Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d014797_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:5:63623077:63627259:-1 gene:Zm00001d014797 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 48
Sequence	ATGCTAGTGACATTGATGAACTTGTTACGGGCGTGCTGGCGACCGTCATCGAACCGGCAT GCCCGAACAGGCTCAGATGTTACCGGTAGGCAGGATGGACTTCTATGGTACAAGGACGCC GGGCAGCATGTCAACGGGGAGTTTTCCATGGCTGTTGTTCAGGCCAATAACTTACTTGAG GACCAGTGTCAGATTGAGTCGGGCCCACTGAGTTTTCTAGATTCCGGACCATATGGCACT TTTGTTGGCGTTTACGATGGACATGGTGGTCCAGAGACGGCCTGCTATATCAATGATCAT CTCTTCCAGAATCTGAAAAGGTTTGCATCTGAGCAGAATACAATGTCTGCTGATGTACTG AAGAAGGCGTATGAAGCTACAGAAGATGGATTCTTTTCTGTTGTTACCAAACAATGGCCT GTAAAGCCTCAGATAGCAGCTGTCGGCTCATGCTGCCTGGTCGGTGTAATTTGTGGTGGC ATGCTTTATGTTGCCAATGTTGGGGATTCCCGTGTTGTTTTAGGAAGACATGTTAAGGCT ACTGGAGAAGTTTTGGCTGTCCAACTGTCAGCAGAGCATAATGTAAGTATTGAGTCAGTG AGAAAAGAACTGCAGTCAATGCACCCAGAAGATAGGCACATTGTTGTTCTCAAGCACAAT GTTTGGCGTGTAAAAGGACTAATTCAGGTTTGTAGATCAATCGGTGATGCTTATCTCAAG AAGCAAGAGTTCAATAGGGAACCCCTATATGTGAAATTTCGGCTTCGTGAACCTTTTCAC AAGCCGATACTAAGTTCAGAACCATCGATCAATGTGCAACCACTACAACCACACGACCAG TTTCTCATATTTGCATCTGATGGACTTTGGGAGCACTTAACCAACCAAGAAGCTGTTGAT ATTGTTCACAGTAGCCCCCGCAGTGGCTGTGCTAGGAGGCTGATAAGAGCGGCGCTGCAA GTGGCAGCCAAGAAAAGGGAGATGAGGTACTCAGACCTCAAGAAGATCGACCGCGGTGTT CGCCGCCACTTCCACGACGACATAACAGTCATAGTAGTGTTCCTTGATTCCAGCCTCGTG AGCAAGGCGAGCACGCACCGAGGCCCCACTCTTTCCCTGCGAGGCGGCGGTGCCAGCGCT GGTCTGCGCAGCAACACGCTTGCACCAACGTCAATGTGGCTATGA

Peptide Sequence

PEP ID	Zm00001d014797_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:5:63623077:63627259:-1 gene:Zm00001d014797 transcript:Zm00001d014797_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 48
Sequence	MLVTLMNLLRACWRPSSNRHARTGSDVTGRQDGLLWYKDAGQHVNGEFSMAVVQANNLLE DQCQIESGPLSFLDSGPYGTFVGVYDGHGGPETACYINDHLFQNLKRFASEQNTMSADVL KKAYEATEDGFFSVVTKQWPVKPQIAAVGSCCLVGVICGGMLYVANVGDSRVVLGRHVKA TGEVLAVQLSAEHNVSIESVRKELQSMHPEDRHIVVLKHNVWRVKGLIQVCRSIGDAYLK KQEFNREPLYVKFRLREPFHKPILSSEPSINVQPLQPHDQFLIFASDGLWEHLTNQEAVD IVHSSPRSGCARRLIRAALQVAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSSLV SKASTHRGPTLSLRGGGASAGLRSNTLAPTSMWL

Transcript Sequence

Transcript ID	Zm00001d014797_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:63623077:63627259:-1 gene:Zm00001d014797 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 48
Sequence	AGACCCAGAAGGAGAGGGAGACAGAGGAGAGGAGGAGCAGCGTGGCGACGCCCAAATCGA GCGACCTGATCGAGGCCCCTCGCCCCAACTCGCTGAATCCCAATCCGAGCCCGCCAATTG GGCGCCCCGCCCACGCCAAGATGAAGCGAGCTCGAAGGCGTATGTGCAAGAGATGACTGA TGAGGGATGCTAGTGACATTGATGAACTTGTTACGGGCGTGCTGGCGACCGTCATCGAAC CGGCATGCCCGAACAGGCTCAGATGTTACCGGTAGGCAGGATGGACTTCTATGGTACAAG GACGCCGGGCAGCATGTCAACGGGGAGTTTTCCATGGCTGTTGTTCAGGCCAATAACTTA CTTGAGGACCAGTGTCAGATTGAGTCGGGCCCACTGAGTTTTCTAGATTCCGGACCATAT GGCACTTTTGTTGGCGTTTACGATGGACATGGTGGTCCAGAGACGGCCTGCTATATCAAT GATCATCTCTTCCAGAATCTGAAAAGGTTTGCATCTGAGCAGAATACAATGTCTGCTGAT GTACTGAAGAAGGCGTATGAAGCTACAGAAGATGGATTCTTTTCTGTTGTTACCAAACAA TGGCCTGTAAAGCCTCAGATAGCAGCTGTCGGCTCATGCTGCCTGGTCGGTGTAATTTGT GGTGGCATGCTTTATGTTGCCAATGTTGGGGATTCCCGTGTTGTTTTAGGAAGACATGTT AAGGCTACTGGAGAAGTTTTGGCTGTCCAACTGTCAGCAGAGCATAATGTAAGTATTGAG TCAGTGAGAAAAGAACTGCAGTCAATGCACCCAGAAGATAGGCACATTGTTGTTCTCAAG CACAATGTTTGGCGTGTAAAAGGACTAATTCAGGTTTGTAGATCAATCGGTGATGCTTAT CTCAAGAAGCAAGAGTTCAATAGGGAACCCCTATATGTGAAATTTCGGCTTCGTGAACCT TTTCACAAGCCGATACTAAGTTCAGAACCATCGATCAATGTGCAACCACTACAACCACAC GACCAGTTTCTCATATTTGCATCTGATGGACTTTGGGAGCACTTAACCAACCAAGAAGCT GTTGATATTGTTCACAGTAGCCCCCGCAGTGGCTGTGCTAGGAGGCTGATAAGAGCGGCG CTGCAAGTGGCAGCCAAGAAAAGGGAGATGAGGTACTCAGACCTCAAGAAGATCGACCGC GGTGTTCGCCGCCACTTCCACGACGACATAACAGTCATAGTAGTGTTCCTTGATTCCAGC CTCGTGAGCAAGGCGAGCACGCACCGAGGCCCCACTCTTTCCCTGCGAGGCGGCGGTGCC AGCGCTGGTCTGCGCAGCAACACGCTTGCACCAACGTCAATGTGGCTATGAGGAGGCTAC ACCCTGACTGGAGGACGTTTTCTTTCCTCGTGTCGAATGTGTTATATATGTACTTGTACC GGCCAAGGTCATCCATCTCCCCTCAATGGTGTAAAGAACTAGGAGAGGCGTGGAAGCTCC TCTCCAGCGTCTTTGAATCCCCTCAATGGTGTCAAGGTGTGGACTCAAGTCAATAGCTTC GCTGTTCTGATGATGCTCTGTGGAAACTCGAATCCTTCCACCTGAAAACCAAGTAGTATG TCTTCTAGTGCTGGAATTAACCCTAGTGCATATATACATATGAAATAAAAAAAAGCCAAA AGGAGGAGTAACTTATTTAACTGATGCTGTGAGGTGTATGTATGT