Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d014340_T013
CDS Infomation	cds chromosome:B73_RefGen_v4:5:41547454:41566798:-1 gene:Zm00001d014340 gene_biotype:protein_coding transcript_biotype:protein_coding description:Whole genome shotgun sequence of line PN40024 scaffold_7.assembly12x (Fragment)
Sequence	ATGTATGGGAAGTCTCTGCTTCATGAAGGTTCATGTGAGCCAAGGATTCAGGAAGTTGAA GCAGAAGTTCAGGAACCTTCAGTTCATCCTTGGGGAGGTCTTTCGACAACAAAGGATGGC ATCCTAACTCTTCTTGATTGCTTCATAAATGCAAAATCTCTTCATGTGATCCAGAATGTA TTTGACAATGCACGTGCGAGAGAACGTGAACGTGAGATGCTTTACCCTGATGCATGTGGT GGCGGTGGCAGAGGATGGATTAGCCCAGTGATACCTAACTATGGCAGGGGCCATGGAACA CGAGATACCTGTGCTTTGCACACTGCACACCTTTCTTGTGATACTCTGGTGGATTTTTGG TCGGCTCTGGGTGAAGAAACTAGATCATCTCTTTTAAGGATGAAAGAAGAGGACTTCATT GAAAGACTTATGCACAGATTCGACAGCAAGAGATTCTGCAGAGACTGCAGAAGGAATGTT ATTCGCGAATTCAAGGAGCTCAAGGAACTAAAACGCATGCGAAGGGAACCTCGCTGCACT AGTTGGTTTTGTGTTGCAGATACCACATTTAAGTGTGAGGTGTTCGAGGATGCTATTCTT GTTGATTGGCATCAATCTTTATTGGAGCAAGATGGAATATACCATCATTTCGAGTGGGCT ATTGGAACAGATGAAGGAAAATCTGATATTCTAAACTTTGAAAATGTGGGCATGAATGGA CAAGTCCACAGGAAAGGCCTCGATCTTGATCACTTTGAAGACTATTTTGTTACACTGAGA GCATGGAGGCTGGATGGTCGCTGTACTGAATTCTGTGTGAAGGCGCATGCCTTGAAGGGC CAATCATGTGTTCACCGGAGGCTAATTGTGGGGGATGGATTTGTGACAATTACCAAAGGT GAAAGTATTAGAAGTTTCTTTGAGTATGCTGAAGAAGCAGAGGAAGAGGATGAAGATGAT GTAGTGGACAGAGACAGCAATGACCCTGATGGTGATATCGCTCATCCACAGAAGCATGCC AAGAGCCCTGAACTTGCAAGAGAATTTCTCCTGGATGCTGCTGCTGTTATCTTCAAAGAA CAGATTGAGAAGGCTTTCAGAGAAGGCACAGCGCGGCAAAATGCACATAGCGTTTTCGTG TCCCTTGCTCTAAAACTGTTAGAAGAACGAGTTCATGTTGCCTGCAAGGAAATAATTACA TTGGAAAAACAGACCAAGCTTCTTGAGGAAGAAGAGAAAGAAAAGCGTGAAGAAGAGGAG CGCAGGGAGAGGAGGAGAACAAAAGAAAGAGAAAAGAAGAATAGAAGAAAAGAGAGGCTG AAAGGAAAGGACAGAGATAAGGAAAAAACACTGGTTCGGTCAAAAAAACCAGATCTTTCA CCATTTTCTCTGTGCAGCCAAGCAACACCAAGTAATAATGAGTCTCAGGATGTTCTAGAC TTGAGATATTCAGATAGTGAAGAGGAAGACAATGTTGTGGTCGGGGAACACTATCCTGAT TCCTCTGCTGATCAATCTTCAAGCAAGGACAGTGATGAACGAAGCAATGGGCATGAATGC AGTGTAACAATAGAATTTGTTCCCTCAGATTGTGATAGCTCATTCTTATGTGATGAGCCT AAATCATCAAGAAACCTGAGATTTAGAAGAGACTTCCCTGAAGAGAAAGATGCTAGTTAT TGGCATGAGGGTTGCTGTGATGATTCTGGAGATACTCAATGGCAGTCTAGAGAGAGGACC AGAAATAACACTAGAAATTATAACTCTGTATTTAATACAAATAACCGTACAAGAGACAGG TACAACCCCTGCAGCTGTAGCCATCAAGAAGACTACAGATATTTTACCACAGCAACTAGA TCAAGTAGGGAGACAAAGATGCCCAGGAAAACAGTGGCTGAGAAGCCCAGGTTGCAATAC CGCAGGTGCTATCCTCCGGATAGCTTTGCTGTGTCAAATGGAGGACGTGTTGGTGGTACA CCAAACAAAAACCCAGGTCCAAAACAAGTATGGGAGCCAATGGATGCAAGAAAGAAGACA GGGAATGGGAATAGTGCTACTGGGGCTGCTGATGGTTCAGATCAAGTAGAATGCTCAAAT AATATCAGTGAATGTGAAAAGCTTGAGGCAGTGTGTGACTCTCTTGTTGAAATTTGTTCT GAGATATCTGCGGAAACCTGTAAGTCAGACACAGATCAACCATGGAGACAAGGTGAGAAG AATCAGTCTGCTTGCAGCGATGAATCTAAATGCGTGGATAAGCCAAATTGCTCCAAGGAC ACTGGTAGGACGACAAACTTAACCACTTCGGATAGCTCCTCGTGTCTAAGTGAGGGAGAT AGAGACAGCAGCATGACCTCACTGAGTGTTCAGAATGTAGAATCTTCATCTGCATCTGAT TCAGAAGAGTCTTCAGACAGGAACAATAGCAGCCCAGGCGATATACCAGCGAAGAATGTT TCTCGTACATTACTTGAGATGTGTGCAGGAAATGGTTTCAGAGAGTACCAACCAAAAGGC TTGAACCCTCCTAATGGTAACCAATTTGGATTTATGGTGGCCCCTTCACAGGAGCAGATG TTATACCAACAGAAGGTCCATGCACCGCCGTACTCGTCACCATTCATGGGGTTCCACAAT CACCCCTTGGCAGTTCCAACAAATGGGTACTTACCATATACTCAGCCAGGTCACTTCTAC CCTGCTTCTATGACCCCTGTTGGATATGGAGTTGCTGGTGACCAATGTGTCGACTTCTCG ATGCAGTACAGAAATAACATTCATCCTTACTCGGGTCCTGAATTTGGTTTTCTGCCTTCA CAGCCAGTTCACAAGACCTCAGTGAACTTCCATGCGGTACCAGTGACACCACTGACCCCG TTGTGTAGCCGCGGAATGCCAGTGGCGACAAATCAAGAGAGGCAGCAGAGTCCTGCCCTC TTCCCTAAATTAAAACAGGCAGTGCTGGTCCCTGAGACCGTCTGTGCAGGAGACAACACC TTCAAACAGAAAGGCGATGACGTAGACAGCACACCCTTCTCCTTGTTCCAGTTCAACCTG CCGATTGCCCCTCCCACCCTGGCAACATCCAAAGAGCGAAGTGGGGAACTGGCACCAGCT CAGATAGCTCGAGTCCAGCCGTGCTCGAGGGAGGAGACCAACGTCAAGGAATACAACATT TTCTCTGGGTGTGACGGGGTGATGTTTCAGCTCAACTAG

Peptide Sequence

PEP ID	Zm00001d014340_P013
PEP Infomation	pep chromosome:B73_RefGen_v4:5:41547454:41566798:-1 gene:Zm00001d014340 transcript:Zm00001d014340_T013 gene_biotype:protein_coding transcript_biotype:protein_coding description:Whole genome shotgun sequence of line PN40024 scaffold_7.assembly12x (Fragment)
Sequence	MYGKSLLHEGSCEPRIQEVEAEVQEPSVHPWGGLSTTKDGILTLLDCFINAKSLHVIQNV FDNARAREREREMLYPDACGGGGRGWISPVIPNYGRGHGTRDTCALHTAHLSCDTLVDFW SALGEETRSSLLRMKEEDFIERLMHRFDSKRFCRDCRRNVIREFKELKELKRMRREPRCT SWFCVADTTFKCEVFEDAILVDWHQSLLEQDGIYHHFEWAIGTDEGKSDILNFENVGMNG QVHRKGLDLDHFEDYFVTLRAWRLDGRCTEFCVKAHALKGQSCVHRRLIVGDGFVTITKG ESIRSFFEYAEEAEEEDEDDVVDRDSNDPDGDIAHPQKHAKSPELAREFLLDAAAVIFKE QIEKAFREGTARQNAHSVFVSLALKLLEERVHVACKEIITLEKQTKLLEEEEKEKREEEE RRERRRTKEREKKNRRKERLKGKDRDKEKTLVRSKKPDLSPFSLCSQATPSNNESQDVLD LRYSDSEEEDNVVVGEHYPDSSADQSSSKDSDERSNGHECSVTIEFVPSDCDSSFLCDEP KSSRNLRFRRDFPEEKDASYWHEGCCDDSGDTQWQSRERTRNNTRNYNSVFNTNNRTRDR YNPCSCSHQEDYRYFTTATRSSRETKMPRKTVAEKPRLQYRRCYPPDSFAVSNGGRVGGT PNKNPGPKQVWEPMDARKKTGNGNSATGAADGSDQVECSNNISECEKLEAVCDSLVEICS EISAETCKSDTDQPWRQGEKNQSACSDESKCVDKPNCSKDTGRTTNLTTSDSSSCLSEGD RDSSMTSLSVQNVESSSASDSEESSDRNNSSPGDIPAKNVSRTLLEMCAGNGFREYQPKG LNPPNGNQFGFMVAPSQEQMLYQQKVHAPPYSSPFMGFHNHPLAVPTNGYLPYTQPGHFY PASMTPVGYGVAGDQCVDFSMQYRNNIHPYSGPEFGFLPSQPVHKTSVNFHAVPVTPLTP LCSRGMPVATNQERQQSPALFPKLKQAVLVPETVCAGDNTFKQKGDDVDSTPFSLFQFNL PIAPPTLATSKERSGELAPAQIARVQPCSREETNVKEYNIFSGCDGVMFQLN

Transcript Sequence

Transcript ID	Zm00001d014340_T013
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:41547454:41566798:-1 gene:Zm00001d014340 gene_biotype:protein_coding transcript_biotype:protein_coding description:Whole genome shotgun sequence of line PN40024 scaffold_7.assembly12x (Fragment)
Sequence	AACTCACCAGAGAAGAGAAATCCTTCTCCCTCGTCTCTCGCCAATCTTTTCTATCAAACC CTCTTCCTTCCATCTCAGATCCCTCTCCCGTCCCAGCTCGATCCTGCCCGATGGCCACCG GATCGTACGCCGCTTCCGTCCGACGCTGAGCAACCAGGACAACGACCTCCGACGACCCCC CGAGCACCCACGAGATGGTCGCGGAGGCGGCGCCGTTCTCCTCATCGGCGATCTGGTCGT GTCACCGCGACGAGATCACCTTCGACCGCCTCCACAAGGTACCGCCCCTCCCGGGCTCGC CCCGATCGGATCTGCTCACCCGCCCACCTGCCCGCCCGCCCGCCTGCTGACCCTGGACCG AGTCGACGCCACGGATCTGAGGCTCCCGCCCTCCTCCCCGTGCTGCGATGCTGGGCCCTT CCGGCGCCCCTGCCCGTGCTCCGACGTTCCGCGGAGCTTTTGGTCGCGCCCGGTGGATGG CGCTTCCTGCGAGCGCTGGTTTCGGCTGTAGGGTTTGATTTGATTTGTTGCTCGCCTGTT GGAGAATTCTATTAGGTTGGACTGCTTCGGCTTATCAGTTGGCGCGGACTTCCTGTGGTG ATGTCGGGTGTTGCATGGAGCAGACAAGCGCTTGACTGAAAAATCTGAGTGGTTTGTCCC ATTTGGATATTTGGATGTGTTGAATTGAGTTGAGGGAGCTATCTCCGTTATGATGCTGCT ATGCAAGCTGTCTAGAGAAGTGGGAGCAGCCTGAATTTGAAAAGTATTGTGAAAAGCAAT AAATAATAGCTAACTTCTTGACTGACTCATCAGATTGGCTTGTCTTGCCTCTGGACAAAC AGAAGGAATGAAGGATGCTCTAGGCTGAATCCCATACTACTGGTGTCGTTGCTGCTAATC GAGGAGCAATGATGTCAACAAACCAAACTTTGGAGAGTATTAACTCCATCCTGGTTTGAT CAGCCAGCTTCTTGACTAAAGCATTGGATTGGTTTGTCTCATTCAGGCACAGGGATGGGA TGTGTTCGAGCCATTATAGGTGACATTGCTGCTGTGTAACTGATCATAGCTGTGACACAG ACAATCTGGATTCTTAGGAGTGCTTATTGGTGCTTGGTTAGGGCAATATATGGACTAGGA AATCATTGCAACCCATGACTTAACAATTGCACTTGTTTGCGGTTGTCACACTATTTACCT ATACCTAGGGGTCATATGTGTGTTCCTCTTCCATTTCATTATATTTACTGTTAGGTTGGC CAACAAACATTTTAGTGTATGTTGAGGCGACCATATTTTCTAATCAGCTTCTGGTCTGAG TAGTGTGGAGTACTGATGCGCCAGATGACGTAGATACCTTATTTAGAAAGGGTCATGTGT TGGTAAATGATTATAAAATTTATTGGAGCTGTGTTAATGCAATGTGTTGCTCTGTAAAGT TTTGCTATTTAGGCGTTCAATGCACTATACTACTTTTACATTTTCTCAAAGAGAGCTCAT GATTGGCATGATACTGTACATTGAATTGATCGTTAATTGCAATTTATTTCTTGAATGCAC TGTCTGCTTTCTTCAGCTCTGAGATGTGCAATAATGTTTTTTATGCATACTATCAGAGTT ATGTCAGTTTTGAAGTTCAGAGTTGAATACTGCAACTGATAGTTTATTCCTGTGAATTTA ATTTGTTCCAGTTTTGGAGTGCCCTGTCACCTCATGCACGACATGAGCTGTTAAGACTTG ATAAACAGACCCTTATTGAGCATGCTCGCAAGAATTTGTACTGTTCAAGGTGTAATGGGT TGCTTTTGGAAAGTTTCACACAAATAGTCATGTATGGGAAGTCTCTGCTTCATGAAGGTT CATGTGAGCCAAGGATTCAGGAAGTTGAAGCAGAAGTTCAGGAACCTTCAGTTCATCCTT GGGGAGGTCTTTCGACAACAAAGGATGGCATCCTAACTCTTCTTGATTGCTTCATAAATG CAAAATCTCTTCATGTGATCCAGAATGTATTTGACAATGCACGTGCGAGAGAACGTGAAC GTGAGATGCTTTACCCTGATGCATGTGGTGGCGGTGGCAGAGGATGGATTAGCCCAGTGA TACCTAACTATGGCAGGGGCCATGGAACACGAGATACCTGTGCTTTGCACACTGCACACC TTTCTTGTGATACTCTGGTGGATTTTTGGTCGGCTCTGGGTGAAGAAACTAGATCATCTC TTTTAAGGATGAAAGAAGAGGACTTCATTGAAAGACTTATGCACAGATTCGACAGCAAGA GATTCTGCAGAGACTGCAGAAGGAATGTTATTCGCGAATTCAAGGAGCTCAAGGAACTAA AACGCATGCGAAGGGAACCTCGCTGCACTAGTTGGTTTTGTGTTGCAGATACCACATTTA AGTGTGAGGTGTTCGAGGATGCTATTCTTGTTGATTGGCATCAATCTTTATTGGAGCAAG ATGGAATATACCATCATTTCGAGTGGGCTATTGGAACAGATGAAGGAAAATCTGATATTC TAAACTTTGAAAATGTGGGCATGAATGGACAAGTCCACAGGAAAGGCCTCGATCTTGATC ACTTTGAAGACTATTTTGTTACACTGAGAGCATGGAGGCTGGATGGTCGCTGTACTGAAT TCTGTGTGAAGGCGCATGCCTTGAAGGGCCAATCATGTGTTCACCGGAGGCTAATTGTGG GGGATGGATTTGTGACAATTACCAAAGGTGAAAGTATTAGAAGTTTCTTTGAGTATGCTG AAGAAGCAGAGGAAGAGGATGAAGATGATGTAGTGGACAGAGACAGCAATGACCCTGATG GTGATATCGCTCATCCACAGAAGCATGCCAAGAGCCCTGAACTTGCAAGAGAATTTCTCC TGGATGCTGCTGCTGTTATCTTCAAAGAACAGATTGAGAAGGCTTTCAGAGAAGGCACAG CGCGGCAAAATGCACATAGCGTTTTCGTGTCCCTTGCTCTAAAACTGTTAGAAGAACGAG TTCATGTTGCCTGCAAGGAAATAATTACATTGGAAAAACAGACCAAGCTTCTTGAGGAAG AAGAGAAAGAAAAGCGTGAAGAAGAGGAGCGCAGGGAGAGGAGGAGAACAAAAGAAAGAG AAAAGAAGAATAGAAGAAAAGAGAGGCTGAAAGGAAAGGACAGAGATAAGGAAAAAACAC TGGTTCGGTCAAAAAAACCAGATCTTTCACCATTTTCTCTGTGCAGCCAAGCAACACCAA GTAATAATGAGTCTCAGGATGTTCTAGACTTGAGATATTCAGATAGTGAAGAGGAAGACA ATGTTGTGGTCGGGGAACACTATCCTGATTCCTCTGCTGATCAATCTTCAAGCAAGGACA GTGATGAACGAAGCAATGGGCATGAATGCAGTGTAACAATAGAATTTGTTCCCTCAGATT GTGATAGCTCATTCTTATGTGATGAGCCTAAATCATCAAGAAACCTGAGATTTAGAAGAG ACTTCCCTGAAGAGAAAGATGCTAGTTATTGGCATGAGGGTTGCTGTGATGATTCTGGAG ATACTCAATGGCAGTCTAGAGAGAGGACCAGAAATAACACTAGAAATTATAACTCTGTAT TTAATACAAATAACCGTACAAGAGACAGGTACAACCCCTGCAGCTGTAGCCATCAAGAAG ACTACAGATATTTTACCACAGCAACTAGATCAAGTAGGGAGACAAAGATGCCCAGGAAAA CAGTGGCTGAGAAGCCCAGGTTGCAATACCGCAGGTGCTATCCTCCGGATAGCTTTGCTG TGTCAAATGGAGGACGTGTTGGTGGTACACCAAACAAAAACCCAGGTCCAAAACAAGTAT GGGAGCCAATGGATGCAAGAAAGAAGACAGGGAATGGGAATAGTGCTACTGGGGCTGCTG ATGGTTCAGATCAAGTAGAATGCTCAAATAATATCAGTGAATGTGAAAAGCTTGAGGCAG TGTGTGACTCTCTTGTTGAAATTTGTTCTGAGATATCTGCGGAAACCTGTAAGTCAGACA CAGATCAACCATGGAGACAAGGTGAGAAGAATCAGTCTGCTTGCAGCGATGAATCTAAAT GCGTGGATAAGCCAAATTGCTCCAAGGACACTGGTAGGACGACAAACTTAACCACTTCGG ATAGCTCCTCGTGTCTAAGTGAGGGAGATAGAGACAGCAGCATGACCTCACTGAGTGTTC AGAATGTAGAATCTTCATCTGCATCTGATTCAGAAGAGTCTTCAGACAGGAACAATAGCA GCCCAGGCGATATACCAGCGAAGAATGTTTCTCGTACATTACTTGAGATGTGTGCAGGAA ATGGTTTCAGAGAGTACCAACCAAAAGGCTTGAACCCTCCTAATGGTAACCAATTTGGAT TTATGGTGGCCCCTTCACAGGAGCAGATGTTATACCAACAGAAGGTCCATGCACCGCCGT ACTCGTCACCATTCATGGGGTTCCACAATCACCCCTTGGCAGTTCCAACAAATGGGTACT TACCATATACTCAGCCAGGTCACTTCTACCCTGCTTCTATGACCCCTGTTGGATATGGAG TTGCTGGTGACCAATGTGTCGACTTCTCGATGCAGTACAGAAATAACATTCATCCTTACT CGGGTCCTGAATTTGGTTTTCTGCCTTCACAGCCAGTTCACAAGACCTCAGTGAACTTCC ATGCGGTACCAGTGACACCACTGACCCCGTTGTGTAGCCGCGGAATGCCAGTGGCGACAA ATCAAGAGAGGCAGCAGAGTCCTGCCCTCTTCCCTAAATTAAAACAGGCAGTGCTGGTCC CTGAGACCGTCTGTGCAGGAGACAACACCTTCAAACAGAAAGGCGATGACGTAGACAGCA CACCCTTCTCCTTGTTCCAGTTCAACCTGCCGATTGCCCCTCCCACCCTGGCAACATCCA AAGAGCGAAGTGGGGAACTGGCACCAGCTCAGATAGCTCGAGTCCAGCCGTGCTCGAGGG AGGAGACCAACGTCAAGGAATACAACATTTTCTCTGGGTGTGACGGGGTGATGTTTCAGC TCAACTAGAGACGAAGAAAATTGAGCAGCTATTCAATATACAGCGTTACATGGTGAGTGA TTTGTATTCTCGTAAAACAGAATAAGGTAGATCGAGGTT