Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d014736_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:61113261:61115377:1 gene:Zm00001d014736 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGAACTTGTACTGCTCCGTTCCCGGCCTCCAGTCCTCCTCCGTGTTTGCTATGCAGAGC CTAAACATGCAAGAACCACCCATAGCGCAGAGGAAGAAGCAGGAGAGCGCGAGGCCCAGC ACGACGGCCTCGACGACGTACATGACGCGGAACGCGACAGCGTCGACCACGGCGGCCGCG GAGCCGCTGCGCAGGATCCACGCCCACCTCGTCACCTCCGGACACCTCTCTTCCCTCGGA CCCACCCTCCTGCACCGGCTCATTTCGCTGCACCCGCCGCATCTCCAACTTGCTTACGCT CACCGCCTTCTCCTCTCCATCCCATCCCCGCCGCTCGACCTCTTCAACCTCCTACTGCCG CCGCTCGCCTCCTCGCCCGATCCCGCCGCCGCGGCCGGACTCTACATCCACCTCCGCCGC CGGGGCCTTGGCCCGGATGCCCACACGCTCCCGCACGTCCTCAAGGCGCTCGCGCGCCTC GGTCCAGGATGCCTCCCGCTCGTCGCCTGCACCCACGCGGAGGCCGTCAAGACCGGCCTT GCGCGCGCCGTGGTGTACGTGCCGAACGCCCTCATGTCTGCGTACTCTGCCTGCGGCCAC CTCCATCGCGCCATGCAGGTGTTCGACGAAATGCCGCGTTGGACCGTTGTGTCATGGAAC ACCGTGCTCACTGCCTGCGCGGACAACGGCCGCCACGACCGGTGCGCCGGGATGTTCGTG AACATGTTAGAGGCTGGGTCTGTGCCCGATCAGACGACGTTCGTGGTCATGCTCACCGCT GCGGCTGAGCTGGGGAACTTGGCGCTTGGCAAGTGGGCGCATGGGCAGGTCCTTACCCGA CGTACTGACATGACGCTTCAGCTTGGCACGGCTGTTGTGAATATGTACACCAAGTGCGGC GAGGTGAGTTATGCATCGCGCTTGTTTGAGAATATGGCAGCACGGAACGTCTGGACATGG AGCGCGATGATCATGGGGTATTCACAGAACGGGATGGTACGAGAAGCACTGGAGCTTTTC GACAGGATGAAGGATGCATCAGTTGCGCCCAACTATGTCACATTTCTTGGACTCCTCTGC GGATGCAGCCATGCTGGTCTGGTCAACGAGGGCCGCAAATTCTTCCATGAAATGGAGCAT GTCTATGGCATCAAGCCAATGATGACCCACTACAGTGCCATGGTTGATGTCCTGGGACGC AACGGCCGCCTCCAGGAAGCTTTTGAGTTTGTCGTGGACATGCCTGTCGAGGCTGACACG GTCGTTTGGAGGACGTTGCTGAGCGCCTGCCAACTGCACAGCTCCAAGGACTGCATTGGC ATCGCTGATAAGGCGCAGAAGAGGTTGCTGGAGTTGGAGCCCCGCAGAAGTGGGAACCAT GTGATGGTCGCGAACATCTACTCTGACATTGGGTTGTGGGACAAGGCAGCCATGGCGAGG AGGGTGATGAGGGAAGGAGGGATGAAGAAGATGGCGGGGGAGAGCTGCGTCGAGGTAGGA GGGCGGATTCACCGATTCATCTCTGGGGATGAATCCTGTCCTGGGTTGGGTGGGGTTTAC AGGGTTCTTCATGAGTTGAACATCAACATGAGAAAATGGGAACCTGTGGACAAAATTTTG CTTGCTGATTCTGACCTGTGA

Peptide Sequence

PEP ID	Zm00001d014736_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:61113261:61115377:1 gene:Zm00001d014736 transcript:Zm00001d014736_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MNLYCSVPGLQSSSVFAMQSLNMQEPPIAQRKKQESARPSTTASTTYMTRNATASTTAAA EPLRRIHAHLVTSGHLSSLGPTLLHRLISLHPPHLQLAYAHRLLLSIPSPPLDLFNLLLP PLASSPDPAAAAGLYIHLRRRGLGPDAHTLPHVLKALARLGPGCLPLVACTHAEAVKTGL ARAVVYVPNALMSAYSACGHLHRAMQVFDEMPRWTVVSWNTVLTACADNGRHDRCAGMFV NMLEAGSVPDQTTFVVMLTAAAELGNLALGKWAHGQVLTRRTDMTLQLGTAVVNMYTKCG EVSYASRLFENMAARNVWTWSAMIMGYSQNGMVREALELFDRMKDASVAPNYVTFLGLLC GCSHAGLVNEGRKFFHEMEHVYGIKPMMTHYSAMVDVLGRNGRLQEAFEFVVDMPVEADT VVWRTLLSACQLHSSKDCIGIADKAQKRLLELEPRRSGNHVMVANIYSDIGLWDKAAMAR RVMREGGMKKMAGESCVEVGGRIHRFISGDESCPGLGGVYRVLHELNINMRKWEPVDKIL LADSDL

Transcript Sequence

Transcript ID	Zm00001d014736_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:61113261:61115377:1 gene:Zm00001d014736 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGAACTTGTACTGCTCCGTTCCCGGCCTCCAGTCCTCCTCCGTGTTTGCTATGCAGAGC CTAAACATGCAAGAACCACCCATAGCGCAGAGGAAGAAGCAGGAGAGCGCGAGGCCCAGC ACGACGGCCTCGACGACGTACATGACGCGGAACGCGACAGCGTCGACCACGGCGGCCGCG GAGCCGCTGCGCAGGATCCACGCCCACCTCGTCACCTCCGGACACCTCTCTTCCCTCGGA CCCACCCTCCTGCACCGGCTCATTTCGCTGCACCCGCCGCATCTCCAACTTGCTTACGCT CACCGCCTTCTCCTCTCCATCCCATCCCCGCCGCTCGACCTCTTCAACCTCCTACTGCCG CCGCTCGCCTCCTCGCCCGATCCCGCCGCCGCGGCCGGACTCTACATCCACCTCCGCCGC CGGGGCCTTGGCCCGGATGCCCACACGCTCCCGCACGTCCTCAAGGCGCTCGCGCGCCTC GGTCCAGGATGCCTCCCGCTCGTCGCCTGCACCCACGCGGAGGCCGTCAAGACCGGCCTT GCGCGCGCCGTGGTGTACGTGCCGAACGCCCTCATGTCTGCGTACTCTGCCTGCGGCCAC CTCCATCGCGCCATGCAGGTGTTCGACGAAATGCCGCGTTGGACCGTTGTGTCATGGAAC ACCGTGCTCACTGCCTGCGCGGACAACGGCCGCCACGACCGGTGCGCCGGGATGTTCGTG AACATGTTAGAGGCTGGGTCTGTGCCCGATCAGACGACGTTCGTGGTCATGCTCACCGCT GCGGCTGAGCTGGGGAACTTGGCGCTTGGCAAGTGGGCGCATGGGCAGGTCCTTACCCGA CGTACTGACATGACGCTTCAGCTTGGCACGGCTGTTGTGAATATGTACACCAAGTGCGGC GAGGTGAGTTATGCATCGCGCTTGTTTGAGAATATGGCAGCACGGAACGTCTGGACATGG AGCGCGATGATCATGGGGTATTCACAGAACGGGATGGTACGAGAAGCACTGGAGCTTTTC GACAGGATGAAGGATGCATCAGTTGCGCCCAACTATGTCACATTTCTTGGACTCCTCTGC GGATGCAGCCATGCTGGTCTGGTCAACGAGGGCCGCAAATTCTTCCATGAAATGGAGCAT GTCTATGGCATCAAGCCAATGATGACCCACTACAGTGCCATGGTTGATGTCCTGGGACGC AACGGCCGCCTCCAGGAAGCTTTTGAGTTTGTCGTGGACATGCCTGTCGAGGCTGACACG GTCGTTTGGAGGACGTTGCTGAGCGCCTGCCAACTGCACAGCTCCAAGGACTGCATTGGC ATCGCTGATAAGGCGCAGAAGAGGTTGCTGGAGTTGGAGCCCCGCAGAAGTGGGAACCAT GTGATGGTCGCGAACATCTACTCTGACATTGGGTTGTGGGACAAGGCAGCCATGGCGAGG AGGGTGATGAGGGAAGGAGGGATGAAGAAGATGGCGGGGGAGAGCTGCGTCGAGGTAGGA GGGCGGATTCACCGATTCATCTCTGGGGATGAATCCTGTCCTGGGTTGGGTGGGGTTTAC AGGGTTCTTCATGAGTTGAACATCAACATGAGAAAATGGGAACCTGTGGACAAAATTTTG CTTGCTGATTCTGACCTGTGA