Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014689_T024
CDS Infomation

cds chromosome:B73_RefGen_v4:5:59194922:59200659:1 gene:Zm00001d014689 gene_biotype:protein_coding transcript_biotype:protein_coding description:L-arabinokinase
Sequence

ATGGTCTCAGGATATGTACTTCAAAGGGTTCCTGGGAGAGATGCAGGCATTCCTGACTGG
TACTCTGTGTCCGAAACCAAAACTGGTGGCGGTCCGACCTCACAAAATGTTGCTACAAAG
GAAAGTGCAGCATTATGTATTGAAGACATTGAGATACTCCATGGGGACCTTCAAGGATTA
ACAGATACAGTGGACTTTTTGAAGAGCTTATCTGAACTTAATGGAAATGATTTGAAGAGC
CCTAAGAAGCAAGACCTAGAGAGAACTGCTGCATCTGTTCTTTTTGACTGGGAGACAGAA
ATATATGTAGCAAGGGCACCTGGACGTTTGGACGTCATGGGTGGCATTGCTGATTATTCA
GGGAGTCTTGTTTTGCAGATGCCTCTTCGGGAAGCTTGCCATGTTGCTGTTCAGAGAAAC
CATCCCAGCAAGCAGAAGCTTTGGAAACATACAAAAGCAAGACAGCTTGTTAACGGAGGC
TTGGTACCTGTGATACAAATTGTATCATTTGGTTCTGATTTGAGTAACCGTGCACCAACT
TTTGATATGGACCTGTCAGATTTTATGGATGATGGTAAACCAATATCCTATGAGAAAGCC
AGGGAGCTTTTCTGTCAGGATCCATCCCAAAAATGGGCTGCCTATGTTGCTGGAACAATT
CTAGTTTTGATGACTGAACTTGGTGCCCAGTTCACTGACAGCATTAGCATTCTGGTTTCA
TCTGCCGTGCCAGAAGGAAAAGGTGTTTCATCTTCTGCATCAGTGGAGGTTGCTACAATG
TCTGCTATCGCCGCAGCCTATGGTTTAAACATCATACCAAGGGATCTTGCTTTGCTTTGT
CAGAAGGTTGAGAATCATGTAGTTGGAGCTCCTTGTGGAGTAATGGATCAAATGGCATCT
GCGTGTGGAGAAGCTAACAAACTCCTTGCGATGGTTTGCCAGCCTGCCGAAGTGAAGGAA
TTGGTTAGCATACCTACTCATATACGGTTCTGGGGTCTAGATTCAGGGATACGGCATAGT
GTTGGCGGGGGAGATTATGGATCTGTGAGGGTAGGCACTTACATGGGACGAAAGATGATC
AAGTGTACAGCATCAGATTTAGTTTCAGAATCCTTGACTTCAGGGTCCCCTGCTCAGTCT
GATTGTTATAAAGAAAATGGTGTGGGCGTACTGAAATCTGAAGCTGCACTGGAGTATTTG
TGCAACCTACCACCTCACAGATATGAAGCTGTTTATGCAAAAGACATTCCAGAGGTGATT
AGTGGAGAAGCATTTTCAGAGAAATATGGAGATCACGATGACACAGTGACAGTTATTGAT
CCTAAAAGATCTTACAGTGTGAAGGCTCCTACTAGACATCCCATATATGAGAACTTCCGT
GTCGAGGCCTTCAAAACGTTATTAGAGGCAGGTAATACAGACGAGCAGCTGTCAGCCCTT
GGAGAACTTATGTACCAGTGCCACAACAGCTACAGCGCATGTGGCCTCGGTTCTGATGGG
ACTGACAGACTAGTCAACCTGGTACGAGAAGTGCAACACAGGAGGACATCCGAAGGCGGA
AGCCCTAGTCTGTTTGGCGCAAAGATCACCGGCGGAGGCTCCGGCGGCACAGTATGTGTT
GTTGGGAAGAACTGCGCCAGGAGCAGTGAAGAGATTGCAGAGATTCAGCACAGATACAAG
GCTGAGACCGGGTATCTGCCCATTCTTTTCGACGGGTCGTCTCCAGGAGCTGGGAAGTTT
GGTTACCTGAAGATCCGACGTCGTTGTCCCTAG

Peptide Sequence

PEP ID

Zm00001d014689_P024
PEP Infomation

pep chromosome:B73_RefGen_v4:5:59194922:59200659:1 gene:Zm00001d014689 transcript:Zm00001d014689_T024 gene_biotype:protein_coding transcript_biotype:protein_coding description:L-arabinokinase
Sequence

MVSGYVLQRVPGRDAGIPDWYSVSETKTGGGPTSQNVATKESAALCIEDIEILHGDLQGL
TDTVDFLKSLSELNGNDLKSPKKQDLERTAASVLFDWETEIYVARAPGRLDVMGGIADYS
GSLVLQMPLREACHVAVQRNHPSKQKLWKHTKARQLVNGGLVPVIQIVSFGSDLSNRAPT
FDMDLSDFMDDGKPISYEKARELFCQDPSQKWAAYVAGTILVLMTELGAQFTDSISILVS
SAVPEGKGVSSSASVEVATMSAIAAAYGLNIIPRDLALLCQKVENHVVGAPCGVMDQMAS
ACGEANKLLAMVCQPAEVKELVSIPTHIRFWGLDSGIRHSVGGGDYGSVRVGTYMGRKMI
KCTASDLVSESLTSGSPAQSDCYKENGVGVLKSEAALEYLCNLPPHRYEAVYAKDIPEVI
SGEAFSEKYGDHDDTVTVIDPKRSYSVKAPTRHPIYENFRVEAFKTLLEAGNTDEQLSAL
GELMYQCHNSYSACGLGSDGTDRLVNLVREVQHRRTSEGGSPSLFGAKITGGGSGGTVCV
VGKNCARSSEEIAEIQHRYKAETGYLPILFDGSSPGAGKFGYLKIRRRCP

Transcript Sequence

Transcript ID

Zm00001d014689_T024
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:59194922:59200659:1 gene:Zm00001d014689 gene_biotype:protein_coding transcript_biotype:protein_coding description:L-arabinokinase
Sequence

AGGTGGTTTCCCAGATTCTCCAGGACACTGCTATTGGAAACAAATGTATTTCTGATAAAG
CTAGTGGTGCAAGAAGATTGCAAGATGCCATGGTCTCAGGATATGTACTTCAAAGGGTTC
CTGGGAGAGATGCAGGCATTCCTGACTGGTACTCTGTGTCCGAAACCAAAACTGGTGGCG
GTCCGACCTCACAAAATGTTGCTACAAAGGAAAGTGCAGCATTATGTATTGAAGACATTG
AGATACTCCATGGGGACCTTCAAGGATTAACAGATACAGTGGACTTTTTGAAGAGCTTAT
CTGAACTTAATGGAAATGATTTGAAGAGCCCTAAGAAGCAAGACCTAGAGAGAACTGCTG
CATCTGTTCTTTTTGACTGGGAGACAGAAATATATGTAGCAAGGGCACCTGGACGTTTGG
ACGTCATGGGTGGCATTGCTGATTATTCAGGGAGTCTTGTTTTGCAGATGCCTCTTCGGG
AAGCTTGCCATGTTGCTGTTCAGAGAAACCATCCCAGCAAGCAGAAGCTTTGGAAACATA
CAAAAGCAAGACAGCTTGTTAACGGAGGCTTGGTACCTGTGATACAAATTGTATCATTTG
GTTCTGATTTGAGTAACCGTGCACCAACTTTTGATATGGACCTGTCAGATTTTATGGATG
ATGGTAAACCAATATCCTATGAGAAAGCCAGGGAGCTTTTCTGTCAGGATCCATCCCAAA
AATGGGCTGCCTATGTTGCTGGAACAATTCTAGTTTTGATGACTGAACTTGGTGCCCAGT
TCACTGACAGCATTAGCATTCTGGTTTCATCTGCCGTGCCAGAAGGAAAAGGTGTTTCAT
CTTCTGCATCAGTGGAGGTTGCTACAATGTCTGCTATCGCCGCAGCCTATGGTTTAAACA
TCATACCAAGGGATCTTGCTTTGCTTTGTCAGAAGGTTGAGAATCATGTAGTTGGAGCTC
CTTGTGGAGTAATGGATCAAATGGCATCTGCGTGTGGAGAAGCTAACAAACTCCTTGCGA
TGGTTTGCCAGCCTGCCGAAGTGAAGGAATTGGTTAGCATACCTACTCATATACGGTTCT
GGGGTCTAGATTCAGGGATACGGCATAGTGTTGGCGGGGGAGATTATGGATCTGTGAGGG
TAGGCACTTACATGGGACGAAAGATGATCAAGTGTACAGCATCAGATTTAGTTTCAGAAT
CCTTGACTTCAGGGTCCCCTGCTCAGTCTGATTGTTATAAAGAAAATGGTGTGGGCGTAC
TGAAATCTGAAGCTGCACTGGAGTATTTGTGCAACCTACCACCTCACAGATATGAAGCTG
TTTATGCAAAAGACATTCCAGAGGTGATTAGTGGAGAAGCATTTTCAGAGAAATATGGAG
ATCACGATGACACAGTGACAGTTATTGATCCTAAAAGATCTTACAGTGTGAAGGCTCCTA
CTAGACATCCCATATATGAGAACTTCCGTGTCGAGGCCTTCAAAACGTTATTAGAGGCAG
GTAATACAGACGAGCAGCTGTCAGCCCTTGGAGAACTTATGTACCAGTGCCACAACAGCT
ACAGCGCATGTGGCCTCGGTTCTGATGGGACTGACAGACTAGTCAACCTGGTACGAGAAG
TGCAACACAGGAGGACATCCGAAGGCGGAAGCCCTAGTCTGTTTGGCGCAAAGATCACCG
GCGGAGGCTCCGGCGGCACAGTATGTGTTGTTGGGAAGAACTGCGCCAGGAGCAGTGAAG
AGATTGCAGAGATTCAGCACAGATACAAGGCTGAGACCGGGTATCTGCCCATTCTTTTCG
ACGGGTCGTCTCCAGGAGCTGGGAAGTTTGGTTACCTGAAGATCCGACGTCGTTGTCCCT
AGTGGCTGATTGGGAAACGAAGAACTTCAGTTCGAGCTTTGTCACATATCACTCAATTGT
TAAGAACCTCACTCCAACTCTCCAAGCCATTGTAGAACATAGAGGCGTATTGCCACTTGC
GATGATTCGTCGTTCACACACAAAATATTATCATGTGCTACACCAATTCTGGAAGCTACT
AGAGGAAAATGTGAGGAATATAAAGAAACTCTTGTTGAGCAGATGTAGTCTAGTGGTCTC
CGTGTGCTTGCTGCAGTGTAACCAAACTCCAAGTAGATGTGCTCTGGGCTCTGGCATGTG
GTATGTGATGAAGTCGAGGATGGTTTCTTGCCGTTTGATGACCAGTGTAGTCGTTGGTTA
ACTTGTCAGTCGTAAACTGATGTTGTCAGTTAGGAGCGGATAAAGTTTGTGTGTGTTGTC
AGTGTATCTGTGTGTAAGTTTATTGGACAGACCGAAAGATACACCACGAACCCAGATGAA
GTAGGTAATAGTCGTATGTGAAGTTTTTATCATTAGGGTTGCAAATGCATTAAATCACTT
ATAAATATATGATGATT