Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d014575_T014
CDS Infomation	cds chromosome:B73_RefGen_v4:5:54058804:54067786:-1 gene:Zm00001d014575 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA polymerase I specific transcription initiation factor RRN3 protein
Sequence	ATGGGGGCGGAGCAGGGGTACGAAGATATGCAGGGGACCTTCAGGGACTCCGAGGTGTTC GAGTTTGTCGGGAAAGTCCTGCAGTCCGTGCGGATGGATCCGTTTTTAATTGACATAAGG GACAAAGATTATTATGATTACATGCTAGGCATTATAGACCCTACCAAGAAAAGGAGTACA GATGATGAAGCTATGTTTGTTACTATTTTGAGGGCACTATCACAAGCAGTATCCAAGATA GACACCGTGTATCATCATGCACTTCTACACAATATATTTACCATGTGTGTCTGGCACTTG CACAGTGACACGAGGGTGGTGTTTTTGGATTTAATAACCAGATTGGCTGCTGTGGCAGAC CAATATCTCAGAGAATGTTTGCAGATGCTTGTGAATAATTTCACTCCACCTGGACCCCTC ATTCGTTACATTGAGGAGCCAAGGTGGCTTCCAAAGAAGGAAAAAATCTACTCTCAGTTG CAAGAGAGTTTGAAAATGATTTCTGACACTGTGCCCTTGGCACCAAGGATGTTAAAGGAT ATAATTGATAGGAGTATGCCAAAGTTGTTTGATAGCAAAGCTAAGATGGTATCATTTGTC AAGTGCATGTTGGGACTTGATGCTGTTGTTTGGGACATTATTGGGTCGTCATTGTTGGAG AAAGTTGTGTACCTACTTACAGAATTGGATGTTAATATAACATGGGAAGATATTCTTCAA GATGAACACAACAAAGGTATATTTGACATGGAGCTTGAGGATTTGGCTGAGGATGAAGAT AACCTTGGTCAAGAAGGAACAAAGGTCCATTTTGGAGGAAATATGTGTGCCGAGAAACTT GATGGTTTAATGGTGGTTGTGTGTGAGCACCTCAAGTCACGTGTAGAAGAACCTGAGCGC CTAATTAAGGAATTTGTCACTTTGAAGGCTATATTTAAATCACATGTGCTGAGGGTGCAC AAATCCAAATTTGCACAGTTTATCATGTTTTATGCTTGTTCCCTGCATCCTGAGATTGGC GATGGCTTTGCTAATTTTCTTACTGATATTTTTATTGACAAGGACAAAAACGAGGATGCA ATTACTAGAGTGTCTGCAGTTTCATATGTTGGAAGCTATCTGTCCCGGGCAAGGTTCATT TCCGTAAATATAGTTGTTTCTGTACTCAAAAGGCTAGTGGACTGGTGTGATTATTATTGT GGCCATCAGCTGGACAATGGGGTGACAGCAAATCCTATAAAGCACCAGCTATTTTATGCT AGCTGCCAGGCTGTGATGTATGTCCTATGCTTTCGGTTAAGATCTATTATGGACTACCCA AATCTTAAACAACAACTTTTTCGAATGCGAATCCGGGATATCTTGGTCCACCCATTGCAG CCATTAAAGGTGTGCTTGCCTTCAATAGTGAATGAGTTCCTGAGACAGGCTACAGCTGCG AGCCTGTTCCATGCACCTGCGATCTCAATGCACGAAGATGCAGTTGAATCCGATCTATCG AAGGCATTTGGAGGACTTAATAGGCTTGACATGTTCTTCCCATTTGACCCGTATCTACTT AAAGAGTCTGACAGATATATACGGCCAAATTTTGAGTTCTGGTCCTTGGTCAAGACGACA TACAGTAACGACAACAGCGATGAGGACGACGAAGAGCTTGGCGACATTGACGCACCTGGA ATGAATGTGGGCAGCTTGGATGATCACTTCGAAATAGATTTTAACAGTGACGATGACATT GAGTATAAGATGAATAAGATGTCCATAACGCCGCAACGCACTTTCTACCATCCACTGGCT ACAAACAGTGAGTCCAACCGCATGCCTGCGAGGATCAGACCTTCAGTGAGCCCCCCATCA TAG

Peptide Sequence

PEP ID	Zm00001d014575_P014
PEP Infomation	pep chromosome:B73_RefGen_v4:5:54058804:54067786:-1 gene:Zm00001d014575 transcript:Zm00001d014575_T014 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA polymerase I specific transcription initiation factor RRN3 protein
Sequence	MGAEQGYEDMQGTFRDSEVFEFVGKVLQSVRMDPFLIDIRDKDYYDYMLGIIDPTKKRST DDEAMFVTILRALSQAVSKIDTVYHHALLHNIFTMCVWHLHSDTRVVFLDLITRLAAVAD QYLRECLQMLVNNFTPPGPLIRYIEEPRWLPKKEKIYSQLQESLKMISDTVPLAPRMLKD IIDRSMPKLFDSKAKMVSFVKCMLGLDAVVWDIIGSSLLEKVVYLLTELDVNITWEDILQ DEHNKGIFDMELEDLAEDEDNLGQEGTKVHFGGNMCAEKLDGLMVVVCEHLKSRVEEPER LIKEFVTLKAIFKSHVLRVHKSKFAQFIMFYACSLHPEIGDGFANFLTDIFIDKDKNEDA ITRVSAVSYVGSYLSRARFISVNIVVSVLKRLVDWCDYYCGHQLDNGVTANPIKHQLFYA SCQAVMYVLCFRLRSIMDYPNLKQQLFRMRIRDILVHPLQPLKVCLPSIVNEFLRQATAA SLFHAPAISMHEDAVESDLSKAFGGLNRLDMFFPFDPYLLKESDRYIRPNFEFWSLVKTT YSNDNSDEDDEELGDIDAPGMNVGSLDDHFEIDFNSDDDIEYKMNKMSITPQRTFYHPLA TNSESNRMPARIRPSVSPPS

Transcript Sequence

Transcript ID	Zm00001d014575_T014
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:54058804:54067786:-1 gene:Zm00001d014575 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA polymerase I specific transcription initiation factor RRN3 protein
Sequence	GGAGGCATCCTGTTCCACGCGACTCATCCCGTCGTCCGCCGAGCCGCCGACGCCACGCCA GGCCTCCACGCCGCGCCTCCGAGCGCCCAGGCTGAGGCGCCGCCTACCCGAGCTCCGCCC AGGCCGCCCGCCCGCTCGGCAGGACGACTGGACGAGCTCCTCGCCGCGGGCGCCGAGCAG AGGAGCTCCTCTCGCGGAAGCGCGGACCCGCCTTCAGGCCGAGGTGCCGAGCTCCGCCCC GCCCCGCGCGGCCGCGCCCCTGCCCAGGTCCAGCCGCCCCGCTCGGCTCCTGTTCCCCGC TGGGGTTCCGGCACAAAGCTCCACGGCTCCGCATCCCATTGCTGAGATTCTTCCCGTGAG GAGGTGTTGGGGGTAGCTGGCGATGGGGGCGGAGCAGGGGTACGAAGATATGCAGGGGAC CTTCAGGGACTCCGAGGTGTTCGAGTTTGTCGGGAAAGTCCTGCAGTCCGTGCGGATGGA TCCGTTTTTAATTGACATAAGGGACAAAGATTATTATGATTACATGCTAGGCATTATAGA CCCTACCAAGAAAAGGAGTACAGATGATGAAGCTATGTTTGTTACTATTTTGAGGGCACT ATCACAAGCAGTATCCAAGATAGACACCGTGTATCATCATGCACTTCTACACAATATATT TACCATGTGTGTCTGGCACTTGCACAGTGACACGAGGGTGGTGTTTTTGGATTTAATAAC CAGATTGGCTGCTGTGGCAGACCAATATCTCAGAGAATGTTTGCAGATGCTTGTGAATAA TTTCACTCCACCTGGACCCCTCATTCGTTACATTGAGGAGCCAAGGTGGCTTCCAAAGAA GGAAAAAATCTACTCTCAGTTGCAAGAGAGTTTGAAAATGATTTCTGACACTGTGCCCTT GGCACCAAGGATGTTAAAGGATATAATTGATAGGAGTATGCCAAAGTTGTTTGATAGCAA AGCTAAGATGGTATCATTTGTCAAGTGCATGTTGGGACTTGATGCTGTTGTTTGGGACAT TATTGGGTCGTCATTGTTGGAGAAAGTTGTGTACCTACTTACAGAATTGGATGTTAATAT AACATGGGAAGATATTCTTCAAGATGAACACAACAAAGGTATATTTGACATGGAGCTTGA GGATTTGGCTGAGGATGAAGATAACCTTGGTCAAGAAGGAACAAAGGTCCATTTTGGAGG AAATATGTGTGCCGAGAAACTTGATGGTTTAATGGTGGTTGTGTGTGAGCACCTCAAGTC ACGTGTAGAAGAACCTGAGCGCCTAATTAAGGAATTTGTCACTTTGAAGGCTATATTTAA ATCACATGTGCTGAGGGTGCACAAATCCAAATTTGCACAGTTTATCATGTTTTATGCTTG TTCCCTGCATCCTGAGATTGGCGATGGCTTTGCTAATTTTCTTACTGATATTTTTATTGA CAAGGACAAAAACGAGGATGCAATTACTAGAGTGTCTGCAGTTTCATATGTTGGAAGCTA TCTGTCCCGGGCAAGGTTCATTTCCGTAAATATAGTTGTTTCTGTACTCAAAAGGCTAGT GGACTGGTGTGATTATTATTGTGGCCATCAGCTGGACAATGGGGTGACAGCAAATCCTAT AAAGCACCAGCTATTTTATGCTAGCTGCCAGGCTGTGATGTATGTCCTATGCTTTCGGTT AAGATCTATTATGGACTACCCAAATCTTAAACAACAACTTTTTCGAATGCGAATCCGGGA TATCTTGGTCCACCCATTGCAGCCATTAAAGGTGTGCTTGCCTTCAATAGTGAATGAGTT CCTGAGACAGGCTACAGCTGCGAGCCTGTTCCATGCACCTGCGATCTCAATGCACGAAGA TGCAGTTGAATCCGATCTATCGAAGGCATTTGGAGGACTTAATAGGCTTGACATGTTCTT CCCATTTGACCCGTATCTACTTAAAGAGTCTGACAGATATATACGGCCAAATTTTGAGTT CTGGTCCTTGGTCAAGACGACATACAGTAACGACAACAGCGATGAGGACGACGAAGAGCT TGGCGACATTGACGCACCTGGAATGAATGTGGGCAGCTTGGATGATCACTTCGAAATAGA TTTTAACAGTGACGATGACATTGAGTATAAGATGAATAAGATGTCCATAACGCCGCAACG CACTTTCTACCATCCACTGGCTACAAACAGTGAGTCCAACCGCATGCCTGCGAGGATCAG ACCTTCAGTGAGCCCCCCATCATAGCAAGGTTCTGCTCAGCTCTTTACTTGACTGATGAT GACACAAAATCAGATGCTAGGAAGTTGCACGTGCCAAGAAGGGACCAGGGGATGACGACC AAACATACACCGGAGTGTATTCTATTTATTATTCCAGTTGCTAGTAGGGTCAAAACTTTA ATGCAGAGTGTATATGTGTTTCAGGGCAACGCGTGGAAAACCGGTTTGTGATTGTATACT TGGTAGTCAGCCCTTAGGAACAGGTATGTGTTTGTAGCAAGACTTACGACGTGAAATGAG GATTCTCTTGGGGACATTAATGG