Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014696_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:5:59771907:59774460:1 gene:Zm00001d014696 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-phosphoinositide-dependent protein kinase-1
Sequence

ATGGGGACCTCTGCCCAGGAATCGCCTCTCTGGAAGCGTATCGACGATGCCGAGTACTAT
CTAGTCAGTGGATCATTTGACCAGGCGGTGTTGACTGCTTTATCCGTCGCCGATGAAATA
CACATGGCTTCTTTGGAGAGCGCTAGCGACCAGGATGAGCTCCTGGAGATGCTTGAATCG
GCTGGGATGGTGCTTGTGCAGGCACTAAAAGAACTCAGGAGGGCCTCTGAGATGTTTGCT
CAGCTTAAGATGATGTTTGGTTCAGTGCCATCAGTGCCTGCTAGAGTTTTCCTTACAGGA
GCTACCATTCAAATGGCAGAAGGATCTATATCTGACCTCAGACCAATCTTTGAGGAGTAC
CTTGCCAATTGGAGATATACGGATGATGAGGTTTATGTTTTTGATGGAGGAAATGACAGC
ACTTCAAATGGTTTTGTCGTTAAATCTATTATGTCAACTGGCCAGTATTTTGAGGTGGCA
GAATTGTATACAGTAACATTCCTCTGTATTGTCTCTCAAGATAGTGAAACTGCTATCTCA
TGGGCAGAAAAGGCTCATCTAACTGAGCAAAGCCGGCAGGACCTACTAAAAAAGCTTCAT
GCAGTGCAATTAGCTGCAAATAAAAAACTGTCCACTGTTGAAGGGGTAAAACAAACAGCA
GAGAGGAACCTTTCTACTTCTACAAATGACTCAACACCATCGCCACATGAGGATCCTCCA
AAGATAGTTCCTGCGTGCGATGGGCTCAAAAAGGTCCTGCTGAAGTCTGCTCAACAAGCT
CAGCATGTTGCAAATCATTTTGATCCGTTTTTCTGGTGGTTTCATTCAATTCGCCTGAAG
TTTGGGAAAATACATATTGTTCTACCCAGTGGTAAGTTAGTGTTTCTGTTCTCTCTGCTG
TTCTCAGCCATGTACGTGCTGCGAAGGAAAACTGCTGGCTTGAAGAGGGCTGTGTTCCAG
CAAGCTGCTTCCCTGCGACGAGCATTTTTTGATGCACTTCAGCTTGCGTTCTCTGTCCAG
ATGAACCCTCTAGCTGCTGTTCAACAAGTGCCACAAGCCCCTCGAGGAAGCTGGTGA

Peptide Sequence

PEP ID

Zm00001d014696_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:5:59771907:59774460:1 gene:Zm00001d014696 transcript:Zm00001d014696_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-phosphoinositide-dependent protein kinase-1
Sequence

MGTSAQESPLWKRIDDAEYYLVSGSFDQAVLTALSVADEIHMASLESASDQDELLEMLES
AGMVLVQALKELRRASEMFAQLKMMFGSVPSVPARVFLTGATIQMAEGSISDLRPIFEEY
LANWRYTDDEVYVFDGGNDSTSNGFVVKSIMSTGQYFEVAELYTVTFLCIVSQDSETAIS
WAEKAHLTEQSRQDLLKKLHAVQLAANKKLSTVEGVKQTAERNLSTSTNDSTPSPHEDPP
KIVPACDGLKKVLLKSAQQAQHVANHFDPFFWWFHSIRLKFGKIHIVLPSGKLVFLFSLL
FSAMYVLRRKTAGLKRAVFQQAASLRRAFFDALQLAFSVQMNPLAAVQQVPQAPRGSW

Transcript Sequence

Transcript ID

Zm00001d014696_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:59771907:59774460:1 gene:Zm00001d014696 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-phosphoinositide-dependent protein kinase-1
Sequence

CAGGTGCCGAGGCCTTCGCCGATCAAAGAGATCCCAGACAGCAGGGTGTCCATGTGTACA
CCCATGTCCTTCTACTAGATCCGTCCGTGCCCTGCTCCTCGAACCATGGGGACCTCTGCC
CAGGAATCGCCTCTCTGGAAGCGTATCGACGATGCCGAGTACTATCTAGTCAGTGGATCA
TTTGACCAGGCGGTGTTGACTGCTTTATCCGTCGCCGATGAAATACACATGGCTTCTTTG
GAGAGCGCTAGCGACCAGGATGAGCTCCTGGAGATGCTTGAATCGGCTGGGATGGTGCTT
GTGCAGGCACTAAAAGAACTCAGGAGGGCCTCTGAGATGTTTGCTCAGCTTAAGATGATG
TTTGGTTCAGTGCCATCAGTGCCTGCTAGAGTTTTCCTTACAGGAGCTACCATTCAAATG
GCAGAAGGATCTATATCTGACCTCAGACCAATCTTTGAGGAGTACCTTGCCAATTGGAGA
TATACGGATGATGAGGTTTATGTTTTTGATGGAGGAAATGACAGCACTTCAAATGGTTTT
GTCGTTAAATCTATTATGTCAACTGGCCAGTATTTTGAGGTGGCAGAATTGTATACAGTA
ACATTCCTCTGTATTGTCTCTCAAGATAGTGAAACTGCTATCTCATGGGCAGAAAAGGCT
CATCTAACTGAGCAAAGCCGGCAGGACCTACTAAAAAAGCTTCATGCAGTGCAATTAGCT
GCAAATAAAAAACTGTCCACTGTTGAAGGGGTAAAACAAACAGCAGAGAGGAACCTTTCT
ACTTCTACAAATGACTCAACACCATCGCCACATGAGGATCCTCCAAAGATAGTTCCTGCG
TGCGATGGGCTCAAAAAGGTCCTGCTGAAGTCTGCTCAACAAGCTCAGCATGTTGCAAAT
CATTTTGATCCGTTTTTCTGGTGGTTTCATTCAATTCGCCTGAAGTTTGGGAAAATACAT
ATTGTTCTACCCAGTGGTAAGTTAGTGTTTCTGTTCTCTCTGCTGTTCTCAGCCATGTAC
GTGCTGCGAAGGAAAACTGCTGGCTTGAAGAGGGCTGTGTTCCAGCAAGCTGCTTCCCTG
CGACGAGCATTTTTTGATGCACTTCAGCTTGCGTTCTCTGTCCAGATGAACCCTCTAGCT
GCTGTTCAACAAGTGCCACAAGCCCCTCGAGGAAGCTGGTGATTGGTGATGTTCTTTATG
CCTTGATCTATGTAACATTATAACTCAACTGAAATTCAACAGGCAACCAGATTTCATGTC
G