Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d014568_T033
CDS Infomation	cds chromosome:B73_RefGen_v4:5:53709862:53720004:1 gene:Zm00001d014568 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA repair protein REV1
Sequence	ATGATTAAAAATTCCATCATGAATCACTCCATGAGGTTGGCTATGTTCAATGAGCAAAGC AACCTGAAATTCCTTGCAATTGCTGACACAAGATTTGCCTCTGCTATTGTGATGTTGAAG AGATTTATTGCTATAAAAGATGCTCTTTCAGTGATGGTAGCTGATGATTATCTGAGTAGT CTCTCTATCAAAGCACTTCCAGGCATTGGTCATACAGTTTCATCTAAACTGAAAAGCAAA GAAATTGAATATTGTAGTCAACTTCGCAATGTTTCAAAGGAAACAAAATCTGTGGGTGCC GAAATTAACTGGGGAGTCAGATTTAATGACAACAAAGATGCCGAACATTTTCTTAACAAC CTTTGCAAGGAGGTTTCTCTACGCTTGCAGGGTTGTGGAGTTCAGGGACGTACTATTACC CTTAAGGTGAAAACAAGAAGGGAAGGTGCTGGGGAACCAATAAAATATATGGGATGTGGT GACTGTGAAACCACGAGTCGTTCTATGACGATTGCAGGTGCAACTGACAGTTTTGTCACT CTCCAGAGAATTGCAAAACAATTATTTTCAGCTCTTCATCTTGGGACCAGCGGACTGAAG GATTTGAGATCTGGACCATCACATACAGCAGAAGCGAACCTTAGAAATGATAGGTCTACT GTATTTCACAATGTCGAGCTGCCTCCGTTGTCCCAACTTGATTTGGAGGTCCTGAAGAAC CTTCCCCCAGAGATAATGTCTGAAATGAATGAAATGTACAAGGGAGAATTACAAAGTCTT GTGGACACCCTCAATAGTGACAAGGGCAAGGAAAATAGTTCAAAATCTCTTGCTTTGCCT GCAGTTATTCGTAAGTCTGTACCTGCCGATGCAAAGCTTCAAGGATACAGAGACCACAGA GACTCCATGCATTTGGAGGAGGAACATACTAAGGGAAAATCTGACAAACAACTATCAGAA GCTAAACCAGCCAATAATGCTTCATGCTCAAGAGTTAGTGCATCAATTGAGAAAACAACA AAAAGTGTTACACAACTTGATTTGATGCCTGATTCGCTAAGCCAGGCAGATCTAACAGTT CTGCAGGAATTACCTGAGGATGTGAAGGCTGATTTGTTTAGTGCACTTCCACTGCATAGA TCAGGAGATCCTGCATGCAGCACTTCCAATGTATCTGAAAGTAAATCACCTAATGTGGTT AGAGCTGAAAATAGATCTTCTAATGATGGTGGAACTGATGATCTGAAAACCCCAAGGTCT TTTCTCCCACCAGGAAGTTCTCAAAAATGGATCGAACAGTTTAGAGTTAGCAGTTGCCTG ATTTTGAACGTAATTGCAGAGCAACACACAGATTCCAGCTGTCAACGACCATTGTCTTCT GTTCTAGAGCCTGTAGCTTCGTTCCTACCTTTGTGTCCTAACCCAGGTAGTGAAGAATGG AATGAAACTCATTCATGTCTCTCCGAGCTTCTTAGACACTACATACAACTGAAAGTTGAA TATGATATTGAAGAGCTCTACAAATGTTTTTGCCTTTTGAAAAGATTCTCGTCAGCATCA GAGTTTTTTCTGGATCTACATGATAGCATCCTTCCTTTCCTACAGGCCTGTTTGGATAAA CCCATCTCAATACATGTTGGATTCTATCAGCCAGCATTACGGTGGGACACTGCAATTCTA GCTCCTTGCTCAAGTTGTAGCCATTCTATTTTGCTAGAAAGGAAGAAGCAATGCCGTGAA TGTGCGGAGAGACGTGTTATGACAATCTGCGCCTCCAAGCAGCTACTCAAATCCCGTGCT GGCAGATTCCTTGGACGCGTTTATAACTTTATTATAACTAATTGA

Peptide Sequence

PEP ID	Zm00001d014568_P033
PEP Infomation	pep chromosome:B73_RefGen_v4:5:53709862:53720004:1 gene:Zm00001d014568 transcript:Zm00001d014568_T033 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA repair protein REV1
Sequence	MIKNSIMNHSMRLAMFNEQSNLKFLAIADTRFASAIVMLKRFIAIKDALSVMVADDYLSS LSIKALPGIGHTVSSKLKSKEIEYCSQLRNVSKETKSVGAEINWGVRFNDNKDAEHFLNN LCKEVSLRLQGCGVQGRTITLKVKTRREGAGEPIKYMGCGDCETTSRSMTIAGATDSFVT LQRIAKQLFSALHLGTSGLKDLRSGPSHTAEANLRNDRSTVFHNVELPPLSQLDLEVLKN LPPEIMSEMNEMYKGELQSLVDTLNSDKGKENSSKSLALPAVIRKSVPADAKLQGYRDHR DSMHLEEEHTKGKSDKQLSEAKPANNASCSRVSASIEKTTKSVTQLDLMPDSLSQADLTV LQELPEDVKADLFSALPLHRSGDPACSTSNVSESKSPNVVRAENRSSNDGGTDDLKTPRS FLPPGSSQKWIEQFRVSSCLILNVIAEQHTDSSCQRPLSSVLEPVASFLPLCPNPGSEEW NETHSCLSELLRHYIQLKVEYDIEELYKCFCLLKRFSSASEFFLDLHDSILPFLQACLDK PISIHVGFYQPALRWDTAILAPCSSCSHSILLERKKQCRECAERRVMTICASKQLLKSRA GRFLGRVYNFIITN

Transcript Sequence

Transcript ID	Zm00001d014568_T033
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:53709862:53720004:1 gene:Zm00001d014568 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA repair protein REV1
Sequence	ATGATTAAAAATTCCATCATGAATCACTCCATGAGGTTGGCTATGTTCAATGAGCAAAGC AACCTGAAATTCCTTGCAATTGCTGACACAAGATTTGCCTCTGCTATTGTGATGTTGAAG AGATTTATTGCTATAAAAGATGCTCTTTCAGTGATGGTAGCTGATGATTATCTGAGTAGT CTCTCTATCAAAGCACTTCCAGGCATTGGTCATACAGTTTCATCTAAACTGAAAAGCAAA GAAATTGAATATTGTAGTCAACTTCGCAATGTTTCAAAGGAAACAAAATCTGTGGGTGCC GAAATTAACTGGGGAGTCAGATTTAATGACAACAAAGATGCCGAACATTTTCTTAACAAC CTTTGCAAGGAGGTTTCTCTACGCTTGCAGGGTTGTGGAGTTCAGGGACGTACTATTACC CTTAAGGTGAAAACAAGAAGGGAAGGTGCTGGGGAACCAATAAAATATATGGGATGTGGT GACTGTGAAACCACGAGTCGTTCTATGACGATTGCAGGTGCAACTGACAGTTTTGTCACT CTCCAGAGAATTGCAAAACAATTATTTTCAGCTCTTCATCTTGGGACCAGCGGACTGAAG GATTTGAGATCTGGACCATCACATACAGCAGAAGCGAACCTTAGAAATGATAGGTCTACT GTATTTCACAATGTCGAGCTGCCTCCGTTGTCCCAACTTGATTTGGAGGTCCTGAAGAAC CTTCCCCCAGAGATAATGTCTGAAATGAATGAAATGTACAAGGGAGAATTACAAAGTCTT GTGGACACCCTCAATAGTGACAAGGGCAAGGAAAATAGTTCAAAATCTCTTGCTTTGCCT GCAGTTATTCGTAAGTCTGTACCTGCCGATGCAAAGCTTCAAGGATACAGAGACCACAGA GACTCCATGCATTTGGAGGAGGAACATACTAAGGGAAAATCTGACAAACAACTATCAGAA GCTAAACCAGCCAATAATGCTTCATGCTCAAGAGTTAGTGCATCAATTGAGAAAACAACA AAAAGTGTTACACAACTTGATTTGATGCCTGATTCGCTAAGCCAGGCAGATCTAACAGTT CTGCAGGAATTACCTGAGGATGTGAAGGCTGATTTGTTTAGTGCACTTCCACTGCATAGA TCAGGAGATCCTGCATGCAGCACTTCCAATGTATCTGAAAGTAAATCACCTAATGTGGTT AGAGCTGAAAATAGATCTTCTAATGATGGTGGAACTGATGATCTGAAAACCCCAAGGTCT TTTCTCCCACCAGGAAGTTCTCAAAAATGGATCGAACAGTTTAGAGTTAGCAGTTGCCTG ATTTTGAACGTAATTGCAGAGCAACACACAGATTCCAGCTGTCAACGACCATTGTCTTCT GTTCTAGAGCCTGTAGCTTCGTTCCTACCTTTGTGTCCTAACCCAGGTAGTGAAGAATGG AATGAAACTCATTCATGTCTCTCCGAGCTTCTTAGACACTACATACAACTGAAAGTTGAA TATGATATTGAAGAGCTCTACAAATGTTTTTGCCTTTTGAAAAGATTCTCGTCAGCATCA GAGTTTTTTCTGGATCTACATGATAGCATCCTTCCTTTCCTACAGGCCTGTTTGGATAAA CCCATCTCAATACATGTTGGATTCTATCAGCCAGCATTACGGTGGGACACTGCAATTCTA GCTCCTTGCTCAAGTTGTAGCCATTCTATTTTGCTAGAAAGGAAGAAGCAATGCCGTGAA TGTGCGGAGAGACGTGTTATGACAATCTGCGCCTCCAAGCAGCTACTCAAATCCCGTGCT GGCAGATTCCTTGGACGCGTTTATAACTTTATTATAACTAATTGATGCCAATGCTGGAAG TTTTATTGATATATTCATTGCATCTATGGATCAATAGATGCCATGTGGTTCGATATATCA TTCGTGGAGCAATGGTTTGAAGGGACCTTTGCTGTGCTTTGATGTTCCCAGGCGAATTTC ATGTTTGCTTCATAACCCATATGAATTTCATGTTATCTTTGTGTTGCTACCAAAAAGGTT CCTGGTTTGAAGTTCTTTGCGTCAAATTTTC