Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d014853_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:5:65591902:65593275:-1 gene:Zm00001d014853 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA-splicing endonuclease subunit Sen2-2
Sequence	ATGAAGGGGGGCAAATCCAATGCAGCAGGCAGGAGCTTAGGAGAGGAGACGCCGACGGAA GATTGCGGGGCGGACACCATGCAGCGGAAGATCTGCGGAGTACGGATTCCCATCAAGGTC TCATATGTCGTGTGCCATCAGCTTATGGATTTGCCAGGTCCCAGATGGAAGAAGGGCAAG GACTGCAAGGGCTTTGCAGCACTGGCAGCAGCCAATCCCATGTCCAGCATAGTTGCGGAG CTCCAGGCTTCACTGCGGGACTCGGAAGCCGTGGCGATTCTAGCCGCGCACGCCAGGGAC GCGATCCTCGAGGTCGGCCCACGCCAAGCCGCGCTTCTGAACGGCGCTGCCTTCGGCAGG GCCGTGGAGGGTGCAGGTGCAGAGAGCCAGTGGTTCCAGCTGGGCCCCGAGGAAGTGTTC TTCCTTTGCCATGCCCTGAAGTGCCTCAGGGTTGAGTCGAATAACAAGACGCGGATTGGT GCGCCCGAGCTGTGGGGTCTCTTGGCCTCCGGCTCAGAGCAATTCCCGGAGATGTACAGG GCGTATCAATACCTCAGGCTGAAGAACTGGGTTGTAAGGTCGGGACTGCAGTACGGGGCA GACTTTGTTGCTTACCGTCATCATCCGGCACTTGTGCACTCGGAGTTCACGGTGGTTGTG GCTCCAGAAGGGAAAGCATTCGGCACCAGGTGTGCCCGCATGGAGGTCTGGTCTGAAGTA CTCTGTGCGCTTCGGGCCTCTGGAAGTGTGGCCAAGACGTTACTTGTTCTTACCATCAGC ACCAAGAGCTGCGAGCTGGGATCCTTGGATTGTTTGGAGCAGATGATTGTTCATGAGAGG ACGATCACGAGATGGATACCACAGCAGTGCAGTGAGCAACAAGACAAACCATGTAGAGAA GAAACCAACAGGGATGGACAAAGACAAAAATCTTGCATAGAAGTATCAAGCAACGAAGAA CAAGAGCATACAAGTGGGGGTGTAGTGTTTAGCTATTGGCCCGTAGTGCTAAGCTATACA ATTCTTTTCAGTGTACTTGTCTACAAGCTGAAATCTTAA

Peptide Sequence

PEP ID	Zm00001d014853_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:5:65591902:65593275:-1 gene:Zm00001d014853 transcript:Zm00001d014853_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA-splicing endonuclease subunit Sen2-2
Sequence	MKGGKSNAAGRSLGEETPTEDCGADTMQRKICGVRIPIKVSYVVCHQLMDLPGPRWKKGK DCKGFAALAAANPMSSIVAELQASLRDSEAVAILAAHARDAILEVGPRQAALLNGAAFGR AVEGAGAESQWFQLGPEEVFFLCHALKCLRVESNNKTRIGAPELWGLLASGSEQFPEMYR AYQYLRLKNWVVRSGLQYGADFVAYRHHPALVHSEFTVVVAPEGKAFGTRCARMEVWSEV LCALRASGSVAKTLLVLTISTKSCELGSLDCLEQMIVHERTITRWIPQQCSEQQDKPCRE ETNRDGQRQKSCIEVSSNEEQEHTSGGVVFSYWPVVLSYTILFSVLVYKLKS

Transcript Sequence

Transcript ID	Zm00001d014853_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:65591902:65593275:-1 gene:Zm00001d014853 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA-splicing endonuclease subunit Sen2-2
Sequence	GCGCGGGCAGAATCGCTGATACGCCCTTGGGCCACGCCTTCCTTCGTATCCCGTGCGCCT GCCCTGCCCTCCTGCAGCGCCCGTCGCCTCCCTTTCCCCTTCCCTCCCTCTCCCCGCGAG CCGCCAGAGGCAATTTCTCCCTCGATTCGACCCCGATTCGTCCGCCCGCGACCGGGATTC CCTCCGCCAAGCGCGGATCTGAACGCTGCGCTCCGTGTCGCCGCTCGAATCCGCCATGAA GGGGGGCAAATCCAATGCAGCAGGCAGGAGCTTAGGAGAGGAGACGCCGACGGAAGATTG CGGGGCGGACACCATGCAGCGGAAGATCTGCGGAGTACGGATTCCCATCAAGGTCTCATA TGTCGTGTGCCATCAGCTTATGGATTTGCCAGGTCCCAGATGGAAGAAGGGCAAGGACTG CAAGGGCTTTGCAGCACTGGCAGCAGCCAATCCCATGTCCAGCATAGTTGCGGAGCTCCA GGCTTCACTGCGGGACTCGGAAGCCGTGGCGATTCTAGCCGCGCACGCCAGGGACGCGAT CCTCGAGGTCGGCCCACGCCAAGCCGCGCTTCTGAACGGCGCTGCCTTCGGCAGGGCCGT GGAGGGTGCAGGTGCAGAGAGCCAGTGGTTCCAGCTGGGCCCCGAGGAAGTGTTCTTCCT TTGCCATGCCCTGAAGTGCCTCAGGGTTGAGTCGAATAACAAGACGCGGATTGGTGCGCC CGAGCTGTGGGGTCTCTTGGCCTCCGGCTCAGAGCAATTCCCGGAGATGTACAGGGCGTA TCAATACCTCAGGCTGAAGAACTGGGTTGTAAGGTCGGGACTGCAGTACGGGGCAGACTT TGTTGCTTACCGTCATCATCCGGCACTTGTGCACTCGGAGTTCACGGTGGTTGTGGCTCC AGAAGGGAAAGCATTCGGCACCAGGTGTGCCCGCATGGAGGTCTGGTCTGAAGTACTCTG TGCGCTTCGGGCCTCTGGAAGTGTGGCCAAGACGTTACTTGTTCTTACCATCAGCACCAA GAGCTGCGAGCTGGGATCCTTGGATTGTTTGGAGCAGATGATTGTTCATGAGAGGACGAT CACGAGATGGATACCACAGCAGTGCAGTGAGCAACAAGACAAACCATGTAGAGAAGAAAC CAACAGGGATGGACAAAGACAAAAATCTTGCATAGAAGTATCAAGCAACGAAGAACAAGA GCATACAAGTGGGGGTGTAGTGTTTAGCTATTGGCCCGTAGTGCTAAGCTATACAATTCT TTTCAGTGTACTTGTCTACAAGCTGAAATCTTAA