Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014674_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:5:58597635:58609068:-1 gene:Zm00001d014674 gene_biotype:protein_coding transcript_biotype:protein_coding description:UDP-sugar pyrophosphorylase
Sequence

ATGGCTTCGGGCGCCGACGCCGCGGCGCTGGTGACCTCCGGCGCCGACGAGTGGGCAGCG
GCGTGTCCGCCGCTGCGGCGGAACCTGCAGCTGCTCGCGCCTGACGAGGTTGAGCTAGCA
AAAATGCTGTTGAATGAGGGCCAGATTCACCTATTTGAACACTGGCCTGAACCAGGCATT
GATGACGACAAGAAAAGAGGCTTCTTTGATCAGGTTCGCCGGCTTAATTCAAGCTATCCT
GGAGGTCTGGTATCTTACATCAAGAATGCCAAAAAACTTCTTGCAGATTCAAAGGCAGGA
AAAAACCCATATGATGGTTTCACCCCTTCTGTGCCTTCAGGGGAAATTTTGAACTTCGGC
GATGACAATTTTGTTTCACTGGAAGCAGCTGGGATAAAAGAAGCCCACAATGCTGCATTT
GTTCTTGTAGCTGGAGGGCTTGGTGAAAGGCTTGGTTACAAAGGAATTAAGGTAGCACTT
CCCCGGGAAACAACAACTGGAAAATGTTTCATTCAACATTATATAGAGTCTATCCTGGTT
TTACAAGAGGCCAGCTGCAAAACGGTTGATGATGGGTGCCAAAAAAAGATTCCATTTGTC
ATTATGACTTCTGATGATACAAATGCACTAACTATCAAGCTTTTGGAGTCAAACTCTTAC
TTTGGAATGGAACCATCTCAAGTGAAATTGCTAAAGCAGGAAAAAGTAGCTTGTCTAGCT
GACAATGATGCAAGGCTTGCATTAGACCCAAGTGACAAGTACAAAATTCAGACAAAGCCA
CATGGGCATGGAGATGTTCATTCTCTTCTTTATTCAAGTGGCTTGCTTGAGCAATGGAAG
AGTGAAGGGCGGAAGTGGGTTCTCTTTTTCCAGGATACAAATGGATTGCTTTTCAATGTT
TGTACACTGGCTTCCCTACTGCGTTATAATTTCACTGCAATTCCGTCTGCTTTAGGTGTC
AGTGCCACCAAGGGTTACAATGTAAATTCTCTCGCAGTTCCTAGGAAGGCTAAGGAAGCA
ATTGGAGGAATTACCAAACTTACTCATGTTGATGGTAGAACAATGGTCATCAATGTAGAG
TACAATCAGCTTGATCCACTCCTTCGTGCAACTGGTTATCCTGATGGAGATACAAATTCT
GAGACAGGCTATTCTCCATACCCTGGAAATATAAACCAGTTGATACTGGAGCTTGGACCA
TACATTGAGGAGCTAAAGAAAACGCATGGTGCCATTTCTGAATTTGTAAATCCCAAGTAT
ACTGATTCGACCAAGACATCATTTAAATCATCCACTCGTCTAGAGTGCATGATGCAAGAC
TATCCAAAGACGTTGCCACCCTCAACAAAAGTTGGATTCACGGTGATGGATACATGGCTT
GCTTATGCTCCTGTGAAGAATAATCCTGAAGACGCGGCTAAAGTTCCAAAAGGCAATCCT
TATCATAGTGCAACCTCAGGAGAGATGGCAATTTACAGGGCAAACAGCCTTATTTTGAGA
AAGGCTGGTGCGCAGATAGCTGACCCTGTCGTTGATACCTTCAACGGGCAAGAGGTAGAG
GTCTGGCCACGCGTAACCTGGAGTCCACGGTGGGGTCTCACCTTCCAGAGCGTCAAGGAG
AAAGTGCATGGCAGCTGTTCAGTTTCTCAGAGGTCAGCTTTGGTCATCGATGGCCGGAGT
GTCTTCCTCGACGGACTTTCATTGGACGGCACCCTTATTGTCAATGCTGTGGATGGTGCA
GAGGTTAAAGTTACTGGTCATGTAGAAAATAAGGGCTGGACTATCCGGCATGTGGACTAC
AAGGACACCTCGGAGAAGGAAGAGGTCAGGATCCGTGGGTTCAAGTTCAACAAGTCTGAG
CAGCTAGAGGTGAACTACACCGAGCCAGGAAAGCATAGCTTGAGTGCGTGA

Peptide Sequence

PEP ID

Zm00001d014674_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:5:58597635:58609068:-1 gene:Zm00001d014674 transcript:Zm00001d014674_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:UDP-sugar pyrophosphorylase
Sequence

MASGADAAALVTSGADEWAAACPPLRRNLQLLAPDEVELAKMLLNEGQIHLFEHWPEPGI
DDDKKRGFFDQVRRLNSSYPGGLVSYIKNAKKLLADSKAGKNPYDGFTPSVPSGEILNFG
DDNFVSLEAAGIKEAHNAAFVLVAGGLGERLGYKGIKVALPRETTTGKCFIQHYIESILV
LQEASCKTVDDGCQKKIPFVIMTSDDTNALTIKLLESNSYFGMEPSQVKLLKQEKVACLA
DNDARLALDPSDKYKIQTKPHGHGDVHSLLYSSGLLEQWKSEGRKWVLFFQDTNGLLFNV
CTLASLLRYNFTAIPSALGVSATKGYNVNSLAVPRKAKEAIGGITKLTHVDGRTMVINVE
YNQLDPLLRATGYPDGDTNSETGYSPYPGNINQLILELGPYIEELKKTHGAISEFVNPKY
TDSTKTSFKSSTRLECMMQDYPKTLPPSTKVGFTVMDTWLAYAPVKNNPEDAAKVPKGNP
YHSATSGEMAIYRANSLILRKAGAQIADPVVDTFNGQEVEVWPRVTWSPRWGLTFQSVKE
KVHGSCSVSQRSALVIDGRSVFLDGLSLDGTLIVNAVDGAEVKVTGHVENKGWTIRHVDY
KDTSEKEEVRIRGFKFNKSEQLEVNYTEPGKHSLSA

Transcript Sequence

Transcript ID

Zm00001d014674_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:58597635:58609068:-1 gene:Zm00001d014674 gene_biotype:protein_coding transcript_biotype:protein_coding description:UDP-sugar pyrophosphorylase
Sequence

GCGGTCCCCTCCCCTCCAACGACGGAAAACGGTTTGCCACTGCCTGGCCCGTGCGGCCGT
GCCCATATCCCCCGCGGAAGGACGACGACGCAACTGGCAGTCACCGACGCGACGCGGGTC
GTCTCCTCAGCCCTCCTGTTCAGCCTCCTCGCCAGCGATGGCTTCGGGCGCCGACGCCGC
GGCGCTGGTGACCTCCGGCGCCGACGAGTGGGCAGCGGCGTGTCCGCCGCTGCGGCGGAA
CCTGCAGCTGCTCGCGCCTGACGAGGTTGAGCTAGCAAAAATGCTGTTGAATGAGGGCCA
GATTCACCTATTTGAACACTGGCCTGAACCAGGCATTGATGACGACAAGAAAAGAGGCTT
CTTTGATCAGGTTCGCCGGCTTAATTCAAGCTATCCTGGAGGTCTGGTATCTTACATCAA
GAATGCCAAAAAACTTCTTGCAGATTCAAAGGCAGGAAAAAACCCATATGATGGTTTCAC
CCCTTCTGTGCCTTCAGGGGAAATTTTGAACTTCGGCGATGACAATTTTGTTTCACTGGA
AGCAGCTGGGATAAAAGAAGCCCACAATGCTGCATTTGTTCTTGTAGCTGGAGGGCTTGG
TGAAAGGCTTGGTTACAAAGGAATTAAGGTAGCACTTCCCCGGGAAACAACAACTGGAAA
ATGTTTCATTCAACATTATATAGAGTCTATCCTGGTTTTACAAGAGGCCAGCTGCAAAAC
GGTTGATGATGGGTGCCAAAAAAAGATTCCATTTGTCATTATGACTTCTGATGATACAAA
TGCACTAACTATCAAGCTTTTGGAGTCAAACTCTTACTTTGGAATGGAACCATCTCAAGT
GAAATTGCTAAAGCAGGAAAAAGTAGCTTGTCTAGCTGACAATGATGCAAGGCTTGCATT
AGACCCAAGTGACAAGTACAAAATTCAGACAAAGCCACATGGGCATGGAGATGTTCATTC
TCTTCTTTATTCAAGTGGCTTGCTTGAGCAATGGAAGAGTGAAGGGCGGAAGTGGGTTCT
CTTTTTCCAGGATACAAATGGATTGCTTTTCAATGTTTGTACACTGGCTTCCCTACTGCG
TTATAATTTCACTGCAATTCCGTCTGCTTTAGGTGTCAGTGCCACCAAGGGTTACAATGT
AAATTCTCTCGCAGTTCCTAGGAAGGCTAAGGAAGCAATTGGAGGAATTACCAAACTTAC
TCATGTTGATGGTAGAACAATGGTCATCAATGTAGAGTACAATCAGCTTGATCCACTCCT
TCGTGCAACTGGTTATCCTGATGGAGATACAAATTCTGAGACAGGCTATTCTCCATACCC
TGGAAATATAAACCAGTTGATACTGGAGCTTGGACCATACATTGAGGAGCTAAAGAAAAC
GCATGGTGCCATTTCTGAATTTGTAAATCCCAAGTATACTGATTCGACCAAGACATCATT
TAAATCATCCACTCGTCTAGAGTGCATGATGCAAGACTATCCAAAGACGTTGCCACCCTC
AACAAAAGTTGGATTCACGGTGATGGATACATGGCTTGCTTATGCTCCTGTGAAGAATAA
TCCTGAAGACGCGGCTAAAGTTCCAAAAGGCAATCCTTATCATAGTGCAACCTCAGGAGA
GATGGCAATTTACAGGGCAAACAGCCTTATTTTGAGAAAGGCTGGTGCGCAGATAGCTGA
CCCTGTCGTTGATACCTTCAACGGGCAAGAGGTAGAGGTCTGGCCACGCGTAACCTGGAG
TCCACGGTGGGGTCTCACCTTCCAGAGCGTCAAGGAGAAAGTGCATGGCAGCTGTTCAGT
TTCTCAGAGGTCAGCTTTGGTCATCGATGGCCGGAGTGTCTTCCTCGACGGACTTTCATT
GGACGGCACCCTTATTGTCAATGCTGTGGATGGTGCAGAGGTTAAAGTTACTGGTCATGT
AGAAAATAAGGGCTGGACTATCCGGCATGTGGACTACAAGGACACCTCGGAGAAGGAAGA
GGTCAGGATCCGTGGGTTCAAGTTCAACAAGTCTGAGCAGCTAGAGGTGAACTACACCGA
GCCAGGAAAGCATAGCTTGAGTGCGTGAAAAGAAAACATTCTTGACCTGACTAGCTTCGT
ACCAAAATGGAAATAGCTCACATCTGGGTCGCCTCCCAGATTCTGGGAGGGAGGCCAATG
CCAGCGTAGCTGAAACCGTTCTTCTCCTTCCCCCACGTACAACAAGGAGCAAAGTGCTTC
ACCAAGCACTCAACATTCTTTATGTATATCTTGTACAGAACTCCTCTTCAGTGCAATCAG
AGTTCATTGTTTGTTTGGGATCTGATGTTTATGTTACAATTTTTTATTTTAGAAAACTTG
GCACTG