Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014718_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:60363598:60365004:1 gene:Zm00001d014718 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thylakoid lumenal 16.5 kDa protein chloroplastic
Sequence

ATGGTGTCCATTGTCACTGAGGTATGGGCGCTCGCTGGATGCGGCCCGGCGTCCAAGGCG
GCGGCGGTAGCGGTAGCGGCGCAGGAGTTGCCGGCGCAGCATCCTTCTCCTGCCGCAGCG
GGAGGAGGGAAGGCCAAGAAGAGAGCCGTGCCAGTGTCGTTCAGAGGCGTCAGCAGCGGC
GGTGGTCAGGACCACCAGCGTGAGGCCGCCGCCGTCGTCGTCGGGCGGCGGCGCGGCCTC
GCGTCGTGCGCGCTCGCCGCCGTCGCCGCCTCGTTCTCCGCCCGCGCTGACCGCCCCGCG
CGGGCGCTTGTCCTCGAGGAAGACGACGACATCGAGCTGCTGGAGCGCGTGAAGGAGGAC
AGGAAGAAGCGGCTGCAGAAGCAGGGCATCATCAGCTCCTCCGGCGCCGAGACCGGGTAT
TTGCAGGACCTCATCTACAGGCTCAGCAAAGTCGGGCAGGCCATTGACAACGACGACCTC
CCAGCCGCGAGCAGCGTGCTGGGACCAAGCTCAGACGCCCAGTGGGTGCAGAACATCAAT
GCAGCTTTCTCCAAGCTCAGCTCAAGCCCGGAGCAGAGGAACGTGGTCGACAGCTTCAAC
AGCTCGCTGGCCACACTGTTTACATCAGTGAGCAAGCTCGACCCTGAATCCTCCAAGTCG
GCGTTCGTGTCGTCCGCGACGGCGTTGGAGAAATGGATCGCGTTAGCTGGACTGGGCGGC
CAGCTCAAGGGCTACTGA

Peptide Sequence

PEP ID

Zm00001d014718_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:60363598:60365004:1 gene:Zm00001d014718 transcript:Zm00001d014718_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thylakoid lumenal 16.5 kDa protein chloroplastic
Sequence

MVSIVTEVWALAGCGPASKAAAVAVAAQELPAQHPSPAAAGGGKAKKRAVPVSFRGVSSG
GGQDHQREAAAVVVGRRRGLASCALAAVAASFSARADRPARALVLEEDDDIELLERVKED
RKKRLQKQGIISSSGAETGYLQDLIYRLSKVGQAIDNDDLPAASSVLGPSSDAQWVQNIN
AAFSKLSSSPEQRNVVDSFNSSLATLFTSVSKLDPESSKSAFVSSATALEKWIALAGLGG
QLKGY

Transcript Sequence

Transcript ID

Zm00001d014718_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:60363598:60365004:1 gene:Zm00001d014718 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thylakoid lumenal 16.5 kDa protein chloroplastic
Sequence

CTCTTGGTGCTGCTTCCTGGTGGGGGAAGGGAAGGAGAAGGCTGTGTGCGTCCTGCGCCG
ATAACGCGATGGTGTCCATTGTCACTGAGGTATGGGCGCTCGCTGGATGCGGCCCGGCGT
CCAAGGCGGCGGCGGTAGCGGTAGCGGCGCAGGAGTTGCCGGCGCAGCATCCTTCTCCTG
CCGCAGCGGGAGGAGGGAAGGCCAAGAAGAGAGCCGTGCCAGTGTCGTTCAGAGGCGTCA
GCAGCGGCGGTGGTCAGGACCACCAGCGTGAGGCCGCCGCCGTCGTCGTCGGGCGGCGGC
GCGGCCTCGCGTCGTGCGCGCTCGCCGCCGTCGCCGCCTCGTTCTCCGCCCGCGCTGACC
GCCCCGCGCGGGCGCTTGTCCTCGAGGAAGACGACGACATCGAGCTGCTGGAGCGCGTGA
AGGAGGACAGGAAGAAGCGGCTGCAGAAGCAGGGCATCATCAGCTCCTCCGGCGCCGAGA
CCGGGTATTTGCAGGACCTCATCTACAGGCTCAGCAAAGTCGGGCAGGCCATTGACAACG
ACGACCTCCCAGCCGCGAGCAGCGTGCTGGGACCAAGCTCAGACGCCCAGTGGGTGCAGA
ACATCAATGCAGCTTTCTCCAAGCTCAGCTCAAGCCCGGAGCAGAGGAACGTGGTCGACA
GCTTCAACAGCTCGCTGGCCACACTGTTTACATCAGTGAGCAAGCTCGACCCTGAATCCT
CCAAGTCGGCGTTCGTGTCGTCCGCGACGGCGTTGGAGAAATGGATCGCGTTAGCTGGAC
TGGGCGGCCAGCTCAAGGGCTACTGATGCGTGCGAGGGGAAGAGAAGCACTGGGTTGTTC
TATGTTTGGGTCCGGCATTTGTGAATCTCCTGAAGAGGGTACCGTGACCGAGAACTGAGT
TCAGATAGGCATGCTATGCTCATCAAGAAACTGTGACTGTTTTTGAGACTCTGCTGTTAC
TTACAAGTGGTAGGAAACGAAGTTGTCTTGTATCTTGTTGTCCAGTTTAACTTTCGAAAT
TCCAAAGCAGCTGGCGTTTATTTTTTTTAAATCC