Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014773_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:62639884:62646464:1 gene:Zm00001d014773 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcium dependent protein kinase1 description: calcium dependent protein kinase1
Sequence

ATGGGGCAGTGCTACGGGAAGGCGCGCGGCGCGTCCTCGCGGGCGGACCACGACGCCGAC
CCCTCGGGGGCGGGGTCGGTCGCGCCGCCATCCCCGCTGCCGGCCAACGGCGCGCCGCTG
CCCGCCACGCCCAGGCGCCACAAGTCCGGATCCACCACGCCGGTGCACCACCACCAGGCG
GCGACGCCCGGCGCCGCCGCCTGGCCTAGTCCGTACCCGGCCGGCGGCGCCAGCCCGCTC
CCCGCGGGCGTGTCGCCGTCGCCGGCCCGGTCCACGCCCCGGAGGTTCTTCAAGCGGCCC
TTCCCGCCGCCCTCGCCCGCCAAGCACATCAAGGCCACGCTCGCCAAGCGCCTCGGCGGG
GGCAAGCCCAAGGAGGGCACCATACCGGAGGAGGGCGGCGCGGGGGCCGGGGCCGGGGCC
GGCGCCGGCGCGGCCGTTGGTGCCGCCGATTCCGCCGAGGCCGACCGCCCGTTGGACAAA
ACGTTCGGCTTCGCCAAGAACTTTGGGGCCAAGTACGATCTCGGGAAGGAGGTCGGGAGG
GGCCACTTTGGCCACACCTGCTCCGCCGTCGTCAAGAAGGGCGAGCACAAGGGCCATACT
GTCGCTGTCAAGATCATCTCCAAAGCTAAGATGACAACGGCCATTTCCATTGAAGATGTT
CGTAGGGAGGTCAAGATTTTGAAAGCCCTATCAGGGCACGATAATCTCGTCAGATTCTAT
GATGCATGTGAGGACGCCCTCAATGTCTACATTGTCATGGAATTATGTGAAGGTGGAGAG
TTGCTAGACAGAATTTTAGCAAGAGGTGGGAGATATACAGAAGAAGATGCCAAAGCGATC
ATTGTACAGATTTTGAGCGTAGTGGCCTTCTGTCATCTTCAGGGAGTAGTGCATCGTGAT
TTGAAGCCAGAGAATTTTCTCTTCACAACAAGAGATGAAAGCGCTCCTATGAAGTTGATT
GACTTTGGTCTGTCAGATTTTATTAGACCAGTATCGGCTGAGGCTAAGGATTTTGTGAAG
AGATTTCTGAACAAAGATTACCGCAAAAGAATGACTGCTGTCCAAGCACTGACTCACCCT
TGGTTACGAGATGAACAAAGGCAAATTCCATTGGACATACTCATTTTCAGATTAGTTAAG
CAGTATCTCCGTGCTACTCCTCTTAAACGTTTGGCATTAAAGGCACTATCTAAGGCTTTA
AGCGAGGATGAACTTTTGTATCTTAGGTTGCAGTTTAAGCTGCTTGAACCCAGAGATGGG
TTCGTGTCACTCGACAACTTTCGGGCGGCTCTGACAAGATACTCAACTGACGCCATGAGA
GAATCAAGGGTTCTTGAGTTTCAGCATGCGTTGGAACCACTTGCGTACAGAAAGATGGAC
TTTGAAGAATTCTGTGCTGCAGCAATCAGCCCGTACCAGCTGGAAGCTTTGGAAAGGTGG
GAAGAAATTGCTGGAACAGCTTTTCAGCACTTTGAACAAGAGGGCAACCGAGTTATATCA
GTTGAGGAGTTAGCACAGGAACTAAATCTCGCGCCGACACATTACTCCATTGTGCAAGAC
TGGATCAGAAAATCGGATGGCAAGCTTAACTTTCTTGGGTTCACCAAATTTTTGCACGGT
GTCACGATACGGGGTTCAAATACAAGACGACACTAA

Peptide Sequence

PEP ID

Zm00001d014773_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:62639884:62646464:1 gene:Zm00001d014773 transcript:Zm00001d014773_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcium dependent protein kinase1 description: calcium dependent protein kinase1
Sequence

MGQCYGKARGASSRADHDADPSGAGSVAPPSPLPANGAPLPATPRRHKSGSTTPVHHHQA
ATPGAAAWPSPYPAGGASPLPAGVSPSPARSTPRRFFKRPFPPPSPAKHIKATLAKRLGG
GKPKEGTIPEEGGAGAGAGAGAGAAVGAADSAEADRPLDKTFGFAKNFGAKYDLGKEVGR
GHFGHTCSAVVKKGEHKGHTVAVKIISKAKMTTAISIEDVRREVKILKALSGHDNLVRFY
DACEDALNVYIVMELCEGGELLDRILARGGRYTEEDAKAIIVQILSVVAFCHLQGVVHRD
LKPENFLFTTRDESAPMKLIDFGLSDFIRPVSAEAKDFVKRFLNKDYRKRMTAVQALTHP
WLRDEQRQIPLDILIFRLVKQYLRATPLKRLALKALSKALSEDELLYLRLQFKLLEPRDG
FVSLDNFRAALTRYSTDAMRESRVLEFQHALEPLAYRKMDFEEFCAAAISPYQLEALERW
EEIAGTAFQHFEQEGNRVISVEELAQELNLAPTHYSIVQDWIRKSDGKLNFLGFTKFLHG
VTIRGSNTRRH

Transcript Sequence

Transcript ID

Zm00001d014773_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:62639884:62646464:1 gene:Zm00001d014773 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcium dependent protein kinase1 description: calcium dependent protein kinase1
Sequence

CCTCCTCCTCCTGTCTCGCGCCCCCCTGGCCCCTGCTTCTTCTCCTTCCCCTTTCATTCC
CAACGAGGCAACGACCCGCCCTGCCCCGCCTCGCGATCCCCACCCGCGGCGGCGCGGAGG
GCCGGAACCCAAACCCTAACCCTAGCGGCCCGGGCGCCGCCTCCGGTCTCGCCCGCCCGC
CGCGCCGGGCCGCGATGGGGCAGTGCTACGGGAAGGCGCGCGGCGCGTCCTCGCGGGCGG
ACCACGACGCCGACCCCTCGGGGGCGGGGTCGGTCGCGCCGCCATCCCCGCTGCCGGCCA
ACGGCGCGCCGCTGCCCGCCACGCCCAGGCGCCACAAGTCCGGATCCACCACGCCGGTGC
ACCACCACCAGGCGGCGACGCCCGGCGCCGCCGCCTGGCCTAGTCCGTACCCGGCCGGCG
GCGCCAGCCCGCTCCCCGCGGGCGTGTCGCCGTCGCCGGCCCGGTCCACGCCCCGGAGGT
TCTTCAAGCGGCCCTTCCCGCCGCCCTCGCCCGCCAAGCACATCAAGGCCACGCTCGCCA
AGCGCCTCGGCGGGGGCAAGCCCAAGGAGGGCACCATACCGGAGGAGGGCGGCGCGGGGG
CCGGGGCCGGGGCCGGCGCCGGCGCGGCCGTTGGTGCCGCCGATTCCGCCGAGGCCGACC
GCCCGTTGGACAAAACGTTCGGCTTCGCCAAGAACTTTGGGGCCAAGTACGATCTCGGGA
AGGAGGTCGGGAGGGGCCACTTTGGCCACACCTGCTCCGCCGTCGTCAAGAAGGGCGAGC
ACAAGGGCCATACTGTCGCTGTCAAGATCATCTCCAAAGCTAAGATGACAACGGCCATTT
CCATTGAAGATGTTCGTAGGGAGGTCAAGATTTTGAAAGCCCTATCAGGGCACGATAATC
TCGTCAGATTCTATGATGCATGTGAGGACGCCCTCAATGTCTACATTGTCATGGAATTAT
GTGAAGGTGGAGAGTTGCTAGACAGAATTTTAGCAAGAGGTGGGAGATATACAGAAGAAG
ATGCCAAAGCGATCATTGTACAGATTTTGAGCGTAGTGGCCTTCTGTCATCTTCAGGGAG
TAGTGCATCGTGATTTGAAGCCAGAGAATTTTCTCTTCACAACAAGAGATGAAAGCGCTC
CTATGAAGTTGATTGACTTTGGTCTGTCAGATTTTATTAGACCAGTATCGGCTGAGGCTA
AGGATTTTGTGAAGAGATTTCTGAACAAAGATTACCGCAAAAGAATGACTGCTGTCCAAG
CACTGACTCACCCTTGGTTACGAGATGAACAAAGGCAAATTCCATTGGACATACTCATTT
TCAGATTAGTTAAGCAGTATCTCCGTGCTACTCCTCTTAAACGTTTGGCATTAAAGGCAC
TATCTAAGGCTTTAAGCGAGGATGAACTTTTGTATCTTAGGTTGCAGTTTAAGCTGCTTG
AACCCAGAGATGGGTTCGTGTCACTCGACAACTTTCGGGCGGCTCTGACAAGATACTCAA
CTGACGCCATGAGAGAATCAAGGGTTCTTGAGTTTCAGCATGCGTTGGAACCACTTGCGT
ACAGAAAGATGGACTTTGAAGAATTCTGTGCTGCAGCAATCAGCCCGTACCAGCTGGAAG
CTTTGGAAAGGTGGGAAGAAATTGCTGGAACAGCTTTTCAGCACTTTGAACAAGAGGGCA
ACCGAGTTATATCAGTTGAGGAGTTAGCACAGGAACTAAATCTCGCGCCGACACATTACT
CCATTGTGCAAGACTGGATCAGAAAATCGGATGGCAAGCTTAACTTTCTTGGGTTCACCA
AATTTTTGCACGGTGTCACGATACGGGGTTCAAATACAAGACGACACTAAACAGATGCAA
ACTGTATTCGCTTCTAATTTGAAGCCTCTCATCGATTATATGGCCCTGATTGCTGTTACC
TCCTGCCTGCCCTGCCCGAGTCTGGTCAATGACCATCCTTGTTTGTGATGCCCCTCCCGC
TGTTGCCGTCGTAGCTTTTGTAGAGTACATGTAAAGATCCTTGTAATGGCGAAATCATAT
GGTTTGCTCAAGAAATATATAGTGTCATTTGTTCTTTTTTTTTTGGCTCGCTAA