Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014338_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:41448867:41449913:-1 gene:Zm00001d014338 gene_biotype:protein_coding transcript_biotype:protein_coding description:F-box/kelch-repeat protein SKIP30
Sequence

ATGCCATCAACCTTACTTGATGATCTCCCTAACGAAGTTGCTCTCCAGTGCCTTGCACGG
GTACCATTCTTGTTCCATCCGACGCTTCAGTTGGTTTGCCGCTCTTGGCGAGCATCAGTT
TGCAGTGGCGAACTTCTCAAAATTCGTAACCAGATTGGTACGACAGAAGAGCTCTTGTGT
GTGTTGGCGTTTGAACCAGAAAACATGTGGCAACTTTATGATCCCCTACGAGACAAGTGG
ATAACTCTTCCTGTCATGCCATCTCAGATTAGGAACATAGCCCGCTTTGGCGTGGCCTCA
GTTGCTGGCAAGCTCTATGTAATTGGTGGTGGCAGTGATCGAGTTGATCCGCTTACTGGA
GATCACGACAGGATCTTTGCAAGCAATGAGGTTTGGTCTTATGATCCGCTGCACCGTGTG
TGGTCCCAGAGGGCTCCTATGCTTGTGGCTCGAGCGATGTTTGCTTGTTGTGCACTGGAT
GGGAAAATAATCGTTGCAGGAGGCTTCACTAACTGCCGCAAATCGATATCAAAGGCTGAG
ATCTATGACCCTGAAGCTGGCATATGGGAGCCTCTTCCTGACCTTCGTCTGGCTCATAGC
TCTGCATGTACTGGACTTGTCATCAAGGGTAAGATGCATGTATTGCATAAAGGTCTATCG
ACAGTTCAGATTCTGGAAGATGGTGGCAGTCATTGGGCTGTTGAGGATTTCTCTTGGTTG
CAAGGCCCGATGGCGATGGTCGGTGGAGAGCTGTATGTGCTGAGTAACAGCTGTATTATG
AAGCAACGTGGTGAGAACTTCCCTGATAAGATGGTATCGTGTGCATCTGAGTTCCAGAGC
AGGATCGGTTTCGGGATGATTGGTGTGGGTGACAACATATATTTGGTTGGAGGAGTGATT
GGACCTGGGCCGAGAAACCAATGCATCAAGCTGCTCTCTGATGTTGATATCTTGAACGTC
ACAAGTGAGAGACCAACCTGGAGACCAGGGTCGCCGATGACGCATTGCCGAGGGAGCATC
TGTGGCTGCGCTTTGTTGAGGATTTAG

Peptide Sequence

PEP ID

Zm00001d014338_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:41448867:41449913:-1 gene:Zm00001d014338 transcript:Zm00001d014338_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:F-box/kelch-repeat protein SKIP30
Sequence

MPSTLLDDLPNEVALQCLARVPFLFHPTLQLVCRSWRASVCSGELLKIRNQIGTTEELLC
VLAFEPENMWQLYDPLRDKWITLPVMPSQIRNIARFGVASVAGKLYVIGGGSDRVDPLTG
DHDRIFASNEVWSYDPLHRVWSQRAPMLVARAMFACCALDGKIIVAGGFTNCRKSISKAE
IYDPEAGIWEPLPDLRLAHSSACTGLVIKGKMHVLHKGLSTVQILEDGGSHWAVEDFSWL
QGPMAMVGGELYVLSNSCIMKQRGENFPDKMVSCASEFQSRIGFGMIGVGDNIYLVGGVI
GPGPRNQCIKLLSDVDILNVTSERPTWRPGSPMTHCRGSICGCALLRI

Transcript Sequence

Transcript ID

Zm00001d014338_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:41448867:41449913:-1 gene:Zm00001d014338 gene_biotype:protein_coding transcript_biotype:protein_coding description:F-box/kelch-repeat protein SKIP30
Sequence

ATGCCATCAACCTTACTTGATGATCTCCCTAACGAAGTTGCTCTCCAGTGCCTTGCACGG
GTACCATTCTTGTTCCATCCGACGCTTCAGTTGGTTTGCCGCTCTTGGCGAGCATCAGTT
TGCAGTGGCGAACTTCTCAAAATTCGTAACCAGATTGGTACGACAGAAGAGCTCTTGTGT
GTGTTGGCGTTTGAACCAGAAAACATGTGGCAACTTTATGATCCCCTACGAGACAAGTGG
ATAACTCTTCCTGTCATGCCATCTCAGATTAGGAACATAGCCCGCTTTGGCGTGGCCTCA
GTTGCTGGCAAGCTCTATGTAATTGGTGGTGGCAGTGATCGAGTTGATCCGCTTACTGGA
GATCACGACAGGATCTTTGCAAGCAATGAGGTTTGGTCTTATGATCCGCTGCACCGTGTG
TGGTCCCAGAGGGCTCCTATGCTTGTGGCTCGAGCGATGTTTGCTTGTTGTGCACTGGAT
GGGAAAATAATCGTTGCAGGAGGCTTCACTAACTGCCGCAAATCGATATCAAAGGCTGAG
ATCTATGACCCTGAAGCTGGCATATGGGAGCCTCTTCCTGACCTTCGTCTGGCTCATAGC
TCTGCATGTACTGGACTTGTCATCAAGGGTAAGATGCATGTATTGCATAAAGGTCTATCG
ACAGTTCAGATTCTGGAAGATGGTGGCAGTCATTGGGCTGTTGAGGATTTCTCTTGGTTG
CAAGGCCCGATGGCGATGGTCGGTGGAGAGCTGTATGTGCTGAGTAACAGCTGTATTATG
AAGCAACGTGGTGAGAACTTCCCTGATAAGATGGTATCGTGTGCATCTGAGTTCCAGAGC
AGGATCGGTTTCGGGATGATTGGTGTGGGTGACAACATATATTTGGTTGGAGGAGTGATT
GGACCTGGGCCGAGAAACCAATGCATCAAGCTGCTCTCTGATGTTGATATCTTGAACGTC
ACAAGTGAGAGACCAACCTGGAGACCAGGGTCGCCGATGACGCATTGCCGAGGGAGCATC
TGTGGCTGCGCTTTGTTGAGGATTTAG