Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d014413_T031
CDS Infomation	cds chromosome:B73_RefGen_v4:5:45129054:45149643:-1 gene:Zm00001d014413 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tel2-interacting protein1 description:ARM repeat superfamily protein
Sequence	ATGGCGATGGAGGCGTCGGCGGCCTCCGACGAAACCCTAGCCGCCGTCTTCGCCCAGCTC AAGCTCCACACCGTCGCTCTCCTCGACCTCCTCCGCACTCGCCGCCCCATCTCTAGCTCC GGCTCCTCCCTACGCGAAATGGCCGCTTTCCTCCGCGCCGCCCCGGCCCCGGCGCTGCAG CTCTGCTTCGATTATACAGTGTTTCCACTGCTCCTGCTCCTGGATGCGGCGGTGCAGTGC AGGAAGCAAGGCAATGCGCCGGGGCAGGTTGCAGGGGGCATTGATATAGGTGATGCCGTC GCCGAAGCTGGTCTGACCTGCCTTGAGGTCCTCCTCACCAAGTGCCACCTCACCTCGGTC AATCAGATGGTAGCAATGCTGAAAAAGTTGACTTCCGGGGCTATGCTTTCACCTTCAGAG GCTTCAGAGGAATTCCGTGGTGCAATTATTAGATGCTTCAGGGCTTTGGTTTTGCAGTTA CAGCCATGCTTGGACCATTTTTGTTCTTGCAAACACGGAATAGTGTTACCTACGATCCCA ACCAGTACATGCTTGGAGGTTAGAAGTGTAGTCCGCCCAAATCACTCTGCGCAGCCAGAG GAGTGCTTGCTTGCATTTCTTCAGTCTCAAAATGCTTCAGCTGCCGTAGGACATTGGCTC TCACTTCTTCTACAAGCATCAGAACTTGAGGCATCAAGGGGGCACCGGGGAAGTGCAGAT GTTAGGAAGGAATCATTGCACACGCTGCGCATTCTTATTGGCAAGGTAGGCTCTGCTGAT GCACTTGCCTTTTTCCTTCCTGGAATTGTCAGTCGCCTTGGGAAGGTTCTCTACACAGCT AAGACTATGATTAGTGGTGCTGCTGGGAGTTCTTTGAGCATTGAACAAGCCATTCTTGGA TTGACCGAGGCTTTGATGATAGTACTAAATGACAAGGAAAATCTTAGTGCACTTGGTAAG CACAAGAATGAGAATCATTCTGGTGGCAGTGAGTCAACTGAGCATATATTGCAGATGCTT CGCCAGTTGCCAACCAAAAATATATCTGATAAGATAAGCCATGATGAGATTACAGATGAT TCTGTCTCCAATGTCAATAATTCCTTTGCTGATAGAAAGGCACTGCATGTGAAGCGGACC AAAAAATGGCTTGAGGAAACAACTAGTAATGTTGATAAATTGCTGTCTGCTACATTCCCA CATCTTGCTATTCATTCATCTGAGAAGGTAAGGAAGGCAGTGGTTAGTGGTGTAAAAGGG CTTTTGTCTAGTTGCAGTTCTACATTAAAAAGAACCAAGATGCTACTTTTGGAATGTTTA TGTGTTCTGGCATGTGATGATGCTGCAGCTGTGTCTGAGGCTGCACAAGATGCTCTTGAT CATCTTTTCAACCAAGGCCACAATCTCGTAACAGAAAAGGAGATTTCTGATACCTTTACT AGGCTGGTTGAAAGGCTACCACAAGTGGTACTTGGAAGCGAGGAGACAACCGCACTTTCA CATGCTAGGATGTTGTTGGCTCTGACCTTTTATGCTGGTCCCCAGTTTCTGATAAATCAT CTTCACCGTTCTCCTGTCATTGCTGCTCGTTTCTTTGATTGTTTGGGTTTATGCATAGGT CATAGCTCACAGTTTTCTGGTTCCATGGACAAGCTAATTGTATCAAAGCCACTATCTATT GGGTATCTTTATTCAGTTGCTGAGTTGAAGAGTGGCGCCTATTCTAAAGATACAACTAAC ATATCTCTGCATGCCACGTCAACATCTGCAGCCTCCAAAATATCTGTTATCCATGATAAT GCTTTGCCAAATGCATTACTTGGTACAGTTGAATATGAGTTGCCCCATGTGCCTCCATGG TTTTTTCATGCTGGTAGCCAGAAGCTTTATGGGGTTCTTGCTGGAATAATTAGACTTGTT GGCCTATCAACAGTGTCAGGGGAAGGAACTGCTGCAACCTTGTCTCTCTTTGTTGATATT CTGCTTGATCAGTTTAGGAGGTTGAGCACTGAGCTGAGAGACAAAGATGTTTACAACGAT GGTCTGCAGCGGTGGTACATGAAAGGTGAAGCTGGACAAGCATTGCGCCAGGCTAGTTCA GCTGTCTGCATGCTCAATGAGCTCATGTATGGTTTGTCAGGTCGATCCCTTGGTATGTTT TTACAACTTTTCAGCAACGGATCAGCACAGATGCCAAGGACAGTTTGTCAGAAAAATCAA CTGCTTGCTTGTGTTAAACATAATGCAGTTACTAACAAAAGAGAAGTGTGGGGTTTTAGT GAACAAAAGGGCACTAAAGACAACATTCTTCATTGCATCAGCAGTATTCTGCATGAATAT GTATCACCAGAAGTGTGGGATCTTCCAACAGAGAAGGACACTGAGCTACACCTAATAGAG TTGAACCTGCCATTGCACTTCTACCGTGATACAACTGCATTGCACACAGTAGTGCTTGAA GGAATTGGAGTCTTGGGTGTTCTTCTTGGTCAAGATTTTGCACTTAGTGGGTTTATGCAC TCTTCCCTTTATCTTCTGCTCCGTGAACTTATCAGCTCAAGTGCTCAGATAAGAACTGCA TGTGATGCTGTCTTGAGAGCCCTTGCTACTGCTGGCGGTCATTGTTCGGTTGGCCAATTT GTCGTTGCGAATGCAGACTACATTATTGACTCTCTTTGCAGGCAATTGCGTCACCTGGAC CTGAACCCCCATGTCCCTGATGTTCTTGCTTCCATGCTATGTTACATCGGTGCTTCTCGT GATATCTTGCCATTCTTGGAAGAACCGATGCAATCAATTTCTTCTGAGCTTGAGGTACTT GGCAGGCATGATCACCCACGTCTAACTGTTCCATTTCTGAAGGCAGTTTCTGAGATTTCC AAGGCATGTAGACATGAATCCACTTGTTTGCCAGATGAGGCACAATCATTTTATGAGAAG GTCAGTTCTGAGGGTCAAGAAGTAAAAATTATGATTGAGAAGAGAATGGAATCCAGTGCA ATATCTGAAAGAAAGAATGTTGATGCTCGATCTTACTTTATGACCTTGGAATACTGGGAA GATTTATTTTGTAAGCTAAATGAGATGAGAAGATATAGGAGAATAGTTGGGTCTCTTGCG GGCTCTTGTTTATCAGCTGCCATCCCACTTCTCTCTTCCAATAAGGAAACAGCATGCCTT GTGGCCCTTGACATTGTGGAGAGTGCTGCTATATCTATTGCCAATGTTGAGGAGGCTTAT AAGTGTGAATGTCAAAGCAAAGGAGTCATTGAGGAGGCCATCCAGTTTTGTTCATTTGAC GAGCTTCTTGATGGTACAGATGCCACCGAAGATGTTGATGAAAATAGGCTACTCCCAGCA ATGAACAAACTGTGGCCTTACTTGGTTATCTGTCTAAGGAACAAGATCTCAGTGCCGGTT GTTAGGAAGTGCACCGAAATGTTGAGGCGAGCAATTTGCATATCTGGCGGCGATTTTTAT GTACGCAGGTTTCATAAGGATGGACCTATTGTTTGGAGGTTGCTGGCTTTATCTCCATTC CGACGTCTGTCAAAGATGGATGAAAAAGCAATCATTTTACCATATAGGGATACCTCACTT AACTCAGAGGAACCTATGGCTGAGATCTCCAGCCAAAAGATTCAGATTGCAGTCCTGGAC ATGATCGCTGCAATATCTTCGAACAAGAGAAGTGCTGTTGCACTAGAAAGCGTACTAAAG AAGGTCTGTGGCCTTGTGGTAGGCATTGCCTACAGTAGTTTGACAGGTTTGCAGGAAGCT GCTATAAGGGCATTGGCAGGCCTTGCCTGCATGGATGCTGATCTTGTCTGGCTTCTCCTT GCGGATGTGTACTACTCACTAAACCAAAGGGAATCTTTACTTCCCAACCAAGATCTAGCC CTGGTATCAGATCTTTTGCCCCCTCCAGTGTCTTCGAGAGAATACCTCTTTGTACAGTAT GGAGGTGAGGGTGTCAGGTGTGATGTAGATCCCTCATCTGTTCATTATGTGTTCAGAAGG ATGCAGGGTGTGTGA

Peptide Sequence

PEP ID	Zm00001d014413_P031
PEP Infomation	pep chromosome:B73_RefGen_v4:5:45129054:45149643:-1 gene:Zm00001d014413 transcript:Zm00001d014413_T031 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tel2-interacting protein1 description:ARM repeat superfamily protein
Sequence	MAMEASAASDETLAAVFAQLKLHTVALLDLLRTRRPISSSGSSLREMAAFLRAAPAPALQ LCFDYTVFPLLLLLDAAVQCRKQGNAPGQVAGGIDIGDAVAEAGLTCLEVLLTKCHLTSV NQMVAMLKKLTSGAMLSPSEASEEFRGAIIRCFRALVLQLQPCLDHFCSCKHGIVLPTIP TSTCLEVRSVVRPNHSAQPEECLLAFLQSQNASAAVGHWLSLLLQASELEASRGHRGSAD VRKESLHTLRILIGKVGSADALAFFLPGIVSRLGKVLYTAKTMISGAAGSSLSIEQAILG LTEALMIVLNDKENLSALGKHKNENHSGGSESTEHILQMLRQLPTKNISDKISHDEITDD SVSNVNNSFADRKALHVKRTKKWLEETTSNVDKLLSATFPHLAIHSSEKVRKAVVSGVKG LLSSCSSTLKRTKMLLLECLCVLACDDAAAVSEAAQDALDHLFNQGHNLVTEKEISDTFT RLVERLPQVVLGSEETTALSHARMLLALTFYAGPQFLINHLHRSPVIAARFFDCLGLCIG HSSQFSGSMDKLIVSKPLSIGYLYSVAELKSGAYSKDTTNISLHATSTSAASKISVIHDN ALPNALLGTVEYELPHVPPWFFHAGSQKLYGVLAGIIRLVGLSTVSGEGTAATLSLFVDI LLDQFRRLSTELRDKDVYNDGLQRWYMKGEAGQALRQASSAVCMLNELMYGLSGRSLGMF LQLFSNGSAQMPRTVCQKNQLLACVKHNAVTNKREVWGFSEQKGTKDNILHCISSILHEY VSPEVWDLPTEKDTELHLIELNLPLHFYRDTTALHTVVLEGIGVLGVLLGQDFALSGFMH SSLYLLLRELISSSAQIRTACDAVLRALATAGGHCSVGQFVVANADYIIDSLCRQLRHLD LNPHVPDVLASMLCYIGASRDILPFLEEPMQSISSELEVLGRHDHPRLTVPFLKAVSEIS KACRHESTCLPDEAQSFYEKVSSEGQEVKIMIEKRMESSAISERKNVDARSYFMTLEYWE DLFCKLNEMRRYRRIVGSLAGSCLSAAIPLLSSNKETACLVALDIVESAAISIANVEEAY KCECQSKGVIEEAIQFCSFDELLDGTDATEDVDENRLLPAMNKLWPYLVICLRNKISVPV VRKCTEMLRRAICISGGDFYVRRFHKDGPIVWRLLALSPFRRLSKMDEKAIILPYRDTSL NSEEPMAEISSQKIQIAVLDMIAAISSNKRSAVALESVLKKVCGLVVGIAYSSLTGLQEA AIRALAGLACMDADLVWLLLADVYYSLNQRESLLPNQDLALVSDLLPPPVSSREYLFVQY GGEGVRCDVDPSSVHYVFRRMQGV

Transcript Sequence

Transcript ID	Zm00001d014413_T031
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:45129054:45149643:-1 gene:Zm00001d014413 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tel2-interacting protein1 description:ARM repeat superfamily protein
Sequence	GGTATTGGAAAGCAGGCAAGCACAACAGCGATCCCACAAACCACAGCTCGGCTCCTCTTC GCCGTCGCAACCGATTTATATATGGCGATGGAGGCGTCGGCGGCCTCCGACGAAACCCTA GCCGCCGTCTTCGCCCAGCTCAAGCTCCACACCGTCGCTCTCCTCGACCTCCTCCGCACT CGCCGCCCCATCTCTAGCTCCGGCTCCTCCCTACGCGAAATGGCCGCTTTCCTCCGCGCC GCCCCGGCCCCGGCGCTGCAGCTCTGCTTCGATTATACAGTGTTTCCACTGCTCCTGCTC CTGGATGCGGCGGTGCAGTGCAGGAAGCAAGGCAATGCGCCGGGGCAGGTTGCAGGGGGC ATTGATATAGGTGATGCCGTCGCCGAAGCTGGTCTGACCTGCCTTGAGGTCCTCCTCACC AAGTGCCACCTCACCTCGGTCAATCAGATGGTAGCAATGCTGAAAAAGTTGACTTCCGGG GCTATGCTTTCACCTTCAGAGGCTTCAGAGGAATTCCGTGGTGCAATTATTAGATGCTTC AGGGCTTTGGTTTTGCAGTTACAGCCATGCTTGGACCATTTTTGTTCTTGCAAACACGGA ATAGTGTTACCTACGATCCCAACCAGTACATGCTTGGAGGTTAGAAGTGTAGTCCGCCCA AATCACTCTGCGCAGCCAGAGGAGTGCTTGCTTGCATTTCTTCAGTCTCAAAATGCTTCA GCTGCCGTAGGACATTGGCTCTCACTTCTTCTACAAGCATCAGAACTTGAGGCATCAAGG GGGCACCGGGGAAGTGCAGATGTTAGGAAGGAATCATTGCACACGCTGCGCATTCTTATT GGCAAGGTAGGCTCTGCTGATGCACTTGCCTTTTTCCTTCCTGGAATTGTCAGTCGCCTT GGGAAGGTTCTCTACACAGCTAAGACTATGATTAGTGGTGCTGCTGGGAGTTCTTTGAGC ATTGAACAAGCCATTCTTGGATTGACCGAGGCTTTGATGATAGTACTAAATGACAAGGAA AATCTTAGTGCACTTGGTAAGCACAAGAATGAGAATCATTCTGGTGGCAGTGAGTCAACT GAGCATATATTGCAGATGCTTCGCCAGTTGCCAACCAAAAATATATCTGATAAGATAAGC CATGATGAGATTACAGATGATTCTGTCTCCAATGTCAATAATTCCTTTGCTGATAGAAAG GCACTGCATGTGAAGCGGACCAAAAAATGGCTTGAGGAAACAACTAGTAATGTTGATAAA TTGCTGTCTGCTACATTCCCACATCTTGCTATTCATTCATCTGAGAAGGTAAGGAAGGCA GTGGTTAGTGGTGTAAAAGGGCTTTTGTCTAGTTGCAGTTCTACATTAAAAAGAACCAAG ATGCTACTTTTGGAATGTTTATGTGTTCTGGCATGTGATGATGCTGCAGCTGTGTCTGAG GCTGCACAAGATGCTCTTGATCATCTTTTCAACCAAGGCCACAATCTCGTAACAGAAAAG GAGATTTCTGATACCTTTACTAGGCTGGTTGAAAGGCTACCACAAGTGGTACTTGGAAGC GAGGAGACAACCGCACTTTCACATGCTAGGATGTTGTTGGCTCTGACCTTTTATGCTGGT CCCCAGTTTCTGATAAATCATCTTCACCGTTCTCCTGTCATTGCTGCTCGTTTCTTTGAT TGTTTGGGTTTATGCATAGGTCATAGCTCACAGTTTTCTGGTTCCATGGACAAGCTAATT GTATCAAAGCCACTATCTATTGGGTATCTTTATTCAGTTGCTGAGTTGAAGAGTGGCGCC TATTCTAAAGATACAACTAACATATCTCTGCATGCCACGTCAACATCTGCAGCCTCCAAA ATATCTGTTATCCATGATAATGCTTTGCCAAATGCATTACTTGGTACAGTTGAATATGAG TTGCCCCATGTGCCTCCATGGTTTTTTCATGCTGGTAGCCAGAAGCTTTATGGGGTTCTT GCTGGAATAATTAGACTTGTTGGCCTATCAACAGTGTCAGGGGAAGGAACTGCTGCAACC TTGTCTCTCTTTGTTGATATTCTGCTTGATCAGTTTAGGAGGTTGAGCACTGAGCTGAGA GACAAAGATGTTTACAACGATGGTCTGCAGCGGTGGTACATGAAAGGTGAAGCTGGACAA GCATTGCGCCAGGCTAGTTCAGCTGTCTGCATGCTCAATGAGCTCATGTATGGTTTGTCA GGTCGATCCCTTGGTATGTTTTTACAACTTTTCAGCAACGGATCAGCACAGATGCCAAGG ACAGTTTGTCAGAAAAATCAACTGCTTGCTTGTGTTAAACATAATGCAGTTACTAACAAA AGAGAAGTGTGGGGTTTTAGTGAACAAAAGGGCACTAAAGACAACATTCTTCATTGCATC AGCAGTATTCTGCATGAATATGTATCACCAGAAGTGTGGGATCTTCCAACAGAGAAGGAC ACTGAGCTACACCTAATAGAGTTGAACCTGCCATTGCACTTCTACCGTGATACAACTGCA TTGCACACAGTAGTGCTTGAAGGAATTGGAGTCTTGGGTGTTCTTCTTGGTCAAGATTTT GCACTTAGTGGGTTTATGCACTCTTCCCTTTATCTTCTGCTCCGTGAACTTATCAGCTCA AGTGCTCAGATAAGAACTGCATGTGATGCTGTCTTGAGAGCCCTTGCTACTGCTGGCGGT CATTGTTCGGTTGGCCAATTTGTCGTTGCGAATGCAGACTACATTATTGACTCTCTTTGC AGGCAATTGCGTCACCTGGACCTGAACCCCCATGTCCCTGATGTTCTTGCTTCCATGCTA TGTTACATCGGTGCTTCTCGTGATATCTTGCCATTCTTGGAAGAACCGATGCAATCAATT TCTTCTGAGCTTGAGGTACTTGGCAGGCATGATCACCCACGTCTAACTGTTCCATTTCTG AAGGCAGTTTCTGAGATTTCCAAGGCATGTAGACATGAATCCACTTGTTTGCCAGATGAG GCACAATCATTTTATGAGAAGGTCAGTTCTGAGGGTCAAGAAGTAAAAATTATGATTGAG AAGAGAATGGAATCCAGTGCAATATCTGAAAGAAAGAATGTTGATGCTCGATCTTACTTT ATGACCTTGGAATACTGGGAAGATTTATTTTGTAAGCTAAATGAGATGAGAAGATATAGG AGAATAGTTGGGTCTCTTGCGGGCTCTTGTTTATCAGCTGCCATCCCACTTCTCTCTTCC AATAAGGAAACAGCATGCCTTGTGGCCCTTGACATTGTGGAGAGTGCTGCTATATCTATT GCCAATGTTGAGGAGGCTTATAAGTGTGAATGTCAAAGCAAAGGAGTCATTGAGGAGGCC ATCCAGTTTTGTTCATTTGACGAGCTTCTTGATGGTACAGATGCCACCGAAGATGTTGAT GAAAATAGGCTACTCCCAGCAATGAACAAACTGTGGCCTTACTTGGTTATCTGTCTAAGG AACAAGATCTCAGTGCCGGTTGTTAGGAAGTGCACCGAAATGTTGAGGCGAGCAATTTGC ATATCTGGCGGCGATTTTTATGTACGCAGGTTTCATAAGGATGGACCTATTGTTTGGAGG TTGCTGGCTTTATCTCCATTCCGACGTCTGTCAAAGATGGATGAAAAAGCAATCATTTTA CCATATAGGGATACCTCACTTAACTCAGAGGAACCTATGGCTGAGATCTCCAGCCAAAAG ATTCAGATTGCAGTCCTGGACATGATCGCTGCAATATCTTCGAACAAGAGAAGTGCTGTT GCACTAGAAAGCGTACTAAAGAAGGTCTGTGGCCTTGTGGTAGGCATTGCCTACAGTAGT TTGACAGGTTTGCAGGAAGCTGCTATAAGGGCATTGGCAGGCCTTGCCTGCATGGATGCT GATCTTGTCTGGCTTCTCCTTGCGGATGTGTACTACTCACTAAACCAAAGGGAATCTTTA CTTCCCAACCAAGATCTAGCCCTGGTATCAGATCTTTTGCCCCCTCCAGTGTCTTCGAGA GAATACCTCTTTGTACAGTATGGAGGTGAGGGTGTCAGGTGTGATGTAGATCCCTCATCT GTTCATTATGTGTTCAGAAGGATGCAGGGTGTGTGATCTTGTGTGACCTGAAAATCAGGT TCCTGATACTGTGTATTTGTAATCTTGCTGAGTTTCTTTGGTCATGCTAGCACCCTATGT CACACATTGAACATAATATCACCTGCTACAGAGAATGCAAACATCAGGACTCATGATGAC AATGAAGGATGTGATGGGTTTGTATCTGTTAGCCATATAAGGTTGCACGTTAAGCATGCC CCTGACTTGCCGGACGAGCAGCAAGACTTCGGGACCTAGATTGGCTAAGGCACTAAGAAT AGAATAGCTTATCTACCGATATGTAAAGTCTTATTTCCACCTTTCGAATTCTTTTCCTCG GTAGCTAAGCTTATTTAGTTGCCTAATGGTCGATGTAATCTTTTTATTGTGTGATTCATT CCACTTTCAT