Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014793_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:63456839:63460120:1 gene:Zm00001d014793 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:thick tassel dwarf1 description: thick tassel dwarf1
Sequence

ATGCCTCCTCCCACCTTCCTCCTCGGCCTCCTCCTCCTCCTCCTCCTCGCCGCCGCCGCC
CCCGCCCCCGCCTCCGCCACGCCGGAGCGGGACGCGTACGCGCTGTCGAGGCTCAAGGCG
TCGCTCGTCCCGTCCGCCACAAACTCCACCTCGGCACCGCTGTCCGACTGGGACCCGGCC
GCGACCCCGCCGGCGCACTGCGCGTTCACGGGCGTGACCTGCGACGCCGCCACGTCGCGC
GTCGTCGCGATCAACCTCACGGCCGTGCCGCTCCACGGGGGCGCGCTCCCGCCCGAGGTC
GCGCTGCTGGACGCGCTCGCCAGCCTCACCGTCGCCAACTGCTATCTCCGCGGCCGCCTC
CCGCCCGCGCTCGCGTCCATGCCCGCGCTCCGCCACCTCAACCTCTCCAACAACAACCTC
AGCGGGCCCTTCCCGCCGCCGCCCCCCGCCGCCTACTTCCCGGCGCTCGAGATCGTCGAC
GTCTACAACAACAACCTGTCCGGCCCGCTCCCGCCGCTGGGCGCGCCGCACGCGCGCTCC
CTCCGCTACCTCCACCTCGGCGGGAACTACTTCAACGGCTCCATCCCGGACACCTTCGGC
GACCTCGCCGCGCTCGAGTACCTGGGCCTCAACGGCAACGCGCTGTCGGGCCGGGTCCCG
CCCTCGCTCTCCCGCCTCTCCCGCCTCCGGGAGATGTACGTCGGATACTACAACCAGTAC
AGCGGCGGGGTCCCGCGCGAGTTCGGCGCGCTCCAGTCGCTCGTCCGCCTCGACATGAGC
AGCTGCACGCTCACGGGGCCCATCCCGCCGGAGCTCGCGCGGCTGTCCCGCCTCGACACG
CTCTTCCTCGCCTTGAACCAGCTCACGGGGGAGATACCGCCGGAGCTCGGCGCTCTCACC
AGCCTTCGGTCGCTCGACCTCTCCATCAATGACCTCGCCGGCGAGATACCCGCCAGCTTC
GCCGCTCTCACCAACCTCAAGCTGCTCAACCTCTTCCGGAACCACCTCCGCGGCGAGATA
CCGGCCTTCCTCGGCGACTTCCCTTTCCTCGAGGTGCTGCAGGTGTGGGACAACAACCTC
ACAGGCCCCCTCCCGCCCGCGCTCGGCAGGAACGGCCGCCTCAAGACGCTGGACGTCACC
AGTAACCACCTCACCGGCACCATACCGCCGGACCTCTGCGCCGGACGGAACCTGCAGCTG
CTCGTGCTCATGGACAACGGCTTCTTCGGCAGCATCCCCGAGTCGCTCGGCGACTGCAAG
ACGCTCACGCGCGTCCGCCTCGGCAAGAACTTCCTGACCGGCCCCGTCCCGGCCGGGCTC
TTCGACCTTCCCCAGGCGAACATGCTCGAGCTCACCGACAACATGCTCACCGGCGAGCTC
CCGGACGTGATCGCTGGAGACAAGATCGGCATGCTCATGCTGGGGAACAATCGCATCGGA
GGGCGCATCCCCGCCGCTATCGGCAACCTCCCCGCGCTGCAGACGCTGTCCCTGGAGTCG
AACAACTTCTCTGGCCCGCTGCCTCCGGAGATCGGCAGGCTCAGGAACCTCACCAGGCTC
AACGCCAGCGGCAACGCGCTCACGGGAGGCATCCCGAGGGAGCTCATGGGCTGCGCCTCC
CTGGGCGCCGTCGACCTCAGCCGGAACGGCCTCACCGGCGAGATACCGGACACCGTGACG
TCGCTCAAGATCCTGTGCACGCTCAACGTGTCGAGGAACAGGCTGTCGGGCGAGCTGCCG
GCGGCGATGGCCAACATGACGAGCCTGACGACGCTGGACGTGTCCTACAACCAGCTGTCG
GGCCCCGTGCCGATGCAGGGCCAGTTCCTGGTGTTCAACGAGAGCTCGTTCGTGGGCAAC
CCGGGGCTGTGCAGCGCGTGCCCCCCATCGTCCGGCGGCGCGCGGTCGCCCTTCTCGCTG
CGCCGGTGGGACTCGAAGAAGCTGCTGGTGTGGCTGGTCGTTCTCCTCACCCTGCTGGTC
CTGGCGGTCCTGGGCGCGCGGAAGGCGCACGAGGCGTGGCGCGAGGCGGCGCGGCGGCGG
TCGGGGGCCTGGAAGATGACGGCGTTCCAGAAGCTGGACTTCTCGGCGGACGACGTGGTG
GAGTGTCTCAAGGAGGACAACATCATCGGCAAGGGCGGCGCCGGGATCGTGTACCACGGC
GTGACCCGCGGCGGCGCGGAGCTGGCGATCAAGCGGCTGGTGGGGAGAGGGTGCGGCGAC
CACGACCGCGGGTTCACCGCAGAGGTCACCACGCTGGGCCGCATCCGGCACCGCAACATC
GTGCGCCTGCTCGGCTTCGTCTCCAACCGGGAGGCCAACCTGCTGCTGTACGAGTACATG
CCCAACGGGTCGCTAGGCGAGATGCTGCACGGCGGCAAGGGGGGCCACCTCGGGTGGGAG
GCCCGGGCGCGCGTTGCGGCGGAGGCGGCGCGCGGGCTCTGCTACCTGCACCACGACTGC
GCGCCCCGGATCATCCACCGCGACGTCAAGTCCAACAACATCCTCCTCGACTCCGCCTTC
GAGGCGCACGTCGCGGACTTTGGCCTCGCCAAGTTCCTCGGCGGCGGCGGCGCCACGTCC
GAGTGCATGTCTGCCATCGCCGGCTCCTACGGCTACATCGCCCCAGAGTACGCGTACACC
CTTCGCGTGGACGAGAAGAGTGACGTGTACAGCTTCGGCGTGGTGCTGCTGGAGCTCATC
ACGGGGCGGCGCCCCGTGGGCAGCTTCGGCGACGGCGTGGACATCGTGCACTGGGTGCGC
AAGGTGACCGCGGACGCCGCCGCCGCGGAGGAGCCCGTCCTGCTGGTGGCGGACCGTCGG
CTGGCGCCGGAGCCGGTGCCGCTGCTGGCGGACCTCTACAGGGTGGCCATGGCGTGCGTG
GAGGAGGCCAGCACGGCCCGGCCCACCATGCGCGAGGTCGTGCACATGCTCTCCACCTCC
GCCGCGGCCCAGCCCGACGTCCCCCACGCCTTGTGCAAGGTCGTCGATTAA

Peptide Sequence

PEP ID

Zm00001d014793_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:63456839:63460120:1 gene:Zm00001d014793 transcript:Zm00001d014793_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:thick tassel dwarf1 description: thick tassel dwarf1
Sequence

MPPPTFLLGLLLLLLLAAAAPAPASATPERDAYALSRLKASLVPSATNSTSAPLSDWDPA
ATPPAHCAFTGVTCDAATSRVVAINLTAVPLHGGALPPEVALLDALASLTVANCYLRGRL
PPALASMPALRHLNLSNNNLSGPFPPPPPAAYFPALEIVDVYNNNLSGPLPPLGAPHARS
LRYLHLGGNYFNGSIPDTFGDLAALEYLGLNGNALSGRVPPSLSRLSRLREMYVGYYNQY
SGGVPREFGALQSLVRLDMSSCTLTGPIPPELARLSRLDTLFLALNQLTGEIPPELGALT
SLRSLDLSINDLAGEIPASFAALTNLKLLNLFRNHLRGEIPAFLGDFPFLEVLQVWDNNL
TGPLPPALGRNGRLKTLDVTSNHLTGTIPPDLCAGRNLQLLVLMDNGFFGSIPESLGDCK
TLTRVRLGKNFLTGPVPAGLFDLPQANMLELTDNMLTGELPDVIAGDKIGMLMLGNNRIG
GRIPAAIGNLPALQTLSLESNNFSGPLPPEIGRLRNLTRLNASGNALTGGIPRELMGCAS
LGAVDLSRNGLTGEIPDTVTSLKILCTLNVSRNRLSGELPAAMANMTSLTTLDVSYNQLS
GPVPMQGQFLVFNESSFVGNPGLCSACPPSSGGARSPFSLRRWDSKKLLVWLVVLLTLLV
LAVLGARKAHEAWREAARRRSGAWKMTAFQKLDFSADDVVECLKEDNIIGKGGAGIVYHG
VTRGGAELAIKRLVGRGCGDHDRGFTAEVTTLGRIRHRNIVRLLGFVSNREANLLLYEYM
PNGSLGEMLHGGKGGHLGWEARARVAAEAARGLCYLHHDCAPRIIHRDVKSNNILLDSAF
EAHVADFGLAKFLGGGGATSECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELI
TGRRPVGSFGDGVDIVHWVRKVTADAAAAEEPVLLVADRRLAPEPVPLLADLYRVAMACV
EEASTARPTMREVVHMLSTSAAAQPDVPHALCKVVD

Transcript Sequence

Transcript ID

Zm00001d014793_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:63456839:63460120:1 gene:Zm00001d014793 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:thick tassel dwarf1 description: thick tassel dwarf1
Sequence

GCCACCACACCACAACGCCACAATCACAATGCCTCCTCCCACCTTCCTCCTCGGCCTCCT
CCTCCTCCTCCTCCTCGCCGCCGCCGCCCCCGCCCCCGCCTCCGCCACGCCGGAGCGGGA
CGCGTACGCGCTGTCGAGGCTCAAGGCGTCGCTCGTCCCGTCCGCCACAAACTCCACCTC
GGCACCGCTGTCCGACTGGGACCCGGCCGCGACCCCGCCGGCGCACTGCGCGTTCACGGG
CGTGACCTGCGACGCCGCCACGTCGCGCGTCGTCGCGATCAACCTCACGGCCGTGCCGCT
CCACGGGGGCGCGCTCCCGCCCGAGGTCGCGCTGCTGGACGCGCTCGCCAGCCTCACCGT
CGCCAACTGCTATCTCCGCGGCCGCCTCCCGCCCGCGCTCGCGTCCATGCCCGCGCTCCG
CCACCTCAACCTCTCCAACAACAACCTCAGCGGGCCCTTCCCGCCGCCGCCCCCCGCCGC
CTACTTCCCGGCGCTCGAGATCGTCGACGTCTACAACAACAACCTGTCCGGCCCGCTCCC
GCCGCTGGGCGCGCCGCACGCGCGCTCCCTCCGCTACCTCCACCTCGGCGGGAACTACTT
CAACGGCTCCATCCCGGACACCTTCGGCGACCTCGCCGCGCTCGAGTACCTGGGCCTCAA
CGGCAACGCGCTGTCGGGCCGGGTCCCGCCCTCGCTCTCCCGCCTCTCCCGCCTCCGGGA
GATGTACGTCGGATACTACAACCAGTACAGCGGCGGGGTCCCGCGCGAGTTCGGCGCGCT
CCAGTCGCTCGTCCGCCTCGACATGAGCAGCTGCACGCTCACGGGGCCCATCCCGCCGGA
GCTCGCGCGGCTGTCCCGCCTCGACACGCTCTTCCTCGCCTTGAACCAGCTCACGGGGGA
GATACCGCCGGAGCTCGGCGCTCTCACCAGCCTTCGGTCGCTCGACCTCTCCATCAATGA
CCTCGCCGGCGAGATACCCGCCAGCTTCGCCGCTCTCACCAACCTCAAGCTGCTCAACCT
CTTCCGGAACCACCTCCGCGGCGAGATACCGGCCTTCCTCGGCGACTTCCCTTTCCTCGA
GGTGCTGCAGGTGTGGGACAACAACCTCACAGGCCCCCTCCCGCCCGCGCTCGGCAGGAA
CGGCCGCCTCAAGACGCTGGACGTCACCAGTAACCACCTCACCGGCACCATACCGCCGGA
CCTCTGCGCCGGACGGAACCTGCAGCTGCTCGTGCTCATGGACAACGGCTTCTTCGGCAG
CATCCCCGAGTCGCTCGGCGACTGCAAGACGCTCACGCGCGTCCGCCTCGGCAAGAACTT
CCTGACCGGCCCCGTCCCGGCCGGGCTCTTCGACCTTCCCCAGGCGAACATGCTCGAGCT
CACCGACAACATGCTCACCGGCGAGCTCCCGGACGTGATCGCTGGAGACAAGATCGGCAT
GCTCATGCTGGGGAACAATCGCATCGGAGGGCGCATCCCCGCCGCTATCGGCAACCTCCC
CGCGCTGCAGACGCTGTCCCTGGAGTCGAACAACTTCTCTGGCCCGCTGCCTCCGGAGAT
CGGCAGGCTCAGGAACCTCACCAGGCTCAACGCCAGCGGCAACGCGCTCACGGGAGGCAT
CCCGAGGGAGCTCATGGGCTGCGCCTCCCTGGGCGCCGTCGACCTCAGCCGGAACGGCCT
CACCGGCGAGATACCGGACACCGTGACGTCGCTCAAGATCCTGTGCACGCTCAACGTGTC
GAGGAACAGGCTGTCGGGCGAGCTGCCGGCGGCGATGGCCAACATGACGAGCCTGACGAC
GCTGGACGTGTCCTACAACCAGCTGTCGGGCCCCGTGCCGATGCAGGGCCAGTTCCTGGT
GTTCAACGAGAGCTCGTTCGTGGGCAACCCGGGGCTGTGCAGCGCGTGCCCCCCATCGTC
CGGCGGCGCGCGGTCGCCCTTCTCGCTGCGCCGGTGGGACTCGAAGAAGCTGCTGGTGTG
GCTGGTCGTTCTCCTCACCCTGCTGGTCCTGGCGGTCCTGGGCGCGCGGAAGGCGCACGA
GGCGTGGCGCGAGGCGGCGCGGCGGCGGTCGGGGGCCTGGAAGATGACGGCGTTCCAGAA
GCTGGACTTCTCGGCGGACGACGTGGTGGAGTGTCTCAAGGAGGACAACATCATCGGCAA
GGGCGGCGCCGGGATCGTGTACCACGGCGTGACCCGCGGCGGCGCGGAGCTGGCGATCAA
GCGGCTGGTGGGGAGAGGGTGCGGCGACCACGACCGCGGGTTCACCGCAGAGGTCACCAC
GCTGGGCCGCATCCGGCACCGCAACATCGTGCGCCTGCTCGGCTTCGTCTCCAACCGGGA
GGCCAACCTGCTGCTGTACGAGTACATGCCCAACGGGTCGCTAGGCGAGATGCTGCACGG
CGGCAAGGGGGGCCACCTCGGGTGGGAGGCCCGGGCGCGCGTTGCGGCGGAGGCGGCGCG
CGGGCTCTGCTACCTGCACCACGACTGCGCGCCCCGGATCATCCACCGCGACGTCAAGTC
CAACAACATCCTCCTCGACTCCGCCTTCGAGGCGCACGTCGCGGACTTTGGCCTCGCCAA
GTTCCTCGGCGGCGGCGGCGCCACGTCCGAGTGCATGTCTGCCATCGCCGGCTCCTACGG
CTACATCGCCCCAGAGTACGCGTACACCCTTCGCGTGGACGAGAAGAGTGACGTGTACAG
CTTCGGCGTGGTGCTGCTGGAGCTCATCACGGGGCGGCGCCCCGTGGGCAGCTTCGGCGA
CGGCGTGGACATCGTGCACTGGGTGCGCAAGGTGACCGCGGACGCCGCCGCCGCGGAGGA
GCCCGTCCTGCTGGTGGCGGACCGTCGGCTGGCGCCGGAGCCGGTGCCGCTGCTGGCGGA
CCTCTACAGGGTGGCCATGGCGTGCGTGGAGGAGGCCAGCACGGCCCGGCCCACCATGCG
CGAGGTCGTGCACATGCTCTCCACCTCCGCCGCGGCCCAGCCCGACGTCCCCCACGCCTT
GTGCAAGGTCGTCGATTAATTTGCCTTATATATGACGATTATGTATATGATCCGGGCAGG
GTTAGCGCCTGTGATCTATTTAGCGGCTGCCTTTTTGGCGTCACTCGTCTCGTGTGTGAT
GATGGCTGGATGGATGTGTAAAACAAATAACCAGCAGGTGGCTACTCGTGAATGAAAGTT
GCCGGTTCTTATTCTCATG