Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d014419_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:45785643:45787979:-1 gene:Zm00001d014419 gene_biotype:protein_coding transcript_biotype:protein_coding description:BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66230.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes /.../ource: NCBI BLink).
Sequence	ATGGAGACGCCGCTGTCTTCCAGGAGGATCACCCGCTCGCTCGCCGCCGCATCTGCCCAG AAGAGCGCCGCCGCCGGGCCGGACTCCGCCGCCCTCTTCTCCCGCGCCAAGAACGCCGCC GCTGGGGAGACCCAGCCTCGCGCCGCCCTGCACGACATCACCAACGACTCCCCCATCGTC GGGCTCGCGGCGGGCGCCCTCCACGCCACCGATACCACCCCCGCCTCCACCGCCGCCAAG ACCCGCCGCAGGGCCCCGCGTCGCACGCCCGGCTCCGGGGAGGCGCTCCTGCGCGGCCAG GTCAAGGCGCTCCTCCACAAGGTCGAAGAGGAGCAGGGCTGCGCCGCCGCGGCCATCGTC AGGCCCGCGCGCATCCAGGCGCTGCTCGGTGTATCCAGGTCGCCGGCCCAGCTTCTTGCG CCGACGCCAGCCAACACGCCGCAGATCGAGCCCGTCCCCACTCCCAGGGAAGGTCTCCTC CTGCTTGATGGCGCTACGGTCGTGCCCTGCGTCCTAGACGAAGAGGAACTGCTGATTCCT AAGCTTCAGGTCATTGCAGCTTCCCTACCTCCACCTCATCAGGCAGAGGAGAAGCTCGGG GACTGCCAGCTGAACCGTGCGCTGGTGTTCGATGACTCCCCTGAGAAATGTGAAGAGTCC AGTGGATCAGCCGTCTCGTCAACCTTCTCCCTCCAGGAGAGCAGCACCGGCAGCTACGTG GACAAGTCATCATCACCTGAGGACGACAGCTCCTCTGCCTGGTCCATTCAGGTCCATGCC AGCTCTGAGAAGGGCGACGAAGAAGAGCTGGGCGTGGAGGAGCTGGCAGCAGAGTACACT GACGAAGAGGAGGAGGAGGAGGAGGAGGACTGGGACGAAGACAGCGATGACGACTGCTAC GATGATCTGTGCGAGGAGATGAGCAGGATGACCGTGTTGGAGGAGGAGGAGAAGAAGAAG ACCGTGCTGCCGCAGTTCGAGGGGAAGCACACCAGGTTCATCTACAACAGTGACGACGAG ATCGAGCGGGTGGAGGAGGCGGATGCAGCTGAGGCGACGGCGGAGCTTCGCGCATTGATG CTCAGGGGCCTGCTGGTGCCGGAGGGGAGGCACCTGCGCTTCCACGACGAGGATGCCGAC GAATAA

Peptide Sequence

PEP ID	Zm00001d014419_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:45785643:45787979:-1 gene:Zm00001d014419 transcript:Zm00001d014419_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66230.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes /.../ource: NCBI BLink).
Sequence	METPLSSRRITRSLAAASAQKSAAAGPDSAALFSRAKNAAAGETQPRAALHDITNDSPIV GLAAGALHATDTTPASTAAKTRRRAPRRTPGSGEALLRGQVKALLHKVEEEQGCAAAAIV RPARIQALLGVSRSPAQLLAPTPANTPQIEPVPTPREGLLLLDGATVVPCVLDEEELLIP KLQVIAASLPPPHQAEEKLGDCQLNRALVFDDSPEKCEESSGSAVSSTFSLQESSTGSYV DKSSSPEDDSSSAWSIQVHASSEKGDEEELGVEELAAEYTDEEEEEEEEDWDEDSDDDCY DDLCEEMSRMTVLEEEEKKKTVLPQFEGKHTRFIYNSDDEIERVEEADAAEATAELRALM LRGLLVPEGRHLRFHDEDADE

Transcript Sequence

Transcript ID	Zm00001d014419_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:45785643:45787979:-1 gene:Zm00001d014419 gene_biotype:protein_coding transcript_biotype:protein_coding description:BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66230.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes /.../ource: NCBI BLink).
Sequence	CTTGCACACCAGCAGCAACAAACCACGCAACGGCTAGTACGGAAGAAGAGGGGCGAGCGG CGAGCAGCGCCGTTCCGTCTTCGCCGTCTCCTCGTCCGTTCGCCAAGACAACGGTCATAT TACCGTTGTCCTGCCAAAATTCCAACACTTTAAAACTGCCACCCAACGCGCTCCTCCGCC GCCGTCTCCAGCACACGCTTCCCCTTCCCTCCCGCTCCCATTCACGTCGTCTCTTTCCTC GAGCCTCCGCTTCGCCAGCGACGCGCCCTTCTCACCCACCTCGCCGAGGAAGTATTCACC GATGGAGACGCCGCTGTCTTCCAGGAGGATCACCCGCTCGCTCGCCGCCGCATCTGCCCA GAAGAGCGCCGCCGCCGGGCCGGACTCCGCCGCCCTCTTCTCCCGCGCCAAGAACGCCGC CGCTGGGGAGACCCAGCCTCGCGCCGCCCTGCACGACATCACCAACGACTCCCCCATCGT CGGGCTCGCGGCGGGCGCCCTCCACGCCACCGATACCACCCCCGCCTCCACCGCCGCCAA GACCCGCCGCAGGGCCCCGCGTCGCACGCCCGGCTCCGGGGAGGCGCTCCTGCGCGGCCA GGTCAAGGCGCTCCTCCACAAGGTCGAAGAGGAGCAGGGCTGCGCCGCCGCGGCCATCGT CAGGCCCGCGCGCATCCAGGCGCTGCTCGGTGTATCCAGGTCGCCGGCCCAGCTTCTTGC GCCGACGCCAGCCAACACGCCGCAGATCGAGCCCGTCCCCACTCCCAGGGAAGGTCTCCT CCTGCTTGATGGCGCTACGGTCGTGCCCTGCGTCCTAGACGAAGAGGAACTGCTGATTCC TAAGCTTCAGGTCATTGCAGCTTCCCTACCTCCACCTCATCAGGCAGAGGAGAAGCTCGG GGACTGCCAGCTGAACCGTGCGCTGGTGTTCGATGACTCCCCTGAGAAATGTGAAGAGTC CAGTGGATCAGCCGTCTCGTCAACCTTCTCCCTCCAGGAGAGCAGCACCGGCAGCTACGT GGACAAGTCATCATCACCTGAGGACGACAGCTCCTCTGCCTGGTCCATTCAGGTCCATGC CAGCTCTGAGAAGGGCGACGAAGAAGAGCTGGGCGTGGAGGAGCTGGCAGCAGAGTACAC TGACGAAGAGGAGGAGGAGGAGGAGGAGGACTGGGACGAAGACAGCGATGACGACTGCTA CGATGATCTGTGCGAGGAGATGAGCAGGATGACCGTGTTGGAGGAGGAGGAGAAGAAGAA GACCGTGCTGCCGCAGTTCGAGGGGAAGCACACCAGGTTCATCTACAACAGTGACGACGA GATCGAGCGGGTGGAGGAGGCGGATGCAGCTGAGGCGACGGCGGAGCTTCGCGCATTGAT GCTCAGGGGCCTGCTGGTGCCGGAGGGGAGGCACCTGCGCTTCCACGACGAGGATGCCGA CGAATAAGAATCTCAGTTGTGTTGTCAAGTGGTTGGTTGTCTTTCGCTGACACCAGCCAA AATTCTTTTGCGGGGCTCTGAGTCCAGTTCTGTACGTTGATTCATGTCTCCGTTCTTAAG AGAAATAATCCAACTTTTCTGAAAATCAAAAATTTTGTGGCATTCGATTACATGGCAAGT CTTTTATGTGCTGTGTGCTATGTGGGAACTCTCATGTTTCTGATTTTTTTTGTACCTTCA AAT