Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d014680_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:58716795:58719001:-1 gene:Zm00001d014680 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sodium transporter HKT1
Sequence	ATGCCTGTCCGGCTCCATGTCTTGGCCAGCACCGCGAGGCACGCCGCCAGCTCGTCAGCG CTCGTCTTCCGGCTCGTCGCCTTCCGCCTCACCCCGCTTCTGCTCCACCTGTCCTACTTC CTCGCCATCGACCTGCTCGGCTTCCTCGCCCTGGTGCTGCTCAGGCGAAGCAGCCCCGCC GCGGGGGCGTACCGTCCGCGCTACGTCGACGTGCTCTTCATGTCCACGTCCGCGGTCACG GTCACCGGGCTGGCCACCGTCGAGATGGAGGACCTGTCCGCCTCCCAGCTCGTCGTCCTC ACCCTCCTCATGCTCCTGGGCAGCGAGGTGTTCGTCTCCGTGCTCGGCCTCGTCCTCGAG TCGTCGCGCCAGCAGCGACAGCAGCGCGGTCAGTCTCGTCGTCAGGATCACGCCGGCAGG GTAATAAGGCCGTCGTCGGTCACGGCCGCCGTCCGCGACGAGCCGGACCTCGAAGAGGCG GGTAATAATATTAATAGCCAGGCGCCTCCGTCGTCGTCTGAGGACTCGTCCGGCGACGGT GACAACCACAAAGAGAGATGCCGCGCCGTCAGAAGCCTAGCGCTCGTGCTCTCGGCCTAC ATGGCCGCGGTCCTCGTCGCCGGCTCCGTGCTGGTCTTCGCGTACGTGGCCACCGTCCCG GCCGCGCGCGACGTGCTGGCGAGGAAGCGCCTCGGCGCCGCGCTCTTCTCGGTGTCCGCC ACCGTGTCGTCCTTCACCAACGGCGGCCTGCTCCCGACGAACGAGAGCATGGCGGTGTTC GCCGCGAACCGGGGCCTGCTGCTGTTGCTCGCGGGGCAGATCCTGGCAGGCTGCACGCTG CTGCCGGTGTTCCTCAGGCTGGCGGTAGGCGCCACGAGATGGGTGGCGAGAGCGGTGTCC GCGGGGCGAGGAGGGCACGACGAGGAGCTCGAGCCCGTGAGCGTGGACCGGAGCGCCGCC GCCGCGGGCTTCGGCCACCTGCTGCCGTCCGTCCCGCGGGCGGCGTCCCTCGCCGCCACG GTGGTCGCCGTCGCGGCCGCCGCCGCGGCGCTCCTCTGCTGCATGAACTGGAACTCCGCG GTGTTCGCGGGGCTCACGCCCGGCGAGAAGGTCACCAACGCCGTGTTCATGGCCGTCAAC GTGCGGCAGGCCGGGGAGAACTCCGTCGACTGCTCCCTCGTCGCGCCGGCCGTGCTGGTG CTGTTCCTCGCCATGATGTGCATCCCGGCGTCAGCGACATTGCTGTCCGTGCACGACAGC GGCAGCGACAGGAAGAGGAGCGGCGCTGGAGAAGCAGAACGCAAGGATGGGACGGAGAAG AAGAGAAGACTGTCGCTGAACAGCATGCTGCTGTCGCCGCTGGCCTGCAACGCCGCAGCG GTGATGCTCGCCTGCGTCACCGAGAGGCGATCGATCGCCGGCGACCCGCTCAACTTCTCC ACGTTCAACGTGATCTTCGAGGTGGTCAGTGCTTATGGCAACGTGGGGCTGTCCACTGGC TACGCCTGCTCGAGGCTGCTGCCCGCGGCGGCGGAGGCGACCACCGCTTGCCATGACAAG CCGTACAGCTTCTCTGGGTGGTGGAGCGACCAGGGGAAGCTGCTCCTGGTTCTCCTCATG CTCTACGGGAGGCTCAAATGCTTTCACGGACAGCGACGCAGGGGGTGA

Peptide Sequence

PEP ID	Zm00001d014680_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:58716795:58719001:-1 gene:Zm00001d014680 transcript:Zm00001d014680_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sodium transporter HKT1
Sequence	MPVRLHVLASTARHAASSSALVFRLVAFRLTPLLLHLSYFLAIDLLGFLALVLLRRSSPA AGAYRPRYVDVLFMSTSAVTVTGLATVEMEDLSASQLVVLTLLMLLGSEVFVSVLGLVLE SSRQQRQQRGQSRRQDHAGRVIRPSSVTAAVRDEPDLEEAGNNINSQAPPSSSEDSSGDG DNHKERCRAVRSLALVLSAYMAAVLVAGSVLVFAYVATVPAARDVLARKRLGAALFSVSA TVSSFTNGGLLPTNESMAVFAANRGLLLLLAGQILAGCTLLPVFLRLAVGATRWVARAVS AGRGGHDEELEPVSVDRSAAAAGFGHLLPSVPRAASLAATVVAVAAAAAALLCCMNWNSA VFAGLTPGEKVTNAVFMAVNVRQAGENSVDCSLVAPAVLVLFLAMMCIPASATLLSVHDS GSDRKRSGAGEAERKDGTEKKRRLSLNSMLLSPLACNAAAVMLACVTERRSIAGDPLNFS TFNVIFEVVSAYGNVGLSTGYACSRLLPAAAEATTACHDKPYSFSGWWSDQGKLLLVLLM LYGRLKCFHGQRRRG

Transcript Sequence

Transcript ID	Zm00001d014680_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:58716795:58719001:-1 gene:Zm00001d014680 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sodium transporter HKT1
Sequence	CAGAGAGCTAGATCATCAGGCGCTGCTCATTGCCACCGTCCACTAGTCACATCCGATCCG ATGCCTGTCCGGCTCCATGTCTTGGCCAGCACCGCGAGGCACGCCGCCAGCTCGTCAGCG CTCGTCTTCCGGCTCGTCGCCTTCCGCCTCACCCCGCTTCTGCTCCACCTGTCCTACTTC CTCGCCATCGACCTGCTCGGCTTCCTCGCCCTGGTGCTGCTCAGGCGAAGCAGCCCCGCC GCGGGGGCGTACCGTCCGCGCTACGTCGACGTGCTCTTCATGTCCACGTCCGCGGTCACG GTCACCGGGCTGGCCACCGTCGAGATGGAGGACCTGTCCGCCTCCCAGCTCGTCGTCCTC ACCCTCCTCATGCTCCTGGGCAGCGAGGTGTTCGTCTCCGTGCTCGGCCTCGTCCTCGAG TCGTCGCGCCAGCAGCGACAGCAGCGCGGTCAGTCTCGTCGTCAGGATCACGCCGGCAGG GTAATAAGGCCGTCGTCGGTCACGGCCGCCGTCCGCGACGAGCCGGACCTCGAAGAGGCG GGTAATAATATTAATAGCCAGGCGCCTCCGTCGTCGTCTGAGGACTCGTCCGGCGACGGT GACAACCACAAAGAGAGATGCCGCGCCGTCAGAAGCCTAGCGCTCGTGCTCTCGGCCTAC ATGGCCGCGGTCCTCGTCGCCGGCTCCGTGCTGGTCTTCGCGTACGTGGCCACCGTCCCG GCCGCGCGCGACGTGCTGGCGAGGAAGCGCCTCGGCGCCGCGCTCTTCTCGGTGTCCGCC ACCGTGTCGTCCTTCACCAACGGCGGCCTGCTCCCGACGAACGAGAGCATGGCGGTGTTC GCCGCGAACCGGGGCCTGCTGCTGTTGCTCGCGGGGCAGATCCTGGCAGGCTGCACGCTG CTGCCGGTGTTCCTCAGGCTGGCGGTAGGCGCCACGAGATGGGTGGCGAGAGCGGTGTCC GCGGGGCGAGGAGGGCACGACGAGGAGCTCGAGCCCGTGAGCGTGGACCGGAGCGCCGCC GCCGCGGGCTTCGGCCACCTGCTGCCGTCCGTCCCGCGGGCGGCGTCCCTCGCCGCCACG GTGGTCGCCGTCGCGGCCGCCGCCGCGGCGCTCCTCTGCTGCATGAACTGGAACTCCGCG GTGTTCGCGGGGCTCACGCCCGGCGAGAAGGTCACCAACGCCGTGTTCATGGCCGTCAAC GTGCGGCAGGCCGGGGAGAACTCCGTCGACTGCTCCCTCGTCGCGCCGGCCGTGCTGGTG CTGTTCCTCGCCATGATGTGCATCCCGGCGTCAGCGACATTGCTGTCCGTGCACGACAGC GGCAGCGACAGGAAGAGGAGCGGCGCTGGAGAAGCAGAACGCAAGGATGGGACGGAGAAG AAGAGAAGACTGTCGCTGAACAGCATGCTGCTGTCGCCGCTGGCCTGCAACGCCGCAGCG GTGATGCTCGCCTGCGTCACCGAGAGGCGATCGATCGCCGGCGACCCGCTCAACTTCTCC ACGTTCAACGTGATCTTCGAGGTGGTCAGTGCTTATGGCAACGTGGGGCTGTCCACTGGC TACGCCTGCTCGAGGCTGCTGCCCGCGGCGGCGGAGGCGACCACCGCTTGCCATGACAAG CCGTACAGCTTCTCTGGGTGGTGGAGCGACCAGGGGAAGCTGCTCCTGGTTCTCCTCATG CTCTACGGGAGGCTCAAATGCTTTCACGGACAGCGACGCAGGGGGTGAACTTGATTTGGC GATGACCGATGATGATGGCCAATGCCGTGATAGTCCCGGTATCAAACTTGAAATCCTTGG AGATTCTATGGACGATAGTATATAAGATTGGAAATCCAAAGTGAAATGCGATCGGAAGAA GGATACACACTACATAGTGAAATATGATTTTAGAATAGAGAGTAGTGTAGGTTTTTCTAG AGCTCATAGATACGGTGATACAGGATGATATCCGGTACACGTGAAGTGCTGATGCACATG CGCACATACC