Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d014609_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:5:55126809:55131272:-1 gene:Zm00001d014609 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence	ATGGACGAATCTGCCTGTAGATCCACTGCCCCAGTTGGGTTTCTTAGAAGAGGTTCGGGC ATTTCCTTGAGAAATCAAAGCAATGAGGATAGGTCAAATCAGTACAACAAGCAGCCAGGG AAGAGTTCAAATCCCAATCCTGTAAAATTACGGTTCACTGAAAATAAAGAGAAACCAAGG TATTTTCAAGGGACATTTCATTCATCAGGCTCCAGGGCCTCATCTGTAAGCTCTTCAAAA GCTCCTGCTAGAAAATACTGCGACGAGAGACAGAAACAGCCCTTTTTGGCAGAGACAGAC ATTGCTGAAAGCAGTAACAGAAGAACTGAGGTTAGACGCCTACAAAGTGGCAAGAAAGCT TCTGTATTTGGTGATGGGCATCCATACACACAGAAGAGTATCTCAGAAGCTTCATCATCC TCAACAATTACTGGAGGCTTGCCAGAAGAGCATGATCTTGGAGCTTTATATGTTTCTGGT TCTTCAGGTAGTTCTGCACATCCAGTTAATCCCAGGAATGCTGCATTGAATGCTTCGGCA CATATGCAAAAGGATAAAGAAGAAATGAGTTCAGGTAGACCTCAAGGTGCTCCCACTTTT GTTCGTCGGCATACTTTACCTCAAAGTTTTTCCACTGGTGTCAAGTCACCAACTGCCCCT GGCACTGGAGCACAGAGACGTGGCCTCAAAAATCTTGGTTGCACTTCAATATCTGATGTT CTGCCTTCAGGATGCTCTTCATCTGATTCTGCTCGTGATAGGAGAATCGAAGTTACAAAG AAGAGAACTTCTGGTGCAGGAAGTTCTTCAAGATCAAGGATAAGTGAACAATCTAATTTC AGTCAGCCACGTGCTAGTTATCCTGGCAGTACTGGTCCTAGAGCTAGAGCTGCTGAACAA TCAGCTTCTCAACAAACAGCAAGGACCAATAGCCGAAATATTCCGGATCATACAGATTCA ATAAGGACTAGACGACCTTTTACTCTACGTGCCAGGGAGAGGATGATGCCAGGTGAAAGG GAGGACAGTGTATTTGCTCTGCATGAGACTGTTGCAAGCATTCATCCAGAATGCGGACAT TTTCACATGGATGGTACTCCCCCAGAGAGATTAGGAAGACCCTTTTATGCAGAACTACCT CATGCAATTTATTCATCTAATCGTCAAGGATCAAGTAGTCAGACAGCAAGGAGAAGATCT ACGTCTCGTACTGAAGAAAGCCCTCAACGGATGTTTCATGGTATGTTTTGGGAGAGAGAT GGCTACAGGGGGATAAACATGGAAGGAATTGCACAGGCGTTGCTAGCATTGGATAGGATT GAACATGATGTTGAATTGACTTATGAGCAACTGCTTCTGCTAGAAACTAATCTGCTCTTA AGTGGCCTTGATTTGCACGATCAACATGAAGATATGAGATTGGATATCGACAATATGTCT TATGAGGAACTGCTTGCTTTGGAAGAGCATATTGGCTCAGTGACTACTGCCCTTACTGAA GAGCAATTTACCAAGTGTGTAAACCAAAGTGTGTATGAAGCAAGAAATTCTTATAGAGAT GTAAGCAAGATCGCAGCAGATGATGTGAAATGTAGCGTATGTCAGGAGGAATACGTTGAT GGTGAAGAGATTGGTACAATGCAATGTGAACATCAGTACCATGTGCGCTGCATTCACGAA TGGCTTAAGCAGAAGAATTGGTGTCCAATATGCAAAGCTTCAGCTATACCTTCAGAGATG ACCAAGGGAGACGCATGA

Peptide Sequence

PEP ID	Zm00001d014609_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:5:55126809:55131272:-1 gene:Zm00001d014609 transcript:Zm00001d014609_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence	MDESACRSTAPVGFLRRGSGISLRNQSNEDRSNQYNKQPGKSSNPNPVKLRFTENKEKPR YFQGTFHSSGSRASSVSSSKAPARKYCDERQKQPFLAETDIAESSNRRTEVRRLQSGKKA SVFGDGHPYTQKSISEASSSSTITGGLPEEHDLGALYVSGSSGSSAHPVNPRNAALNASA HMQKDKEEMSSGRPQGAPTFVRRHTLPQSFSTGVKSPTAPGTGAQRRGLKNLGCTSISDV LPSGCSSSDSARDRRIEVTKKRTSGAGSSSRSRISEQSNFSQPRASYPGSTGPRARAAEQ SASQQTARTNSRNIPDHTDSIRTRRPFTLRARERMMPGEREDSVFALHETVASIHPECGH FHMDGTPPERLGRPFYAELPHAIYSSNRQGSSSQTARRRSTSRTEESPQRMFHGMFWERD GYRGINMEGIAQALLALDRIEHDVELTYEQLLLLETNLLLSGLDLHDQHEDMRLDIDNMS YEELLALEEHIGSVTTALTEEQFTKCVNQSVYEARNSYRDVSKIAADDVKCSVCQEEYVD GEEIGTMQCEHQYHVRCIHEWLKQKNWCPICKASAIPSEMTKGDA

Transcript Sequence

Transcript ID	Zm00001d014609_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:55126809:55131272:-1 gene:Zm00001d014609 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence	TCCCTCCCTTCTTCGATTGCCGTCTTCTCTGGCTTCCATTTTCGCGAGGAGGCGAGGTGG ACAGAGACGCCGCCGCCGCTTCCGCTTCGACCTCGACCTCGGCTTCGGCTTCCACGAGCA GGGAGGTTTTCTCTCCGGAGATCGGAAGTAATACCCATGCGCCGGAGTTCAGAGGTAGAG TTGCGGAATGAAGTTTCGTGGTCGGCGTCCTCTTAAACTGTTCAGAGACCACTCACGTTC ATTCCGCGATTGAAGAATTTCGATAGTGCTATACAGTATATCGCAACGTATTTTCATCCG ACGCATCCAATTCTAGCAAGTCTTCTGGAGAATATAATCCACATCTGTTTATTTTGCTGC ATTTTGGTATGGACGAATCTGCCTGTAGATCCACTGCCCCAGTTGGGTTTCTTAGAAGAG GTTCGGGCATTTCCTTGAGAAATCAAAGCAATGAGGATAGGTCAAATCAGTACAACAAGC AGCCAGGGAAGAGTTCAAATCCCAATCCTGTAAAATTACGGTTCACTGAAAATAAAGAGA AACCAAGGTATTTTCAAGGGACATTTCATTCATCAGGCTCCAGGGCCTCATCTGTAAGCT CTTCAAAAGCTCCTGCTAGAAAATACTGCGACGAGAGACAGAAACAGCCCTTTTTGGCAG AGACAGACATTGCTGAAAGCAGTAACAGAAGAACTGAGGTTAGACGCCTACAAAGTGGCA AGAAAGCTTCTGTATTTGGTGATGGGCATCCATACACACAGAAGAGTATCTCAGAAGCTT CATCATCCTCAACAATTACTGGAGGCTTGCCAGAAGAGCATGATCTTGGAGCTTTATATG TTTCTGGTTCTTCAGGTAGTTCTGCACATCCAGTTAATCCCAGGAATGCTGCATTGAATG CTTCGGCACATATGCAAAAGGATAAAGAAGAAATGAGTTCAGGTAGACCTCAAGGTGCTC CCACTTTTGTTCGTCGGCATACTTTACCTCAAAGTTTTTCCACTGGTGTCAAGTCACCAA CTGCCCCTGGCACTGGAGCACAGAGACGTGGCCTCAAAAATCTTGGTTGCACTTCAATAT CTGATGTTCTGCCTTCAGGATGCTCTTCATCTGATTCTGCTCGTGATAGGAGAATCGAAG TTACAAAGAAGAGAACTTCTGGTGCAGGAAGTTCTTCAAGATCAAGGATAAGTGAACAAT CTAATTTCAGTCAGCCACGTGCTAGTTATCCTGGCAGTACTGGTCCTAGAGCTAGAGCTG CTGAACAATCAGCTTCTCAACAAACAGCAAGGACCAATAGCCGAAATATTCCGGATCATA CAGATTCAATAAGGACTAGACGACCTTTTACTCTACGTGCCAGGGAGAGGATGATGCCAG GTGAAAGGGAGGACAGTGTATTTGCTCTGCATGAGACTGTTGCAAGCATTCATCCAGAAT GCGGACATTTTCACATGGATGGTACTCCCCCAGAGAGATTAGGAAGACCCTTTTATGCAG AACTACCTCATGCAATTTATTCATCTAATCGTCAAGGATCAAGTAGTCAGACAGCAAGGA GAAGATCTACGTCTCGTACTGAAGAAAGCCCTCAACGGATGTTTCATGGTATGTTTTGGG AGAGAGATGGCTACAGGGGGATAAACATGGAAGGAATTGCACAGGCGTTGCTAGCATTGG ATAGGATTGAACATGATGTTGAATTGACTTATGAGCAACTGCTTCTGCTAGAAACTAATC TGCTCTTAAGTGGCCTTGATTTGCACGATCAACATGAAGATATGAGATTGGATATCGACA ATATGTCTTATGAGGAACTGCTTGCTTTGGAAGAGCATATTGGCTCAGTGACTACTGCCC TTACTGAAGAGCAATTTACCAAGTGTGTAAACCAAAGTGTGTATGAAGCAAGAAATTCTT ATAGAGATGTAAGCAAGATCGCAGCAGATGATGTGAAATGTAGCGTATGTCAGGAGGAAT ACGTTGATGGTGAAGAGATTGGTACAATGCAATGTGAACATCAGTACCATGTGCGCTGCA TTCACGAATGGCTTAAGCAGAAGAATTGGTGTCCAATATGCAAAGCTTCAGCTATACCTT CAGAGATGACCAAGGGAGACGCATGAATCTTGGCCCAAACTTGTAAATAGCGTGGATTTA TTATTAGACATTGTAGATGCTGACGCAGTTCACCCCAATATGTGGATACGATAGTCTCTC CCGAACGGTCGAACGCCTGGAACCTTTTGTTACTGCATCTTTTATCTTCTTAGCACACCC TTGCTGCTTGACAGCAGTACGGGTCAGAAACTCGAAAATAACCGTGGTTCTCAAGAAATT TTTCCAGATTCTAAATATGAAATTGTTCTCCTTGATTGAAATGTTGGGTTACATGGTTT