Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d014500_T024
CDS Infomation	cds chromosome:B73_RefGen_v4:5:50449120:50468400:-1 gene:Zm00001d014500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Structural maintenance of chromosomes protein 5
Sequence	ATGGCGGCACCGCGCGCCACCAAGCGCCCCAAGTTTGCCTCCGGCGCGGCGCCGCCCCAG CGAGGGGAGGACGACTACGTGCCGGGGAACATAGTAGAGATTGAGCTCTTCAACTTCATG ACCTACGACCGCCTCGTCTGCTGCCCCGGCCCGCGCCTCAACCTCGTCGTCGGGCCCAAC GGGTCTGGGAAGAGCTCGCTCGTCTGCGCCATCGCCCTCGGTCTCGCCGGAGACCCCAGC ATTCTCGGGAGGGCGTCCAGCGTGGGTGCATTTGTCAAGAGAGGGGAGGTTGCCGGGCAC GTCAAGATATCTCTCCGCGGGGATACAGCTGACGACAAGATCTGCGTTACTAGGAAAATT GATACGAAGAACAAGTCCGAGTGGCTCCTCAACGGTGCAACTGTCACAAAAAAGGAAGTT ATTGACGTGATTAAGAAATTCAATATTCAAGTTAACAACTTAACTCAGTTCTTGCCACAA GACCGGGTATCTGAATTTGCAAAGCTAAGTCCCATTCAACTTCTAGAAGAGACTGAAAAG GCTGTTGGTGACCCTGATTTACCTATTCAGCATCGCCAACTTGTAGAGAGAAGTAAGGAA CTGAAAGCGTTTGAAGTGGCTATAAGGCAAAACGAACAGACTTTGAATAATTTGAAGGCC CTCAATGCTGAACAAGAAAGAGATGTTGAGCGTGTTCGACTAAGAGATAATCTCCTTAGA AAGGCTGAATCAATGAAGAAGAAGGTGCCATGGCTGAAATACGACATGATGAAGAAGGAA TTCATAGAAGTGATACAAGAGAAGGAGAAAATTGCAAAGCAAGAAATGGAAGAAGCAGCT AGAGTCTGGGAAGATTCAAAAGGCCCTATTGACAAACTCAAGAAACACAAGGCAACTCAT ACTTCAAATATAAAGAAGATAAGCGGCCAAGTAAATCAAAACATGGACAACCGTCATAAA GTTATGGACCACGATTTAAAGCTGAATGCAGAACTGAAAGCTACATTTGATGAAATGGAT GACCTGAAAAAGCAAGAAAAATCTCGCCAGCGAAGGATCCTGAAAACTAAGGAAGATCTT GCTGCTGCTGAAAAGGAACTTGAAGATCTACAGCCTTATGAACTTCCTAAAGCTGAAATG GCACAACTAACAGACCAAATTGCACGAATAAGTGTTGAGATAAAAAACTTAAAAGCGGAA AGGAATGCCATGGAGTCTCAGTTAGCTCGAGAGGAAGAAAGCTTGAGGAGATGTTCTGAT AGGTTGAAGGAAATGGAAAGCAAGAATAGTAAGCTACTCCAAGCATTACGAAGTGCTGGT GCTGATAAAATTATTGAAGCATACCACTGGGTGCAAGCTAACAAAAAGAATCTCAGGCAA GAAGTTTACGGGCCTGTTCTCCTTGAGGTAAATGTTCAGGATAAGCTTCATGCCACTTAC TTGGAAGACCATGTTCCAAACTATTTATGGAAGTCATTCATCACTCTGGATGCTTCGGAC CGTGACTACATTGCTAGAGAAATGAAGCAGTATGGCATTCCTGTTCTGAACTACTTAGTG CGCGAAGGCACAAGGAGACGGCCATTAAACATCACTCCAGAGATGGAGCAACTTGGGATC TACTCCCGACTTGATCAAGTATTTCAAGCCCCTGACACTGTGAAAGATGTTTTGATTAGT CAGGCGGGTTTGGATGATTCGTACATAGGTACAGATGAAACTCATCGCAGAGCAGATGAG GTGTCAAAGCTAGGCATCTATGACTTTTGGACTCCGGATAATCATTATCGATGGTCCAAA TCAAGATATAGTGGTTATATGTCAGCATTTGTAGATGCAATCCATCCTTCTCGTCTCTTC AAGAGCAATCTGGATGTAAGCGGCATTGAAGATCTTCGACTTCAGAAAGAAGACCATGTA ACAAATATTGAAGGAATGCGTGAAGCTATAAAGACGCTTCATAGAAAACAGAGACAGTTA GAAGACGAAGAGGCAAATATACACAGGCAGAAGGAAGAAATTATTAATGCGATGAGATAC CACAAGAAGACACGAGAAGAGATACAAAGACGTGTTGATATCAAAAAGCGAATACTGAAG GACATATCCAGAGAAGACGATGTAGAATCCAGCACGAGAAAGCTTGTTAATCAGGTTGCT AAGATAAATGATGAGAGGTTTCATGCAATGATAAAACTTAAGGATTTGCTTACTGAAGCT GTTGCTCTCAAATGGAGTCACACAGAAAAGAATATGACTTTAATTGAGCTCGATACAAAG ATATGGGAGATGGAAAAGGGTGTGAAAAAACTTGAAAAGGATGCTAATCAGGCGGCTAGA AACTACGAAGATTGTAGAAGAATCACTCAGGAGCATAGGCGGAGGCTGTCTATTGCAAAA CAGAATGCAGAGTCGATAGCCATGATTACTAAAGACCTTGAAAAAGAGTTTTGTGCGGTA TAG

Peptide Sequence

PEP ID	Zm00001d014500_P024
PEP Infomation	pep chromosome:B73_RefGen_v4:5:50449120:50468400:-1 gene:Zm00001d014500 transcript:Zm00001d014500_T024 gene_biotype:protein_coding transcript_biotype:protein_coding description:Structural maintenance of chromosomes protein 5
Sequence	MAAPRATKRPKFASGAAPPQRGEDDYVPGNIVEIELFNFMTYDRLVCCPGPRLNLVVGPN GSGKSSLVCAIALGLAGDPSILGRASSVGAFVKRGEVAGHVKISLRGDTADDKICVTRKI DTKNKSEWLLNGATVTKKEVIDVIKKFNIQVNNLTQFLPQDRVSEFAKLSPIQLLEETEK AVGDPDLPIQHRQLVERSKELKAFEVAIRQNEQTLNNLKALNAEQERDVERVRLRDNLLR KAESMKKKVPWLKYDMMKKEFIEVIQEKEKIAKQEMEEAARVWEDSKGPIDKLKKHKATH TSNIKKISGQVNQNMDNRHKVMDHDLKLNAELKATFDEMDDLKKQEKSRQRRILKTKEDL AAAEKELEDLQPYELPKAEMAQLTDQIARISVEIKNLKAERNAMESQLAREEESLRRCSD RLKEMESKNSKLLQALRSAGADKIIEAYHWVQANKKNLRQEVYGPVLLEVNVQDKLHATY LEDHVPNYLWKSFITLDASDRDYIAREMKQYGIPVLNYLVREGTRRRPLNITPEMEQLGI YSRLDQVFQAPDTVKDVLISQAGLDDSYIGTDETHRRADEVSKLGIYDFWTPDNHYRWSK SRYSGYMSAFVDAIHPSRLFKSNLDVSGIEDLRLQKEDHVTNIEGMREAIKTLHRKQRQL EDEEANIHRQKEEIINAMRYHKKTREEIQRRVDIKKRILKDISREDDVESSTRKLVNQVA KINDERFHAMIKLKDLLTEAVALKWSHTEKNMTLIELDTKIWEMEKGVKKLEKDANQAAR NYEDCRRITQEHRRRLSIAKQNAESIAMITKDLEKEFCAV

Transcript Sequence

Transcript ID	Zm00001d014500_T024
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:50449120:50468400:-1 gene:Zm00001d014500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Structural maintenance of chromosomes protein 5
Sequence	ACCCAAACCCCTCCGCTCTACAATAGCCGAAACCCTAGCGGCCTTGCGCCGGCCATGGCG GCACCGCGCGCCACCAAGCGCCCCAAGTTTGCCTCCGGCGCGGCGCCGCCCCAGCGAGGG GAGGACGACTACGTGCCGGGGAACATAGTAGAGATTGAGCTCTTCAACTTCATGACCTAC GACCGCCTCGTCTGCTGCCCCGGCCCGCGCCTCAACCTCGTCGTCGGGCCCAACGGGTCT GGGAAGAGCTCGCTCGTCTGCGCCATCGCCCTCGGTCTCGCCGGAGACCCCAGCATTCTC GGGAGGGCGTCCAGCGTGGGTGCATTTGTCAAGAGAGGGGAGGTTGCCGGGCACGTCAAG ATATCTCTCCGCGGGGATACAGCTGACGACAAGATCTGCGTTACTAGGAAAATTGATACG AAGAACAAGTCCGAGTGGCTCCTCAACGGTGCAACTGTCACAAAAAAGGAAGTTATTGAC GTGATTAAGAAATTCAATATTCAAGTTAACAACTTAACTCAGTTCTTGCCACAAGACCGG GTATCTGAATTTGCAAAGCTAAGTCCCATTCAACTTCTAGAAGAGACTGAAAAGGCTGTT GGTGACCCTGATTTACCTATTCAGCATCGCCAACTTGTAGAGAGAAGTAAGGAACTGAAA GCGTTTGAAGTGGCTATAAGGCAAAACGAACAGACTTTGAATAATTTGAAGGCCCTCAAT GCTGAACAAGAAAGAGATGTTGAGCGTGTTCGACTAAGAGATAATCTCCTTAGAAAGGCT GAATCAATGAAGAAGAAGGTGCCATGGCTGAAATACGACATGATGAAGAAGGAATTCATA GAAGTGATACAAGAGAAGGAGAAAATTGCAAAGCAAGAAATGGAAGAAGCAGCTAGAGTC TGGGAAGATTCAAAAGGCCCTATTGACAAACTCAAGAAACACAAGGCAACTCATACTTCA AATATAAAGAAGATAAGCGGCCAAGTAAATCAAAACATGGACAACCGTCATAAAGTTATG GACCACGATTTAAAGCTGAATGCAGAACTGAAAGCTACATTTGATGAAATGGATGACCTG AAAAAGCAAGAAAAATCTCGCCAGCGAAGGATCCTGAAAACTAAGGAAGATCTTGCTGCT GCTGAAAAGGAACTTGAAGATCTACAGCCTTATGAACTTCCTAAAGCTGAAATGGCACAA CTAACAGACCAAATTGCACGAATAAGTGTTGAGATAAAAAACTTAAAAGCGGAAAGGAAT GCCATGGAGTCTCAGTTAGCTCGAGAGGAAGAAAGCTTGAGGAGATGTTCTGATAGGTTG AAGGAAATGGAAAGCAAGAATAGTAAGCTACTCCAAGCATTACGAAGTGCTGGTGCTGAT AAAATTATTGAAGCATACCACTGGGTGCAAGCTAACAAAAAGAATCTCAGGCAAGAAGTT TACGGGCCTGTTCTCCTTGAGGTAAATGTTCAGGATAAGCTTCATGCCACTTACTTGGAA GACCATGTTCCAAACTATTTATGGAAGTCATTCATCACTCTGGATGCTTCGGACCGTGAC TACATTGCTAGAGAAATGAAGCAGTATGGCATTCCTGTTCTGAACTACTTAGTGCGCGAA GGCACAAGGAGACGGCCATTAAACATCACTCCAGAGATGGAGCAACTTGGGATCTACTCC CGACTTGATCAAGTATTTCAAGCCCCTGACACTGTGAAAGATGTTTTGATTAGTCAGGCG GGTTTGGATGATTCGTACATAGGTACAGATGAAACTCATCGCAGAGCAGATGAGGTGTCA AAGCTAGGCATCTATGACTTTTGGACTCCGGATAATCATTATCGATGGTCCAAATCAAGA TATAGTGGTTATATGTCAGCATTTGTAGATGCAATCCATCCTTCTCGTCTCTTCAAGAGC AATCTGGATGTAAGCGGCATTGAAGATCTTCGACTTCAGAAAGAAGACCATGTAACAAAT ATTGAAGGAATGCGTGAAGCTATAAAGACGCTTCATAGAAAACAGAGACAGTTAGAAGAC GAAGAGGCAAATATACACAGGCAGAAGGAAGAAATTATTAATGCGATGAGATACCACAAG AAGACACGAGAAGAGATACAAAGACGTGTTGATATCAAAAAGCGAATACTGAAGGACATA TCCAGAGAAGACGATGTAGAATCCAGCACGAGAAAGCTTGTTAATCAGGTTGCTAAGATA AATGATGAGAGGTTTCATGCAATGATAAAACTTAAGGATTTGCTTACTGAAGCTGTTGCT CTCAAATGGAGTCACACAGAAAAGAATATGACTTTAATTGAGCTCGATACAAAGATATGG GAGATGGAAAAGGGTGTGAAAAAACTTGAAAAGGATGCTAATCAGGCGGCTAGAAACTAC GAAGATTGTAGAAGAATCACTCAGGAGCATAGGCGGAGGCTGTCTATTGCAAAACAGAAT GCAGAGTCGATAGCCATGATTACTAAAGACCTTGAAAAAGAGTTTTGTGCGGTATAGTTA AAATTTAGTTTGTGCAAACTTCATTCTGAACTTATGGTAGAATGCCAATTCATGACAATG GGTTGTGCTATCTGATTGGTTCCCTTTTTGAATTCTCCGACATGGCAATCATTAATTCAT CACACTATAAGCATTTCACCCAGATTTATCATGGCCATTACTATTGTCTGTTGTATTAGT AATAACAACTGAATTTTTACGTGATTATTGTGCCATTTTATCATCGAATCCTGTTTTTCT ACACCTTACTTGAATCTGCAATAATAGTTTAAGGAAATACAACACCTGCATTGCATGTTC AATCCATCACAAACTACCTTTCAATAAAATACGAGAAAAAAATGATTTCCAGCTTAAAGT TCTCACTGAAAATTAATACTTTGAGAGCCTTGTCATATTGTATACTAACCGTGTGAGGTT ATAGTTATACTAATAGAATCTTCTAGCACTGCTCTTAGTGGCATCATGAGCACTAATGCC CACTACCTTAGAAGAGCTCGAAACTGCAATACAAGATACTGAATCAGAGGCAAATTCTAT GCTATTTCTTAACCAAAATGTTTTGCAGGAGTATCAAAACCGGCAACATGAGGTATCAAA ATATGTCTGGTTCATATCCCCAATCTATATGGATTGAAGGGGATTGAGTGGGTTTCAATC CCTGGTAAGTCAAAATCTCTCCCCTCCAATCCATATGGAATGGAAATAACCTAACAAACC CTTACCGGGAACTGATACAAGAACAGCAGGATAGATCAGCTAACTTGCCCTCCATAGTCC ATTTATGCTCTGAGCTTCTTTCTTTGATTTATTTTCTGCTTTCTTAACTTATTTCTCAAG GATGCCTTTATAGTCCAGGTGCCTAACAACCTACTAACAAGTCTCCTTGTAAAATCTACT AACATCTTATCCATATAACCAATCAACCCTATCTGCTCCAAATTAATCCCTAAGCTGCTG TTGCTACACCATGTCCAGAGCCACAACCAGCCCACCAGCTGTTACTTGGGTGTACTCATG TTGTGGTCTTGTCATTTCTCAATAAATTGGGTAGTAGATGATGCCTTGGACAGTTGAACC ATCCAAAATAAAGTCAAATTTGAGTTGAACCTTGGGCAGTTCAACAGTTCATCTAATAGA ATCAATCTCAAATAAACTTAAGGATGATAAGGGTGAACATGAGATCTGCTGTTCTGAAAT CGAAACAGTAAAGGGTAAATGGCTTCCGACTCTGCGGATTCTTGTTTCAAAAATAAACGA CACATTCAGTCGTAACTTTCAAGAAATGGCAGTCGCTGGAGAAGTTTCACTGGATGAGCA CGGTATTGATTTTGATCACTATGGTATTCTTATAAAGGTGAAATTTAGGCAAACTAGTCA GCTGCAGGTGCTAAGCTCTCATCACCAATCTGGAGGGGAGCGATCTGTATCGACCATCTT GTATCTTGTGTCACTTCAAGATCTTACCAACTGCCCTTTTCGGGTTGTTGATGAGATAAA TCAAGGAATGGACCCCATAAACGAGAGGAAAATGTTTCAGCAGCTTGTCAGAGCTGCCAG CCAAATTAACACGCCGCAGTGCTTCCTTCTGACGCCCAAGCTCCTACCTGATCTGGAGTA CAGCGATGCCTGCAGCATTCTCAACATTATGAACGGCCCATGGATTGAGGAGCCAGCAAA AGCTTGGAGCTCCGGTGATTGTTGGAGGACAGTGGTCAGCGCAGCTGGACACTGAGCGCC GAGTATTTTGCCTTGGACCGTAGGAGGCTTGTAAAGTTTAGCGTGTAGAGCTGGATGCAG CTTTTGGGTGGTTAATTTAAGTTTGTAGTTGTACTACATGTAAGTTTAGGAAAGTTAAGG TAGCTGGTGGCATTATCAATGTGGAACCAGATGTTGAGCTGCTCAAATCACTTGGCAGCC CTTTTGACACGGGAGGGTAAGGTACTGTGGAATGATCCCTACCCTGTACCGGCCAGTATT CCTGGAAGTGACCAGTTTACT