Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014626_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:56455238:56460704:-1 gene:Zm00001d014626 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal RNA processing Brix domain protein
Sequence

ATGCTACGGCGGAACATACGTCAGCGTCGGGAGTACCTGTACTCCAAGAGCCTCGAGGGC
CCCCAGCGGGCGCTGTTCGAGAAGAAGCGCCGGATCCGGGCGGCGCTCGAGGAGGGCAAG
CCCATCCCCACCGAGCTCCGCAACGAGGAGCACGACCTGCGGAGGCAGATCGACCTCGAG
GACCAGGAGCGTCAAGTTCCCAAGAGCATCGTTGACAACGAGTACGCTACTGCCACCATT
CGGGAGCCCAAGATACTATTGACCACTTCTCGCAATCCTAGCGCGCCCCTAACTCAGTTT
GTTAAGGAGCTCAAGGTTGTCTTCCCAAACTCACAAAGAATGAACCGTGGTGGACAGGTC
ATATCAGAAATTGTGGAGGCCTGCCGCTCACATGATATAACAGATCTTATTCTGGTCCAT
GAACACCGTGGTCAACCTGATGGTTTGATTGTCTCCCATCTACCACATGGTCCAACTGCA
TACTTTGGGTTGCTCAATGTGGTGACACGTCATGATATCAAGGACAGGAAGACGATGGGC
AAAATGTCAGAAGCTTACCCCCATTTAATACTGGACAACTTCTCAACCCAGATTGGCGAA
AGGACTGCAACTATTCTGAAGCACCTCTTTCCTGTCCCAAAGCCAGATTCAAAGCGAATA
ATTACATTTGCTAACAGAGACGATTACATCTCTTTCAGGCATCATGTATATGAAAAACCA
GGTGGCCCCAAATCGATTGACCTGAAGGAGGTCGGCCCCCGGTTCGAGTTGCGGCTGTAC
CAGATCAAACTAGGAACCGTGGAACAAAAGGAAGCGCAGAGCGAGTTTGTGCTGCGGCCC
TACATCAATACTGCCAAGAAGCAAAAGACGCTTGGAGCGTGA

Peptide Sequence

PEP ID

Zm00001d014626_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:56455238:56460704:-1 gene:Zm00001d014626 transcript:Zm00001d014626_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal RNA processing Brix domain protein
Sequence

MLRRNIRQRREYLYSKSLEGPQRALFEKKRRIRAALEEGKPIPTELRNEEHDLRRQIDLE
DQERQVPKSIVDNEYATATIREPKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQV
ISEIVEACRSHDITDLILVHEHRGQPDGLIVSHLPHGPTAYFGLLNVVTRHDIKDRKTMG
KMSEAYPHLILDNFSTQIGERTATILKHLFPVPKPDSKRIITFANRDDYISFRHHVYEKP
GGPKSIDLKEVGPRFELRLYQIKLGTVEQKEAQSEFVLRPYINTAKKQKTLGA

Transcript Sequence

Transcript ID

Zm00001d014626_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:56455238:56460704:-1 gene:Zm00001d014626 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal RNA processing Brix domain protein
Sequence

AGTGCCAGCCGCCTTGCGCTTGCCCTCTCTGCGACGACTGGGTGCGCCGCCGCCGCCGCT
GTCCTACGTCAGGTGTCGAAGCCTTCGCCGGCGAAGAGCGCTCACCAGATTATCCATCTA
CTAGATTCACCCCTGGTGGAGGAGGAGAAGAAGGTAAGCGAAGATGCTACGGCGGAACAT
ACGTCAGCGTCGGGAGTACCTGTACTCCAAGAGCCTCGAGGGCCCCCAGCGGGCGCTGTT
CGAGAAGAAGCGCCGGATCCGGGCGGCGCTCGAGGAGGGCAAGCCCATCCCCACCGAGCT
CCGCAACGAGGAGCACGACCTGCGGAGGCAGATCGACCTCGAGGACCAGGAGCGTCAAGT
TCCCAAGAGCATCGTTGACAACGAGTACGCTACTGCCACCATTCGGGAGCCCAAGATACT
ATTGACCACTTCTCGCAATCCTAGCGCGCCCCTAACTCAGTTTGTTAAGGAGCTCAAGGT
TGTCTTCCCAAACTCACAAAGAATGAACCGTGGTGGACAGGTCATATCAGAAATTGTGGA
GGCCTGCCGCTCACATGATATAACAGATCTTATTCTGGTCCATGAACACCGTGGTCAACC
TGATGGTTTGATTGTCTCCCATCTACCACATGGTCCAACTGCATACTTTGGGTTGCTCAA
TGTGGTGACACGTCATGATATCAAGGACAGGAAGACGATGGGCAAAATGTCAGAAGCTTA
CCCCCATTTAATACTGGACAACTTCTCAACCCAGATTGGCGAAAGGACTGCAACTATTCT
GAAGCACCTCTTTCCTGTCCCAAAGCCAGATTCAAAGCGAATAATTACATTTGCTAACAG
AGACGATTACATCTCTTTCAGGCATCATGTATATGAAAAACCAGGTGGCCCCAAATCGAT
TGACCTGAAGGAGGTCGGCCCCCGGTTCGAGTTGCGGCTGTACCAGATCAAACTAGGAAC
CGTGGAACAAAAGGAAGCGCAGAGCGAGTTTGTGCTGCGGCCCTACATCAATACTGCCAA
GAAGCAAAAGACGCTTGGAGCGTGAGCTACACTGCAGTACAGAACTTAATTTTTTTTTGG
TCTTCATCGTTTATGCTGTAGTAGCAACATTCACAGGGTGATTAGATCAATATCTGTCAA
TCTAATAGAAGCCGCAATGTACCCCTGACTCGAACCCAAGCTGGCTGACTTTTTTTTTTT
TGTCACGGATGTGGGTTCCACATGTCAGTCCTTTGTGTCTTCTTTTCTCTTCCATTGGTG
CGTTTCCTCTTAACACGTTATAGGACAGGCTTGCCGGTCTTTCGCGATGTGAGTGTGACG
ATGCCTGAAGCTCTTCAGCT