Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014655_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:57566397:57574167:-1 gene:Zm00001d014655 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serrate RNA effector molecule
Sequence

ATGATGCTTCCGTCATCTACTATCTCGTGTATCAGTCCCCGCCGGCTTCCGTCCCCAATT
ACTCGCTCAAACCCTAGCCCCACCGCGCGAATGGCCGATGTGCTTGACCCGGCCTCCGAC
GCGCCGCGCGCGCGCCGTCCGCCGCCACCTCCCCCGGATAGCCCGGAGGACCGCTCGCCG
CAGCTGCCCCCGCCTCCACCCGGGGGCCCCCCGGCGGCGAGCCGGAAGCGGAGTCGCTCT
CCGCCGCCGCCGCCGCCGCCTCCGCTGGGTTCGTCCCGGCCCCAAAGGTATCGGGACCAC
CGCAGCGGCGGAGGGCGGGGCGGGAGCAGCCCCAGCCCGCCGCCGTACCGGGGCAGCCGC
CGCCACTCGCCGTCCAGGAGATCCCCGTCGCCGCCATTCAAGCGGTCGCGGAGGGACGAC
GGGTACGACCGCCGCGGGGGCCGCGGGAGCCCGCCGCGTTACGGGTACGATGATAGGAGG
CGAGGTTATGACCATGAGCGAGGTGGCGGCAGAGGTGGGTATGAAGATGACAGGAACCAG
GGCAGATATCTGAACCGTGCTCCAGATTGGCCTGATTCGGGGTACGGAGCGGCCAATGAT
GGTCCAGGGGTCACCCAAAGGGAAGGTTTGATGACATACAAACAGTTCATGCAAGTTCTT
GAGGATGATATTTCACCAAGTGAAGCTGAACGCAGGTACCAAGAGTATAGAACTGAGTAT
ATCACTACTCAGAAACGTGCTTATTTTGATCTCCACAAGAATGAAGATTGGTTAAAAGAC
AAGTACCACCCAACTAACTTGTTGTCTGTTATCGAAAGGAGGAATGAACGTTGCAAGGTT
ATAGCAAAGGATTTCTTTCTTGATTTGCAGAATGGAACTCTGGACCTAGGCCCTGGAATA
ACTGCCGGTGCAGCAAGTAAACTAGGTGGTAGTGATGGAAATTCTGAGGATGACATGGAC
AATGACAAGAGAAGAAAGCATGGCAAAGATTCCTCAAAAGCAACTGATTCTCTTTCTGGT
GCCCCCAAGGCTCATCCAGTTAGTTCTGAATCACGTCGAGTCCAAGCTGACATAGAGCAA
ACTCTAGCTCTCGTGCGTAAGCTTGATGCTGAGAAGGGCATTGATGGCAATGTACTGTCA
AGTGGTGATCATGACAAGTCAGATGTAGACAAATCACACATAGGATCTATGGGGCCTATA
GTTATAATCAGAGGTTTAACGACTGTCAAAGGCCTGGAAGGCGTTGAGCTCCTAGACACT
ATTCTTACCTATTTGTGGCGTATTCATGGTGTTGATTACTATGGCACATCAGAGTCGCAT
GAGGCCAAGGGCCTTCGTCACGTGAGAGTAGACAGTAAGACTTCTAGCACATCTGATGTC
AGTTCTGCTGATTGGGAGAAGAAGCTGGATACTTTCTGGCAGGAAAGACTGAATGGTCAG
GACCAGCTGGTCATACTTACTGCCAAGGACAAAATTGATGCAGCAGCTGCTGAAGTTTTA
GAACCTCTTGTCAGGAAAATCAGGGATGAAAAGTATGGATGGAAATATGGCTGTGGAGCC
AAGGGCTGTACAAAGCTTTTTCATGCTCCTGAGTTTGTTCACAAGCATTTGAAGCTCAAG
CATCCAGACCTTGTATTAGAGTCAACGTCAAAAGTTCGAGAGGATCTTTATTTTCAAAAT
TACATGAATGATCCTAACGCACCAGGTGGAACCCCAGTGATGCAACAGTCTGCACCAGAC
AGAGGAAGACGGAGACCTAGCATGGACAGTCGTCTGAAATTTGACCGTGGCAGTAACAGA
GACCATGATAAAGCTGATAGAGATGGAGTCAGGTATGGTAGAGGTGACCACTCTCCAAGC
CGTGATGGGCCTGATGATCAGATGTTTGATGGTTTCCGCGGACGGCCCTCGAATGCTCCT
TTTGTTGCTGAATTCCCAGCTCCACCGATATTGATGCCAGTACCTGGTGCTGGTCCCTTG
GGCCCATTTGTTCCTGCACCTCCAGAGATAGCGATGCATATGCTGAGAGAGCAAGGGCCA
CCTCCTCCTTTTGAACCAAATGGCGCACCACATGGCAATGCTGGAATGCTTGGGCCAATG
ATGGGTGGCCCAGCACCGATTATAGCTATGCCTCCAAATTTCCGCCATGATCCTCGCCGC
CTGAGAAGTTATAACGACCTCGATGCTCCTGATGAGGAAGTCACTGTCCTTGACTACAGA
AGCTTGTAG

Peptide Sequence

PEP ID

Zm00001d014655_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:57566397:57574167:-1 gene:Zm00001d014655 transcript:Zm00001d014655_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serrate RNA effector molecule
Sequence

MMLPSSTISCISPRRLPSPITRSNPSPTARMADVLDPASDAPRARRPPPPPPDSPEDRSP
QLPPPPPGGPPAASRKRSRSPPPPPPPPLGSSRPQRYRDHRSGGGRGGSSPSPPPYRGSR
RHSPSRRSPSPPFKRSRRDDGYDRRGGRGSPPRYGYDDRRRGYDHERGGGRGGYEDDRNQ
GRYLNRAPDWPDSGYGAANDGPGVTQREGLMTYKQFMQVLEDDISPSEAERRYQEYRTEY
ITTQKRAYFDLHKNEDWLKDKYHPTNLLSVIERRNERCKVIAKDFFLDLQNGTLDLGPGI
TAGAASKLGGSDGNSEDDMDNDKRRKHGKDSSKATDSLSGAPKAHPVSSESRRVQADIEQ
TLALVRKLDAEKGIDGNVLSSGDHDKSDVDKSHIGSMGPIVIIRGLTTVKGLEGVELLDT
ILTYLWRIHGVDYYGTSESHEAKGLRHVRVDSKTSSTSDVSSADWEKKLDTFWQERLNGQ
DQLVILTAKDKIDAAAAEVLEPLVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLKLK
HPDLVLESTSKVREDLYFQNYMNDPNAPGGTPVMQQSAPDRGRRRPSMDSRLKFDRGSNR
DHDKADRDGVRYGRGDHSPSRDGPDDQMFDGFRGRPSNAPFVAEFPAPPILMPVPGAGPL
GPFVPAPPEIAMHMLREQGPPPPFEPNGAPHGNAGMLGPMMGGPAPIIAMPPNFRHDPRR
LRSYNDLDAPDEEVTVLDYRSL

Transcript Sequence

Transcript ID

Zm00001d014655_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:57566397:57574167:-1 gene:Zm00001d014655 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serrate RNA effector molecule
Sequence

CCAGATTTCATGATGCTTCCGTCATCTACTATCTCGTGTATCAGTCCCCGCCGGCTTCCG
TCCCCAATTACTCGCTCAAACCCTAGCCCCACCGCGCGAATGGCCGATGTGCTTGACCCG
GCCTCCGACGCGCCGCGCGCGCGCCGTCCGCCGCCACCTCCCCCGGATAGCCCGGAGGAC
CGCTCGCCGCAGCTGCCCCCGCCTCCACCCGGGGGCCCCCCGGCGGCGAGCCGGAAGCGG
AGTCGCTCTCCGCCGCCGCCGCCGCCGCCTCCGCTGGGTTCGTCCCGGCCCCAAAGGTAT
CGGGACCACCGCAGCGGCGGAGGGCGGGGCGGGAGCAGCCCCAGCCCGCCGCCGTACCGG
GGCAGCCGCCGCCACTCGCCGTCCAGGAGATCCCCGTCGCCGCCATTCAAGCGGTCGCGG
AGGGACGACGGGTACGACCGCCGCGGGGGCCGCGGGAGCCCGCCGCGTTACGGGTACGAT
GATAGGAGGCGAGGTTATGACCATGAGCGAGGTGGCGGCAGAGGTGGGTATGAAGATGAC
AGGAACCAGGGCAGATATCTGAACCGTGCTCCAGATTGGCCTGATTCGGGGTACGGAGCG
GCCAATGATGGTCCAGGGGTCACCCAAAGGGAAGGTTTGATGACATACAAACAGTTCATG
CAAGTTCTTGAGGATGATATTTCACCAAGTGAAGCTGAACGCAGGTACCAAGAGTATAGA
ACTGAGTATATCACTACTCAGAAACGTGCTTATTTTGATCTCCACAAGAATGAAGATTGG
TTAAAAGACAAGTACCACCCAACTAACTTGTTGTCTGTTATCGAAAGGAGGAATGAACGT
TGCAAGGTTATAGCAAAGGATTTCTTTCTTGATTTGCAGAATGGAACTCTGGACCTAGGC
CCTGGAATAACTGCCGGTGCAGCAAGTAAACTAGGTGGTAGTGATGGAAATTCTGAGGAT
GACATGGACAATGACAAGAGAAGAAAGCATGGCAAAGATTCCTCAAAAGCAACTGATTCT
CTTTCTGGTGCCCCCAAGGCTCATCCAGTTAGTTCTGAATCACGTCGAGTCCAAGCTGAC
ATAGAGCAAACTCTAGCTCTCGTGCGTAAGCTTGATGCTGAGAAGGGCATTGATGGCAAT
GTACTGTCAAGTGGTGATCATGACAAGTCAGATGTAGACAAATCACACATAGGATCTATG
GGGCCTATAGTTATAATCAGAGGTTTAACGACTGTCAAAGGCCTGGAAGGCGTTGAGCTC
CTAGACACTATTCTTACCTATTTGTGGCGTATTCATGGTGTTGATTACTATGGCACATCA
GAGTCGCATGAGGCCAAGGGCCTTCGTCACGTGAGAGTAGACAGTAAGACTTCTAGCACA
TCTGATGTCAGTTCTGCTGATTGGGAGAAGAAGCTGGATACTTTCTGGCAGGAAAGACTG
AATGGTCAGGACCAGCTGGTCATACTTACTGCCAAGGACAAAATTGATGCAGCAGCTGCT
GAAGTTTTAGAACCTCTTGTCAGGAAAATCAGGGATGAAAAGTATGGATGGAAATATGGC
TGTGGAGCCAAGGGCTGTACAAAGCTTTTTCATGCTCCTGAGTTTGTTCACAAGCATTTG
AAGCTCAAGCATCCAGACCTTGTATTAGAGTCAACGTCAAAAGTTCGAGAGGATCTTTAT
TTTCAAAATTACATGAATGATCCTAACGCACCAGGTGGAACCCCAGTGATGCAACAGTCT
GCACCAGACAGAGGAAGACGGAGACCTAGCATGGACAGTCGTCTGAAATTTGACCGTGGC
AGTAACAGAGACCATGATAAAGCTGATAGAGATGGAGTCAGGTATGGTAGAGGTGACCAC
TCTCCAAGCCGTGATGGGCCTGATGATCAGATGTTTGATGGTTTCCGCGGACGGCCCTCG
AATGCTCCTTTTGTTGCTGAATTCCCAGCTCCACCGATATTGATGCCAGTACCTGGTGCT
GGTCCCTTGGGCCCATTTGTTCCTGCACCTCCAGAGATAGCGATGCATATGCTGAGAGAG
CAAGGGCCACCTCCTCCTTTTGAACCAAATGGCGCACCACATGGCAATGCTGGAATGCTT
GGGCCAATGATGGGTGGCCCAGCACCGATTATAGCTATGCCTCCAAATTTCCGCCATGAT
CCTCGCCGCCTGAGAAGTTATAACGACCTCGATGCTCCTGATGAGGAAGTCACTGTCCTT
GACTACAGAAGCTTGTAGGGTCCAGCACCTCCAGTGGTGAATTGGGCTTTTTTCTCTTTA
TGAAGGCAAAAGATGGAAGGTTATGTTCAATTAAACCAATTTTTGGGTCACCTGTAGTCT
GTTAGATTCTGTTGTAACTTGAATA