGACTACTTGCTTTCGCTAAACTACCGTGGCGAGAAGCTGATGGTTAAC GACACCATCGATACTGTGAACAAGCTTCAGACAGCGCTGCTACTTGCGGAGGTATTTGTT AGCGGGTTGCCAAGATACACCCCATTCCTGAAGTTTGAGCAAAGGTTTCAAGAGTGGGGG TTGGAGAAGGGGTGGGGTGACAATGCTGAAAGGTGCAAAGAGACGCTGAATTGCCTCTCT GAAGTGCTACAGGCGCCAGACCCTATCAACATGGAGAAGTTCTTCAGCAGAGTTCCATCC ATATTCAACATAGTTGTCTTCTCCATCCACGGCTACTTTGGCCAAGAGAAGGTTCTTGGC TTGCCAGACACCGGTGGCCAGGTGGTCTACATCCTGGACCAAGTCAGGGCCCTTGAAGAG GAGTTGCTGCAAAGAATCAAGCTGCAGGGTCTGAACGTGACACCAAAGATTCTTGTGCTG ACTAGGCTGATACCAGATGCCAAGGGTACAAAATGCAATGTGGAGCTCGAGCCAGTTGAA AATACAAAACATTCCCACATACTTCGTGTGCCATTCAAGACTGAAAACGGCAAGGAGTTG CGCCAGTGGGTGTCCCGGTTTGACATCTACCCTTACCTAGAGAGATATGCCCAGGATTCT TGTGCCAAAATTCTTGACATTTTGGAGGGCAAGCCGGACCTGATCATCGGCAACTACACT GATGGCAACTTAGTGGCGTCCCTCATGTCAAGCAAACTAGGGGTCACTCAGGGGACAATC GCGCACGCTCTAGAGAAGACAAAGTATGAAGATTCAGATGTGAAGTGGAGAGATCTGGAT CAGAAGTACCATTTCTCCTGCCAATTCACTGCAGATATGATTGCCATGAACACTAGTGAC TTTATCATCACTAGCACATACCAAGAAATCGCTGGAAGCAAGGAGAAGCCTGGGCAGTAC GAGCACCACTACGCATTCACAATGCCGGGGCTCTGTCGCTACGCCACGGGCATCAATGTC TTCGATCCAAAGTTCAACATCGCCGCACCCGGTGCAGACCAGTCCATCTACTTCCCCTTC ACGCAGAAGCAGAAGCGGCTGACAGATTTGCACCCACAGATTGAGGAGCTGCTCTACAGC AAGCAGGACACCGGTGAACACAGAGGGTATCTGGCGGACAGAAACAAGCCTATCATCTTC TCGATGGCAAGGCTGGACAAGGTGAAGAATATCACCGGGCTAGTGGAGTGGTACGGCCAG AACAAGAAGCTGAGGGACCTGGTAAACCTTGTCGTCGTCGCGGGCCTGCTGGAAGCGTCG CAGTCCAAGGACCGGGAGGAGATTGAAGAGATCAACAGGATGCACAGCCTGATCGACAAG TATCAGCTGAAAGGACAGATTCGCTGGATCAAGGCACAGACTGACCGTGTCCGCAACGGT GAGCTGTACCGTTGCATTGCAGACACCAGGGGTGCATTTGTTCAGCCTGCACTCTATGAA GCGTTCGGGCTGACGGTCATTGAGGCGATGAACTGCGGGCTGACAACCTTTGCGACGAAC CAGGGAGGGCCAGCGGAGATCATCGTGGACGGTGTCTCCGGTTTCCACATAAACCCAACG AATGGCAGGGAGGCAAGCAACAAGATCGCCGAGTTCTTCCAGAAGTGCAAGGAAGACCCA AGCTACTGGAACAAGGTGTCCACTGCTGGGCTCCAGCGCATCTACGAGTGCTACACATGG AAGATCTATGCAACTAAAGTCCTGAACATGGGCTCGACGTATGGCTTCTGGAAGACTCTG AACAAGGAGGAGAGAGTGGCCAAGCAGCGCTACCTGCAGATGTTCTACAACCTCCAGTTC AGGAACCTGGCAAAGACTGTCCCAAGGCTGTTTGAACATCCTCCTCCGCAAGCCCCAGCA GGCGCAGGGCCTAGTACGATGACGGTAACGAGGCCGAAAGAAAGGCAAGTGTGCCCACTC TTAAGAACTTTACTGAAGAGAGACCGCGGGAGCAACTGA

Peptide Sequence

PEP ID	Zm00001d014876_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:5:66769645:66776331:-1 gene:Zm00001d014876 transcript:Zm00001d014876_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Disease resistance RPP13-like protein 4
Sequence	MASKLSFKRADSIAESMPDALRQSRYQMKKCFHRYVSKGRRLLKNQQLIEELDKSLDDKV EREKLVEGFLGYIICSTQEAVVLPPYVAFAVRMNPGIWEYVKVHSDDLSVEGITPSEYLK FKETLYDENWAKDDNSLEVDFGALDLSTPHLTLPSSIGNGLQFVSKFMSSKLGDKPEISM KPLLDYLLSLNYRGEKLMVNDTIDTVNKLQTALLLAEVFVSGLPRYTPFLKFEQRFQEWG LEKGWGDNAERCKETLNCLSEVLQAPDPINMEKFFSRVPSIFNIVVFSIHGYFGQEKVLG LPDTGGQVVYILDQVRALEEELLQRIKLQGLNVTPKILVLTRLIPDAKGTKCNVELEPVE NTKHSHILRVPFKTENGKELRQWVSRFDIYPYLERYAQDSCAKILDILEGKPDLIIGNYT DGNLVASLMSSKLGVTQGTIAHALEKTKYEDSDVKWRDLDQKYHFSCQFTADMIAMNTSD FIITSTYQEIAGSKEKPGQYEHHYAFTMPGLCRYATGINVFDPKFNIAAPGADQSIYFPF TQKQKRLTDLHPQIEELLYSKQDTGEHRGYLADRNKPIIFSMARLDKVKNITGLVEWYGQ NKKLRDLVNLVVVAGLLEASQSKDREEIEEINRMHSLIDKYQLKGQIRWIKAQTDRVRNG ELYRCIADTRGAFVQPALYEAFGLTVIEAMNCGLTTFATNQGGPAEIIVDGVSGFHINPT NGREASNKIAEFFQKCKEDPSYWNKVSTAGLQRIYECYTWKIYATKVLNMGSTYGFWKTL NKEERVAKQRYLQMFYNLQFRNLAKTVPRLFEHPPPQAPAGAGPSTMTVTRPKERQVCPL LRTLLKRDRGSN

Transcript Sequence

Transcript ID	Zm00001d014876_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:66769645:66776331:-1 gene:Zm00001d014876 gene_biotype:protein_coding transcript_biotype:protein_coding description:Disease resistance RPP13-like protein 4
Sequence	AGCAATGGCCAATGCAGAGGAGATGAGTCAACCAAAGCTAGTGAAAAGATATGGAATGAG CTCACCCCACCCCAGAGCATCAAGAAGCTGGTAATCAAGAACTACAAAGGCGTAAAGTTT CCAAAATGGATAAAAGGTCCCAAGCTAGGAGACTCCTTCCCCAGCCTTGTGTTTTTGGAT CTTGAAAACTGCATGTCATGTACTAAACTGCCTTCACTTGGCCTCCTGAGTCAACTCCAG TCCCTGCAAATCTCAAATGCAGACTCAGTCATCACCATCGGTTCAGAATTCCTTGGGACC ACTGTACTTTCATCAGCCACTCCATTCCCCAAGCTTGAGGTTTTAAAGCTCAGAAACATG AAGAAACTTGAAGAGTGGTCTTTAACTGTGGAGGAGAGCCAGGTAGTATTACCTTGTTTG AAGTCACTGCAGATACAGTGGTGTCCTAAACTGAAAGCTCTACCAGAAGGCCTGAAGCAT GTAGCGCTGTGTGAACTTCATGTGGAGGGTGCACATAGCCTAACTGAAATCAAGGACCTG CCAAAACTATCTGACGAGCTCCATCTCAAAGATAATAAGGTGCTACAGAGGATCTCCAAC CTGCCCATGCTTCGTTCCCTCATTATCGATGACTGCTCAAAGTTGAAGCATGTGGCAGGT CTTGATGCGCTGCAGCACCTCAGACTTGTCTTTCCTCCGTCCACCGAGACATTTTATTTC GAAGAGCTAGTAATTTTCTGGAGCGTTGCCTTCCCACGGTGGCTGGAGCTACTGATTCAG AAGTGCAAAGGCCTGCGACGGTTTGAGTTGCAGTGTGGTCTGTCATTGCTCAGGAGCTGC CTCGACGGTGGCAAGAACTGGCATCTCGTGCAGCAGATCCCCGAGGTGCGCATCATAAGC TGCGATGGCAAGAGATACTTTCGGTATAACAAGAGCCGCCGCATCTACGAAACTAATGCA CAGTCAGAAGAATGAAGCCATTTCTGAAAACCTTGGCACGACACTGGTTTGTTTTGGGTC AGCCACACGTTTCAGTTGTCGCTGTCCCTACTTTGTTCCGGGAGTATTGAGAGCTTGTGT TCTGTTCACGATTGATTCAGGTGTTTTCCTTTGTTTTGCGTGTTTTTTTTCTTCTTCTTT TTATCGCTGAGCCGATATATATGCACTGGTTCTCCTCTGAATATGGGTGTCCTTCACCAG GACTCAATATGTGTAATTCTTTTCTGTTTCCTGGTCATGATTGTCTGTAAATTGTAAACA TTGGGTTTGATGGATATCGACACTGGAGTGTAAAGTGTTGGCGGTTAAATACACGGCCCT CTTTCCTGGCTCAGCAATGAAACTTCTGTTCTACAGTTACCTAGTCAACGTGAATGCTGC GAGTAGTATATGCAAGACAACACGCTTTGCACTTGATACACCTCACTGTGCCCCTAATCT GCAGAAAGTCGGATTAAAGTTCTTAAAGTTACAGCATGACAGCTGCGACAAGAACTTTAG CCAAATTATGTATAAAATGGAGAGGTCATGTTCAATTGAAATCCACCCAAACCTTGAATC CAGCTAATGAAAATCTGGGGTCAAATCAGAGTCCATGTGTTTGGTTGCCTGTATTTGCTG GTGCTTGCATCGCGGGATGCAATGAGCTGGTGTTTAATTGTTATCAATCAGGCTCTACGC GTGCGAGGTGTGTGTTTGGTTACCTGTGTACAGATGTGAAGTCAGACTCGCACGATACTT AAAGCATCTTGGGTCAGGCTCTACAGGCGCGAGCAAATTATTTGCATATCTGGAGCCAGG CTCCTGCTAACCTGGCTCATGCAGTCGGGCTGCCGGGAGAAGCCAACCAATCACACGGAG TGTGTACGCTGTGGTCAGGATGAGTACGTTGTCATATGTAGTAAAGTTATACTGCAGAAA TCTGAAATCTTTGACTGATAGTGTTCCAACAAGGAGGTTAAATTGTGATTTCTTGTAACC TTAATAAACACAAATCCCTTTCCCTTTTTAGTGCCATATGTTCAAACGGAGAAGTCATGG TAAGAAATCCATGTAAGGATTAAGGGAATCTTGCAGGTCAGGGATGTGTTCGTTGGTTTT CATGCCTTTCTTGCCTTGGATGTTTCTTCAGCATAAGTTCTCCCAACCCAAGCAAATCAA TGTGCTTTCTCCCCTGCGCGCCATCTCCCATTTAATTTTCCAGCTGGCGTCCACACAAAG AAAACTCTGCCAGTAGGCCAAAGTTTTGTTTCATCACGCTCCCTTCCTTCTATAAATTGT TGCCCATGGACATTCAGACCCAGCCAGTCACAGCATTCTTCTTCCTCCGCACATAAACCA TAACATTCTTCTCCACCTTGTTTCTTTCCAAGCCACCATGGCCTCCAAGCTGAGTTTCAA GAGGGCAGACAGCATCGCGGAAAGCATGCCCGATGCGCTGAGGCAGAGCCGGTACCAGAT GAAGAAATGCTTCCATAGGTATGTTTCCAAGGGAAGGAGGCTCTTGAAGAACCAGCAGCT CATAGAGGAGCTGGACAAATCACTGGATGACAAAGTCGAGAGGGAAAAGCTTGTTGAAGG CTTCCTGGGTTACATTATTTGTTCCACGCAGGAAGCAGTGGTGCTACCGCCCTATGTCGC ATTTGCTGTCAGGATGAATCCTGGCATCTGGGAGTATGTCAAAGTTCATTCTGATGACCT GTCGGTCGAAGGAATCACACCCTCTGAGTACCTCAAGTTCAAGGAGACATTATATGACGA GAACTGGGCCAAGGATGACAACTCACTGGAAGTCGATTTCGGTGCTCTTGACCTCTCAAC ACCCCATCTGACACTGCCATCGTCCATAGGAAACGGGCTCCAGTTTGTGTCCAAATTCAT GTCCTCCAAGCTGGGCGACAAGCCTGAAATTAGCATGAAGCCGTTGCTGGACTACTTGCT TTCGCTAAACTACCGTGGCGAGAAGCTGATGGTTAACGACACCATCGATACTGTGAACAA GCTTCAGACAGCGCTGCTACTTGCGGAGGTATTTGTTAGCGGGTTGCCAAGATACACCCC ATTCCTGAAGTTTGAGCAAAGGTTTCAAGAGTGGGGGTTGGAGAAGGGGTGGGGTGACAA TGCTGAAAGGTGCAAAGAGACGCTGAATTGCCTCTCTGAAGTGCTACAGGCGCCAGACCC TATCAACATGGAGAAGTTCTTCAGCAGAGTTCCATCCATATTCAACATAGTTGTCTTCTC CATCCACGGCTACTTTGGCCAAGAGAAGGTTCTTGGCTTGCCAGACACCGGTGGCCAGGT GGTCTACATCCTGGACCAAGTCAGGGCCCTTGAAGAGGAGTTGCTGCAAAGAATCAAGCT GCAGGGTCTGAACGTGACACCAAAGATTCTTGTGCTGACTAGGCTGATACCAGATGCCAA GGGTACAAAATGCAATGTGGAGCTCGAGCCAGTTGAAAATACAAAACATTCCCACATACT TCGTGTGCCATTCAAGACTGAAAACGGCAAGGAGTTGCGCCAGTGGGTGTCCCGGTTTGA CATCTACCCTTACCTAGAGAGATATGCCCAGGATTCTTGTGCCAAAATTCTTGACATTTT GGAGGGCAAGCCGGACCTGATCATCGGCAACTACACTGATGGCAACTTAGTGGCGTCCCT CATGTCAAGCAAACTAGGGGTCACTCAGGGGACAATCGCGCACGCTCTAGAGAAGACAAA GTATGAAGATTCAGATGTGAAGTGGAGAGATCTGGATCAGAAGTACCATTTCTCCTGCCA ATTCACTGCAGATATGATTGCCATGAACACTAGTGACTTTATCATCACTAGCACATACCA AGAAATCGCTGGAAGCAAGGAGAAGCCTGGGCAGTACGAGCACCACTACGCATTCACAAT GCCGGGGCTCTGTCGCTACGCCACGGGCATCAATGTCTTCGATCCAAAGTTCAACATCGC CGCACCCGGTGCAGACCAGTCCATCTACTTCCCCTTCACGCAGAAGCAGAAGCGGCTGAC AGATTTGCACCCACAGATTGAGGAGCTGCTCTACAGCAAGCAGGACACCGGTGAACACAG AGGGTATCTGGCGGACAGAAACAAGCCTATCATCTTCTCGATGGCAAGGCTGGACAAGGT GAAGAATATCACCGGGCTAGTGGAGTGGTACGGCCAGAACAAGAAGCTGAGGGACCTGGT AAACCTTGTCGTCGTCGCGGGCCTGCTGGAAGCGTCGCAGTCCAAGGACCGGGAGGAGAT TGAAGAGATCAACAGGATGCACAGCCTGATCGACAAGTATCAGCTGAAAGGACAGATTCG CTGGATCAAGGCACAGACTGACCGTGTCCGCAACGGTGAGCTGTACCGTTGCATTGCAGA CACCAGGGGTGCATTTGTTCAGCCTGCACTCTATGAAGCGTTCGGGCTGACGGTCATTGA GGCGATGAACTGCGGGCTGACAACCTTTGCGACGAACCAGGGAGGGCCAGCGGAGATCAT CGTGGACGGTGTCTCCGGTTTCCACATAAACCCAACGAATGGCAGGGAGGCAAGCAACAA GATCGCCGAGTTCTTCCAGAAGTGCAAGGAAGACCCAAGCTACTGGAACAAGGTGTCCAC TGCTGGGCTCCAGCGCATCTACGAGTGCTACACATGGAAGATCTATGCAACTAAAGTCCT GAACATGGGCTCGACGTATGGCTTCTGGAAGACTCTGAACAAGGAGGAGAGAGTGGCCAA GCAGCGCTACCTGCAGATGTTCTACAACCTCCAGTTCAGGAACCTGGCAAAGACTGTCCC AAGGCTGTTTGAACATCCTCCTCCGCAAGCCCCAGCAGGCGCAGGGCCTAGTACGATGAC GGTAACGAGGCCGAAAGAAAGGCAAGTGTGCCCACTCTTAAGAACTTTACTGAAGAGAGA CCGCGGGAGCAACTGACTGACCAATTCGTTGTTTCACAATCCCAAATCTGGTTGCTGCAG AAAGACACAGACTAGGATCCAGAGGATCATGACCAGCTTGATGGGGCAGAAGCCTGCTAC TTCTGAATAATAATAATACATTAGAGCCAGGGAGACGAGATGGGTGTGCATGCGTGATCT CCTCAAGCCAAGGTCCTGGCGGCTGCACATATATTCATTCATTCCATTGAGACCGGACCA GATCAGTGTTTATTGTGAAATTTGTTGTGGTGTTGCATGTGTGGTTTTCATCTGTGTACT GTTGATTGGAGAGCTGGATGATGTAAAGAGAGTGAAAGTGCACATGGTTACAATTGATAA TAATAATTTATGACAAGGATTG